| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797172
Identifier: 108797172
GI number: 108797172
Start: 212981
End: 213634
Strand: Reverse
Name: 108797172
Synonym: Mmcs_0192
Alternate gene names: NA
Gene position: 213634-212981 (Counterclockwise)
Preceding gene: 108797173
Following gene: 108797171
Centisome position: 3.74
GC content: 68.65
Gene sequence:
>654_bases ATGCCCGCGACGGCATCGGGGACGCGCACCGACATCCGCGTCTACCTGCTGGTGGAGGATCTGCAACGGCAGTTCGCCGC CTACCTCGGCACGCCGACCCGCGCCAGGGGGTACCCGCCCTACGAGGGTGAGCACGCACTCATCGTCGAGGTGTCCCCGG CGCTGGCCATCGAGCGGGTGATCGACCTGGCACTGCGCGAGGTACCGGGTATCCAGCCCGGAATCCTCTACGTGGAGCGG CAGTTCGGTGTGCTGGAGATCCACTCGGCCAGCCTGTCCGACGTCCGCCGGGCCGGGGAGGCGATCCTCACCGGAACCGG TAACAAGGCCAGTGACCAGTTGCGGCCGCGGGTGCTCTACCACGACATCATCACCGACATCACCGATCAGCACGCGGTGA TCCTCAACCGCAACCGGCAGGCGTCGATGATCCTGCCGGGGCAGTCGCTGCTGGTGTACGAGATGACACCGGCGCTGTTC GCGGCCGTGGCGGCGAACGAGGCCGAACGCGCCGCGCCGGGGCTTACGGTGGTCGACGTGCAGATGATCGGTGCGGCCGG CCGCCTCTACATCGGTGGCTCGGTCGCGGATGTGACCACCGCGCGGGACCGCATCACCTCCGTGCTCGCCGCGATCGAAG GACGCGATCACTGA
Upstream 100 bases:
>100_bases TCATCCCGCGGCCGCACAGCGAGCTCGGCGCACACTTCGCCGTCAACGCCCAGTAATTCGCCTGCCGCACCCAGCACCCA TCTCGAAGGAAGTGACGGCC
Downstream 100 bases:
>100_bases TGGGGGAGGTCATCGCCGACGACGTCGAGGTCGCCGAGCGGGCGCTGGCCGACTACGACCTGCCGGCGAACTCGACCCTG CGTCTGCTGAACCTGTCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Bacterial Microcompartments Protein Family; Microcompartments Protein Family Protein
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MPATASGTRTDIRVYLLVEDLQRQFAAYLGTPTRARGYPPYEGEHALIVEVSPALAIERVIDLALREVPGIQPGILYVER QFGVLEIHSASLSDVRRAGEAILTGTGNKASDQLRPRVLYHDIITDITDQHAVILNRNRQASMILPGQSLLVYEMTPALF AAVAANEAERAAPGLTVVDVQMIGAAGRLYIGGSVADVTTARDRITSVLAAIEGRDH
Sequences:
>Translated_217_residues MPATASGTRTDIRVYLLVEDLQRQFAAYLGTPTRARGYPPYEGEHALIVEVSPALAIERVIDLALREVPGIQPGILYVER QFGVLEIHSASLSDVRRAGEAILTGTGNKASDQLRPRVLYHDIITDITDQHAVILNRNRQASMILPGQSLLVYEMTPALF AAVAANEAERAAPGLTVVDVQMIGAAGRLYIGGSVADVTTARDRITSVLAAIEGRDH >Mature_216_residues PATASGTRTDIRVYLLVEDLQRQFAAYLGTPTRARGYPPYEGEHALIVEVSPALAIERVIDLALREVPGIQPGILYVERQ FGVLEIHSASLSDVRRAGEAILTGTGNKASDQLRPRVLYHDIITDITDQHAVILNRNRQASMILPGQSLLVYEMTPALFA AVAANEAERAAPGLTVVDVQMIGAAGRLYIGGSVADVTTARDRITSVLAAIEGRDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23423; Mature: 23292
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATASGTRTDIRVYLLVEDLQRQFAAYLGTPTRARGYPPYEGEHALIVEVSPALAIERV CCCCCCCCCCEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECHHHHHHHH IDLALREVPGIQPGILYVERQFGVLEIHSASLSDVRRAGEAILTGTGNKASDQLRPRVLY HHHHHHHCCCCCCCEEEEEECCCEEEEECCCHHHHHHCCCEEEECCCCCCCHHHCHHHHH HDIITDITDQHAVILNRNRQASMILPGQSLLVYEMTPALFAAVAANEAERAAPGLTVVDV HHHHHCCCCCEEEEEECCCCCEEEECCCCEEEEEECHHHHHHHHHCCHHHHCCCCEEEEE QMIGAAGRLYIGGSVADVTTARDRITSVLAAIEGRDH EEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PATASGTRTDIRVYLLVEDLQRQFAAYLGTPTRARGYPPYEGEHALIVEVSPALAIERV CCCCCCCCCEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECHHHHHHHH IDLALREVPGIQPGILYVERQFGVLEIHSASLSDVRRAGEAILTGTGNKASDQLRPRVLY HHHHHHHCCCCCCCEEEEEECCCEEEEECCCHHHHHHCCCEEEECCCCCCCHHHCHHHHH HDIITDITDQHAVILNRNRQASMILPGQSLLVYEMTPALFAAVAANEAERAAPGLTVVDV HHHHHCCCCCEEEEEECCCCCEEEECCCCEEEEEECHHHHHHHHHCCHHHHCCCCEEEEE QMIGAAGRLYIGGSVADVTTARDRITSVLAAIEGRDH EEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA