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The map label for this gene is pduA [H]

Identifier: 108797173

GI number: 108797173

Start: 213679

End: 213960

Strand: Reverse

Name: pduA [H]

Synonym: Mmcs_0193

Alternate gene names: 108797173

Gene position: 213960-213679 (Counterclockwise)

Preceding gene: 108797174

Following gene: 108797172

Centisome position: 3.75

GC content: 69.5

Gene sequence:

>282_bases
ATGCCCAGCAACGCAATCGGTCTCATCGAGACCAAGGGTTACGTGGCGGCGCTGGCCGCGGCCGACGCCATGGTGAAGGC
GGCCAACGTCACCATCACCGATCGCCAGCAGGTCGGCGACGGGCTCGTCGCCGTCATCGTCACCGGCGAGGTGGGTGCGG
TCAAGGCCGCCACCGAGGCCGGTGCGGAGGCGGCGTCGCAGGTCGGTGAACTCGTCAGCGTCCACGTCATCCCGCGGCCG
CACAGCGAGCTCGGCGCACACTTCGCCGTCAACGCCCAGTAA

Upstream 100 bases:

>100_bases
ACTGGTTCACCGGCACCCCGCCGCCCGTCGACGCACTGATCATCGGCTCCATCGACGACCCCAGCTCCACGAGTTAGCCA
AGAGATAGAGGAGAAGAACA

Downstream 100 bases:

>100_bases
TTCGCCTGCCGCACCCAGCACCCATCTCGAAGGAAGTGACGGCCATGCCCGCGACGGCATCGGGGACGCGCACCGACATC
CGCGTCTACCTGCTGGTGGA

Product: microcompartments protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MPSNAIGLIETKGYVAALAAADAMVKAANVTITDRQQVGDGLVAVIVTGEVGAVKAATEAGAEAASQVGELVSVHVIPRP
HSELGAHFAVNAQ

Sequences:

>Translated_93_residues
MPSNAIGLIETKGYVAALAAADAMVKAANVTITDRQQVGDGLVAVIVTGEVGAVKAATEAGAEAASQVGELVSVHVIPRP
HSELGAHFAVNAQ
>Mature_92_residues
PSNAIGLIETKGYVAALAAADAMVKAANVTITDRQQVGDGLVAVIVTGEVGAVKAATEAGAEAASQVGELVSVHVIPRPH
SELGAHFAVNAQ

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=90, Percent_Identity=54.4444444444444, Blast_Score=83, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9274; Mature: 9142

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSNAIGLIETKGYVAALAAADAMVKAANVTITDRQQVGDGLVAVIVTGEVGAVKAATEA
CCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCEEHHHHC
GAEAASQVGELVSVHVIPRPHSELGAHFAVNAQ
CHHHHHHHHHEEEEEECCCCCHHHCCEEEEECC
>Mature Secondary Structure 
PSNAIGLIETKGYVAALAAADAMVKAANVTITDRQQVGDGLVAVIVTGEVGAVKAATEA
CCCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCEEHHHHC
GAEAASQVGELVSVHVIPRPHSELGAHFAVNAQ
CHHHHHHHHHEEEEEECCCCCHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]