| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797184
Identifier: 108797184
GI number: 108797184
Start: 225912
End: 227156
Strand: Reverse
Name: 108797184
Synonym: Mmcs_0204
Alternate gene names: NA
Gene position: 227156-225912 (Counterclockwise)
Preceding gene: 108797185
Following gene: 108797181
Centisome position: 3.98
GC content: 69.16
Gene sequence:
>1245_bases ATGGCTAGGCGGCGCTTCCCCCTTCTGCGGGCGGTGGCCGAACTGGTCAACGCCGCCAACGGCGTCCGCCCGTTGGGCCG GGACGGGTACATCACCCTGCCGGTGTTCGCGTTCGGCTGGCCCACCACCGAGGCGGCGCCGCTGTACCTCGCCGGTTCGA TGCTCGACGCCGGGCGCCGAGGACTGCGGGGCGACTTCCGCGGCGGCCGCGGTCGGATCGCGTTGCTGGTCACCGCCGTC GCGTGGGCGTTGCTGGGCGTGATCATCCGCCGCAACGTCACCTCGAAGCGCTACTTCGACGAACCGCTGCGCGAGACGCT CGGCGACGACTACGAGATGGTCGCCGCGCGGGCGCAACCGGCCCGCCCGCGCAACCTGATCGGGGTCCCGCCCAACGAGT TGACCCGGCGGCGCTACGTCGAGAAAGCGGGCACCGTGCAGTACGGCCCGCACCCGAAGGTGAACTTCGCCGACATCTGG CGGCGTTCGGACCTCCCCAGAGACGGGCGCGCCCCGGTGCTGCTGCAGGTGCCCGGCGGTGCGTGGGCGATCGGCATGCG CCGTCCCCAGGCCTATCCGATGTTGAGCCACATGGCCGAACAGGGGTGGATCGGTGTCTCGATCGACTATCGCGTGAGTC CGCGACACACGTGGCCCGATCACATCGTCGACGTCAAGCGGGCGTTGGCCTGGATCAAGGAACACATCGCCGAGTACGGC GGCGATCCGGACTTCGTCGCGATCACCGGCGGTTCGGCAGGCGGACACCTGGCCTCCCTGGTCGCGCTGACGCCGAACGA TCCCCAGTACCAACCCGGTTTCGAGGACGCCGACACGTCGGTGGTCGCCGCCGTGCCGATCTACGGCCGCTACGACTGGT TCAGTGTCGAAGGTCCCGGCCGCCGGGAGTTCATCGCGTTCCTGCAGAAATTCGTGGTGAAGAAGCGAATTCTGGAGCAT CGCCAGGAGTACCTCGACGCATCCCCCATCACCCGCGTGCGGCCGGACGCCCCGCCGTTCTTCGTGCTCCACGGCCAGGA CGACTCGATCATCCCCGTGGGCGAGGGACGCGAGTTCGTCGACGCCCTGCGCGCGGTGTCCAGATCGGTGGTCGCCTACG CCGAGATCCCGCATGCCCAACACGCATTCGACTTCTTCGGATCTCCCCGGGCGCACTACACCGCCAACGCGGTGGATCAG TTCCTGTCGTGGGTGAACGCCACCCGCGCCCGGGCCGTCGCCTAG
Upstream 100 bases:
>100_bases GACACAGCACGTTCGAGAGAATCTGGCGACACACAAGTGCTCCGAAACATCACAGCGCCCGACGAATCACCCCGCAACGA CGTTGGCACCGAGGTGTCCG
Downstream 100 bases:
>100_bases CCGGCTACGGCGCCATCGCCGTCTCGACCACCGTCAACTCGTCGGAAAGTCCTGCGGCCGTGCGGATCTCGACGAACGCC TCGACCATGGCGTCGGTGAG
Product: LipO
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Domain-Containing Protein; Lipase; Lipase/Esterase; Esterase/Lipase; Esterase/Lipase-Like Protein; Esterase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Alpha/Beta Hydrolase Fold Domain Protein; Esterase/Lipase/Thioesterase; Esterase/Lipase/Thioesterase Family Protein; Esterase LipO; Triacylglycerol Lipase; Esterase/Lipase-Like; Carboxylesterase LipQ; Carboxylesterase Family Protein; Hydrolase; Esterase LipC; Lipoprotein; Pectinesterase; Membrane-Bound Esterase LipM; N-Acetylanthranilate Amidase; Alpha/Beta Hydrolase Fold Protein-3 Domain Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Lipase/Esterase LipN; Membrane-Anchored Peptidase; Alpha/Beta Hydrolase Fold Family Protein; Coagulation Factor 5/8 Type Domain Protein; Dienelactone Hydrolase; Carboxylesterase; Peptidase; Alpha/Beta Hydrolase Protein; Lipase LipH; Peptidase S9A/B/C Families; Esterase LipM; Hydrolase Alpha/Beta Domain Protein
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MARRRFPLLRAVAELVNAANGVRPLGRDGYITLPVFAFGWPTTEAAPLYLAGSMLDAGRRGLRGDFRGGRGRIALLVTAV AWALLGVIIRRNVTSKRYFDEPLRETLGDDYEMVAARAQPARPRNLIGVPPNELTRRRYVEKAGTVQYGPHPKVNFADIW RRSDLPRDGRAPVLLQVPGGAWAIGMRRPQAYPMLSHMAEQGWIGVSIDYRVSPRHTWPDHIVDVKRALAWIKEHIAEYG GDPDFVAITGGSAGGHLASLVALTPNDPQYQPGFEDADTSVVAAVPIYGRYDWFSVEGPGRREFIAFLQKFVVKKRILEH RQEYLDASPITRVRPDAPPFFVLHGQDDSIIPVGEGREFVDALRAVSRSVVAYAEIPHAQHAFDFFGSPRAHYTANAVDQ FLSWVNATRARAVA
Sequences:
>Translated_414_residues MARRRFPLLRAVAELVNAANGVRPLGRDGYITLPVFAFGWPTTEAAPLYLAGSMLDAGRRGLRGDFRGGRGRIALLVTAV AWALLGVIIRRNVTSKRYFDEPLRETLGDDYEMVAARAQPARPRNLIGVPPNELTRRRYVEKAGTVQYGPHPKVNFADIW RRSDLPRDGRAPVLLQVPGGAWAIGMRRPQAYPMLSHMAEQGWIGVSIDYRVSPRHTWPDHIVDVKRALAWIKEHIAEYG GDPDFVAITGGSAGGHLASLVALTPNDPQYQPGFEDADTSVVAAVPIYGRYDWFSVEGPGRREFIAFLQKFVVKKRILEH RQEYLDASPITRVRPDAPPFFVLHGQDDSIIPVGEGREFVDALRAVSRSVVAYAEIPHAQHAFDFFGSPRAHYTANAVDQ FLSWVNATRARAVA >Mature_413_residues ARRRFPLLRAVAELVNAANGVRPLGRDGYITLPVFAFGWPTTEAAPLYLAGSMLDAGRRGLRGDFRGGRGRIALLVTAVA WALLGVIIRRNVTSKRYFDEPLRETLGDDYEMVAARAQPARPRNLIGVPPNELTRRRYVEKAGTVQYGPHPKVNFADIWR RSDLPRDGRAPVLLQVPGGAWAIGMRRPQAYPMLSHMAEQGWIGVSIDYRVSPRHTWPDHIVDVKRALAWIKEHIAEYGG DPDFVAITGGSAGGHLASLVALTPNDPQYQPGFEDADTSVVAAVPIYGRYDWFSVEGPGRREFIAFLQKFVVKKRILEHR QEYLDASPITRVRPDAPPFFVLHGQDDSIIPVGEGREFVDALRAVSRSVVAYAEIPHAQHAFDFFGSPRAHYTANAVDQF LSWVNATRARAVA
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46033; Mature: 45902
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRRFPLLRAVAELVNAANGVRPLGRDGYITLPVFAFGWPTTEAAPLYLAGSMLDAGRR CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEHHHHHHHCC GLRGDFRGGRGRIALLVTAVAWALLGVIIRRNVTSKRYFDEPLRETLGDDYEMVAARAQP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCC ARPRNLIGVPPNELTRRRYVEKAGTVQYGPHPKVNFADIWRRSDLPRDGRAPVLLQVPGG CCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCC AWAIGMRRPQAYPMLSHMAEQGWIGVSIDYRVSPRHTWPDHIVDVKRALAWIKEHIAEYG EEEECCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC GDPDFVAITGGSAGGHLASLVALTPNDPQYQPGFEDADTSVVAAVPIYGRYDWFSVEGPG CCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCC RREFIAFLQKFVVKKRILEHRQEYLDASPITRVRPDAPPFFVLHGQDDSIIPVGEGREFV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHH DALRAVSRSVVAYAEIPHAQHAFDFFGSPRAHYTANAVDQFLSWVNATRARAVA HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARRRFPLLRAVAELVNAANGVRPLGRDGYITLPVFAFGWPTTEAAPLYLAGSMLDAGRR CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEHHHHHHHCC GLRGDFRGGRGRIALLVTAVAWALLGVIIRRNVTSKRYFDEPLRETLGDDYEMVAARAQP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCC ARPRNLIGVPPNELTRRRYVEKAGTVQYGPHPKVNFADIWRRSDLPRDGRAPVLLQVPGG CCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCC AWAIGMRRPQAYPMLSHMAEQGWIGVSIDYRVSPRHTWPDHIVDVKRALAWIKEHIAEYG EEEECCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC GDPDFVAITGGSAGGHLASLVALTPNDPQYQPGFEDADTSVVAAVPIYGRYDWFSVEGPG CCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCC RREFIAFLQKFVVKKRILEHRQEYLDASPITRVRPDAPPFFVLHGQDDSIIPVGEGREFV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHH DALRAVSRSVVAYAEIPHAQHAFDFFGSPRAHYTANAVDQFLSWVNATRARAVA HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA