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The map label for this gene is fadE25 [H]

Identifier: 108797181

GI number: 108797181

Start: 220908

End: 223076

Strand: Reverse

Name: fadE25 [H]

Synonym: Mmcs_0201

Alternate gene names: 108797181

Gene position: 223076-220908 (Counterclockwise)

Preceding gene: 108797184

Following gene: 108797180

Centisome position: 3.91

GC content: 72.38

Gene sequence:

>2169_bases
GTGCGCAAATCCGCCCTGGCGATCACCGACGACCACATCGCGCTCGCCGAATCCGCGCAAGGTCGGCTCGACCGCTCGGG
GTCACGGGCCGCCGCCAGGGCCACACTCGAGGGCGGCGCGGCGCACCCGGCCGACCTGTGGCGGGCCGCCGCTGACCTGG
GATGGCACGGTCTGGCGGTCGCCGAACAGTTCGGCGGAGCCGGTTTCGGCCTCTCGGAGTTGGCGGTCGTGCTGGAGATG
CAGGGCCGCGACCTCACACCCGGACCGTTCCTGCCGTCGGTGGCGGCTTCGGTGGTGCTCGACCGGTGCGCAGGCGACGA
CGTGCGGGCCGAGCTGCTGCCCGGGCTGTCGAGCGGCGCCACCGTCGCGGCGCTGGGCCTGACCGGCACGCTGACGGTGG
GTGCCGCCGGATCGGTGGCCGGCAAATGCCCCGCGGTGCTCGGCGCACCCGACGCCGACCTGCTGGTTCTCGTGGCAGAC
GAAGACGTGGTGGTGCTCGACGCGAAGGACGCCGGCGTCACCGTCACCGCGCTGGACGGGATCGACACCACCCGCAGCAT
CGGCACCGTCGCCGTGCGTGACGTCCACGTGCCTGCCGGACGGGTACTGACCGGGGCGGCGCGGCGGGCTCAGACGGTGT
TCCGCATCCTCGGCGCGGCCGAGGCGGCGGGTGTGGGGTGGGCGTGCCTGGACATGGCCGTCGAGTACGCGAAGGTGCGT
GAACAGTTCGGCCGCACCATCGGCACCTTCCAGGCCGTCAAGCACCACGCGGCGAACATGCTCGTCGACGCCGAGCAGAC
CACCGCGGCGGTGTGGGACGCCACGCGGGCCGACGACCTCGACAGCGCGTGGTTTCCCGCCGCGGTCGCCGCATCGCATG
CCATCCGCGCGTCGGTGTTACTGGCGCAGAACAACATTCAGTTGCACGGCGGCATCGCCTTCACCTGGGAGCATGACGCC
CACCTGTATCTGCGGCGGGCACGCTCACTGGCCGCGCTGCTGGCCGACGGCACCGATCCGCTGGTCGACATCGTCGAAGC
GCAGCGCAGCGGTCGGGCGCGCGGCGCCTCCTTCGCGCTGCCCGCCGAGGCCGACGAGTACCGGGCGGCCGCGCGCGCGG
CCGCCGCCGAGTGGGCCGCGCTGCCGCCGGACCGCCGGCGCGACTTCCTCGTCGACTCCGGATATCTGGTGCCGCACTGG
CCGAAACCGTGGGGCCGGGCCGCCGGGACGCTCGAACAGCTCGTCATCGAGGAGGAGTTCCGCGATGTCGACATCCCCGA
TATGGGGATCACCGGATGGGTGACGCTGACGATCGCCCAGGCCGGCACGGACGATCAGCGTGAGCGCTGGGTGGAGCCGG
TACTGCGCGGTGAGGTGATGTGGTGCCAGCTGTTCTCCGAACCCGGCGCCGGATCGGACGCCGCGGCGGTGCGGACCGCC
GCCAAACGCGTCGACGGCGGCTGGCGGGTGACCGGGCAGAAGGTGTGGACGAGCCTGGCCCACCTGTGCCAGTGGGGTCT
GGCCACTGTGCGCACCGATCCGGACGCGCCCAAACACGCCGGGGTGACGATGATGGCCATCGACATGTCCGCCGACGGTG
TGACGGTCAACCCGCTGCGCGGCCTCACCGGCGACTCCCACTTCAACGAGGTGTTCTTCGACGACGTGTTCGTGCCCGAC
GCCGACGTGGTCGGTGACGTGAACAGGGGCTGGCTGGTGGCCCGCGCGACGCTGGGCAACGAGCGGATCTCGATCGGCGG
CGGCTCCGGTGCGCCGACCGGGTTCTCGGCCGACGACCTGGTGGCACTGCTCGACAGCGCACCCGCCGACGTCGCCGCCG
CGCACGTGCGGCGCGCCGGTGCGGTGATCGCCGAGGCCCATACGCTGCGGCTGCTCAACCTGCGCAGGGCCAGCCGGGCC
ATCGCCGGTGCCGAACCGGGGCCCGAGGGCAACGTCACCAAACTGCTGGTCGCCGAACAGTGCCAGAGGCAGACCGAACT
GGGGATGGACCTGGCGGGCACGGCCGCCGTGGTCGGGGGCGCTCCGACCTTGACCCGCGCGTATCTCGGCAACCGGGCGA
TGACGATCGCCGGCGGCACCTCGGAGATCACCCGCAACACCATCGCCGAACGCATCCTCGGCCTGCCCCGCGATCCGCTG
CTGAGGTAA

Upstream 100 bases:

>100_bases
ATTTCGACAGCGATTTTGTAACGTCGCTCACACCTTCGCTGACCGGCGGTTATGGGTTAGCGTCAGCCGAAAGACCCGAA
AAAAACTCGAAGGACGCACC

Downstream 100 bases:

>100_bases
CCCGCCCCACTTTCCGCCGAGACTGCGGGGAGATCACGATTCGCGCGCCGCATGCGATCTCCCCGCAGTCTCGGCGCGTC
TGCTTGCGTGCGGTATTACT

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 722; Mature: 722

Protein sequence:

>722_residues
MRKSALAITDDHIALAESAQGRLDRSGSRAAARATLEGGAAHPADLWRAAADLGWHGLAVAEQFGGAGFGLSELAVVLEM
QGRDLTPGPFLPSVAASVVLDRCAGDDVRAELLPGLSSGATVAALGLTGTLTVGAAGSVAGKCPAVLGAPDADLLVLVAD
EDVVVLDAKDAGVTVTALDGIDTTRSIGTVAVRDVHVPAGRVLTGAARRAQTVFRILGAAEAAGVGWACLDMAVEYAKVR
EQFGRTIGTFQAVKHHAANMLVDAEQTTAAVWDATRADDLDSAWFPAAVAASHAIRASVLLAQNNIQLHGGIAFTWEHDA
HLYLRRARSLAALLADGTDPLVDIVEAQRSGRARGASFALPAEADEYRAAARAAAAEWAALPPDRRRDFLVDSGYLVPHW
PKPWGRAAGTLEQLVIEEEFRDVDIPDMGITGWVTLTIAQAGTDDQRERWVEPVLRGEVMWCQLFSEPGAGSDAAAVRTA
AKRVDGGWRVTGQKVWTSLAHLCQWGLATVRTDPDAPKHAGVTMMAIDMSADGVTVNPLRGLTGDSHFNEVFFDDVFVPD
ADVVGDVNRGWLVARATLGNERISIGGGSGAPTGFSADDLVALLDSAPADVAAAHVRRAGAVIAEAHTLRLLNLRRASRA
IAGAEPGPEGNVTKLLVAEQCQRQTELGMDLAGTAAVVGGAPTLTRAYLGNRAMTIAGGTSEITRNTIAERILGLPRDPL
LR

Sequences:

>Translated_722_residues
MRKSALAITDDHIALAESAQGRLDRSGSRAAARATLEGGAAHPADLWRAAADLGWHGLAVAEQFGGAGFGLSELAVVLEM
QGRDLTPGPFLPSVAASVVLDRCAGDDVRAELLPGLSSGATVAALGLTGTLTVGAAGSVAGKCPAVLGAPDADLLVLVAD
EDVVVLDAKDAGVTVTALDGIDTTRSIGTVAVRDVHVPAGRVLTGAARRAQTVFRILGAAEAAGVGWACLDMAVEYAKVR
EQFGRTIGTFQAVKHHAANMLVDAEQTTAAVWDATRADDLDSAWFPAAVAASHAIRASVLLAQNNIQLHGGIAFTWEHDA
HLYLRRARSLAALLADGTDPLVDIVEAQRSGRARGASFALPAEADEYRAAARAAAAEWAALPPDRRRDFLVDSGYLVPHW
PKPWGRAAGTLEQLVIEEEFRDVDIPDMGITGWVTLTIAQAGTDDQRERWVEPVLRGEVMWCQLFSEPGAGSDAAAVRTA
AKRVDGGWRVTGQKVWTSLAHLCQWGLATVRTDPDAPKHAGVTMMAIDMSADGVTVNPLRGLTGDSHFNEVFFDDVFVPD
ADVVGDVNRGWLVARATLGNERISIGGGSGAPTGFSADDLVALLDSAPADVAAAHVRRAGAVIAEAHTLRLLNLRRASRA
IAGAEPGPEGNVTKLLVAEQCQRQTELGMDLAGTAAVVGGAPTLTRAYLGNRAMTIAGGTSEITRNTIAERILGLPRDPL
LR
>Mature_722_residues
MRKSALAITDDHIALAESAQGRLDRSGSRAAARATLEGGAAHPADLWRAAADLGWHGLAVAEQFGGAGFGLSELAVVLEM
QGRDLTPGPFLPSVAASVVLDRCAGDDVRAELLPGLSSGATVAALGLTGTLTVGAAGSVAGKCPAVLGAPDADLLVLVAD
EDVVVLDAKDAGVTVTALDGIDTTRSIGTVAVRDVHVPAGRVLTGAARRAQTVFRILGAAEAAGVGWACLDMAVEYAKVR
EQFGRTIGTFQAVKHHAANMLVDAEQTTAAVWDATRADDLDSAWFPAAVAASHAIRASVLLAQNNIQLHGGIAFTWEHDA
HLYLRRARSLAALLADGTDPLVDIVEAQRSGRARGASFALPAEADEYRAAARAAAAEWAALPPDRRRDFLVDSGYLVPHW
PKPWGRAAGTLEQLVIEEEFRDVDIPDMGITGWVTLTIAQAGTDDQRERWVEPVLRGEVMWCQLFSEPGAGSDAAAVRTA
AKRVDGGWRVTGQKVWTSLAHLCQWGLATVRTDPDAPKHAGVTMMAIDMSADGVTVNPLRGLTGDSHFNEVFFDDVFVPD
ADVVGDVNRGWLVARATLGNERISIGGGSGAPTGFSADDLVALLDSAPADVAAAHVRRAGAVIAEAHTLRLLNLRRASRA
IAGAEPGPEGNVTKLLVAEQCQRQTELGMDLAGTAAVVGGAPTLTRAYLGNRAMTIAGGTSEITRNTIAERILGLPRDPL
LR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958414, Length=360, Percent_Identity=25.8333333333333, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI211971008, Length=298, Percent_Identity=26.510067114094, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI48976061, Length=298, Percent_Identity=26.510067114094, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI4557233, Length=285, Percent_Identity=27.0175438596491, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI226958412, Length=332, Percent_Identity=25.9036144578313, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI187960098, Length=259, Percent_Identity=25.8687258687259, Blast_Score=75, Evalue=3e-13,
Organism=Homo sapiens, GI4557231, Length=259, Percent_Identity=25.8687258687259, Blast_Score=75, Evalue=3e-13,
Organism=Homo sapiens, GI38505218, Length=287, Percent_Identity=24.7386759581882, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI4557235, Length=152, Percent_Identity=32.8947368421053, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI76496475, Length=152, Percent_Identity=32.8947368421053, Blast_Score=70, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17551932, Length=151, Percent_Identity=30.4635761589404, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17506239, Length=205, Percent_Identity=28.780487804878, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17505929, Length=155, Percent_Identity=30.9677419354839, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=196, Percent_Identity=29.5918367346939, Blast_Score=77, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17508101, Length=335, Percent_Identity=25.0746268656716, Blast_Score=76, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17570075, Length=401, Percent_Identity=23.4413965087282, Blast_Score=72, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17538396, Length=295, Percent_Identity=25.0847457627119, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17569725, Length=351, Percent_Identity=24.2165242165242, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24646207, Length=296, Percent_Identity=26.0135135135135, Blast_Score=74, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281363737, Length=153, Percent_Identity=32.6797385620915, Blast_Score=70, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21356377, Length=149, Percent_Identity=28.8590604026846, Blast_Score=68, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24660351, Length=153, Percent_Identity=25.4901960784314, Blast_Score=66, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 75498; Mature: 75498

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSALAITDDHIALAESAQGRLDRSGSRAAARATLEGGAAHPADLWRAAADLGWHGLAV
CCCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHHHCCCCHHHH
AEQFGGAGFGLSELAVVLEMQGRDLTPGPFLPSVAASVVLDRCAGDDVRAELLPGLSSGA
HHHCCCCCCCHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC
TVAALGLTGTLTVGAAGSVAGKCPAVLGAPDADLLVLVADEDVVVLDAKDAGVTVTALDG
EEEEECCCEEEEECCCCCCCCCCCEEECCCCCCEEEEEECCCEEEEECCCCCEEEEEECC
IDTTRSIGTVAVRDVHVPAGRVLTGAARRAQTVFRILGAAEAAGVGWACLDMAVEYAKVR
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EQFGRTIGTFQAVKHHAANMLVDAEQTTAAVWDATRADDLDSAWFPAAVAASHAIRASVL
HHHCHHHHHHHHHHHHHHHHEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEE
LAQNNIQLHGGIAFTWEHDAHLYLRRARSLAALLADGTDPLVDIVEAQRSGRARGASFAL
EEECCEEEECCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEC
PAEADEYRAAARAAAAEWAALPPDRRRDFLVDSGYLVPHWPKPWGRAAGTLEQLVIEEEF
CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHH
RDVDIPDMGITGWVTLTIAQAGTDDQRERWVEPVLRGEVMWCQLFSEPGAGSDAAAVRTA
CCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHH
AKRVDGGWRVTGQKVWTSLAHLCQWGLATVRTDPDAPKHAGVTMMAIDMSADGVTVNPLR
HHHCCCCEEEEHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEECCCCEEECCCC
GLTGDSHFNEVFFDDVFVPDADVVGDVNRGWLVARATLGNERISIGGGSGAPTGFSADDL
CCCCCCCCCHHHHCCEECCCCHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHHH
VALLDSAPADVAAAHVRRAGAVIAEAHTLRLLNLRRASRAIAGAEPGPEGNVTKLLVAEQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHH
CQRQTELGMDLAGTAAVVGGAPTLTRAYLGNRAMTIAGGTSEITRNTIAERILGLPRDPL
HHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCC
LR
CC
>Mature Secondary Structure
MRKSALAITDDHIALAESAQGRLDRSGSRAAARATLEGGAAHPADLWRAAADLGWHGLAV
CCCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHHHCCCCHHHH
AEQFGGAGFGLSELAVVLEMQGRDLTPGPFLPSVAASVVLDRCAGDDVRAELLPGLSSGA
HHHCCCCCCCHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC
TVAALGLTGTLTVGAAGSVAGKCPAVLGAPDADLLVLVADEDVVVLDAKDAGVTVTALDG
EEEEECCCEEEEECCCCCCCCCCCEEECCCCCCEEEEEECCCEEEEECCCCCEEEEEECC
IDTTRSIGTVAVRDVHVPAGRVLTGAARRAQTVFRILGAAEAAGVGWACLDMAVEYAKVR
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EQFGRTIGTFQAVKHHAANMLVDAEQTTAAVWDATRADDLDSAWFPAAVAASHAIRASVL
HHHCHHHHHHHHHHHHHHHHEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEE
LAQNNIQLHGGIAFTWEHDAHLYLRRARSLAALLADGTDPLVDIVEAQRSGRARGASFAL
EEECCEEEECCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEC
PAEADEYRAAARAAAAEWAALPPDRRRDFLVDSGYLVPHWPKPWGRAAGTLEQLVIEEEF
CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHH
RDVDIPDMGITGWVTLTIAQAGTDDQRERWVEPVLRGEVMWCQLFSEPGAGSDAAAVRTA
CCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHH
AKRVDGGWRVTGQKVWTSLAHLCQWGLATVRTDPDAPKHAGVTMMAIDMSADGVTVNPLR
HHHCCCCEEEEHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEECCCCEEECCCC
GLTGDSHFNEVFFDDVFVPDADVVGDVNRGWLVARATLGNERISIGGGSGAPTGFSADDL
CCCCCCCCCHHHHCCEECCCCHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHHH
VALLDSAPADVAAAHVRRAGAVIAEAHTLRLLNLRRASRAIAGAEPGPEGNVTKLLVAEQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHH
CQRQTELGMDLAGTAAVVGGAPTLTRAYLGNRAMTIAGGTSEITRNTIAERILGLPRDPL
HHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCC
LR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]