| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797155
Identifier: 108797155
GI number: 108797155
Start: 192712
End: 194205
Strand: Direct
Name: 108797155
Synonym: Mmcs_0175
Alternate gene names: NA
Gene position: 192712-194205 (Clockwise)
Preceding gene: 108797154
Following gene: 108797156
Centisome position: 3.38
GC content: 73.16
Gene sequence:
>1494_bases ATGAGCGCCGCCTCCGATCCTGTCGCCGCGGCCGACGCGGTGGTTGCCGCCGTCGACCCCGCGCTGGACTCGCCGGGGGT GCAGTCCAGCGACAGCGTGCTGGTCACCGGTCCGTGGCTGGCCGGGGTCAGCAGCCTGATCGCGGTCCTGCGGGACCGGC TACCGGAGGTGTCGTTCGTCGAGGCCGACGAGCTGCCCGCGGGCAGCGCACCCGTCGCCGTGGTGTTCGCGGTCTCGGCG GTCTCCGCGCTGGCCGGCTCCGACTGCGAACTGCTCGATCTGGCGGCCGACCACACCGACTGCGTCATCGGCGTCGTCAC CAAGATCGACGTGCACCTCGACTGGCGTGAGGTCATGGCCGCCGACCGCGAACTGCTCGGCGCGCACCGCCGGCGCTACG CCGCGCTGCCGTGGGTCGGGGTGGCCGCGGCGCCTGACGACGGGGACCCGATGGTCGACGACCTGGTCGACCTGCTGCGT GACACCCTCGGCGATCCCGAGGTGCTGCGACGAAACCGGTTGCGGGCGTGGGAAAGTCAGCTCGAGAAGGTGGTCGCGCG CTATCGCGCCGACGGTGAGGGCGCCGACCGGCACGCCCGGGTGTCCGCCCTGCGCGCGCAGCGCGACGAGATCCGCCGCG CCAGACGGGTGGAGAAGTCGCAACGCGCGATCGCCCTGCGGAGCCAGATACAGCAGGCGCGCGTGCAGTTGACGTACTTC GCGCGCAACCGGTGCGCGTCGGTGCGCGGCGAACTGCAGGAGGACATCGCCGAACTGGGCCGCCGCAGGCTCGACGCCTT CGAACAGACGGTGCGCGGCCGCGCCGCCGAGGTGATGACCGAGGTCGACGAGGGCGTCACCACCCACCTGACCGCCGTCG CGGCCGACCTGCACCTGGACGACGTGCCGCCACCTCCGCAGCCGATTCCCGTCCCCGACCTCCCCGGGCCGTCGTTGCGG TCGCGTCGGCTCGAGACGCGGCTGATGATGTTGCTCGGCGCCGGCTTCGGACTCGGTGTCGCCCTCGCGGTGAGCCGGCT GTTCAGCGGGGTCGATCCGGGCCTGACGGTCGCCGGTGTGCTCGCCGGCGCGGCGGCCGGGCTGGCGGTGGCGGTGTGGG TGGTCGGCATCCGCGGGTTGCTGCACGATCGCGGTGTCCTGGACCGCTGGGTCGCCGACGTCACCGCGACGCTGCGCTCG GCGGCCGAAGAGGCCGTCGCCACCCGCGTGCTGGCCGCCGAGGCGGCGCTGACCGCCGCGCTGGCCGCCGAGGAGGAGGC AGACGCGGACGCCGCGGCCGTCCGGATCGCCGAGATCGACGCCGAACTGCGGGAGCACGCGGCCGCCACGGCGCGTGCCG CGGCGCTGCGCGACCGTCGGTTACCCGGCTTGCAGCGCGCGCTGGAGGCGGTGTGCGCCGAGTTGTACGACAAAAAAGCA GACGAATTCACCGAGGCGAACGAACGCAATTCCGGAAAAAACGTCGGCTACTGA
Upstream 100 bases:
>100_bases TGTGGTGGCGCGGCTACAGCCGCGGCCCGGTGAGCCCGCTGCATCGGGCGTGCGGCGCTGACATCGCCCGCGGTTCGCTG CGGCTGTTCGAGCGTCGCCG
Downstream 100 bases:
>100_bases TCGGTAGGTGCGTTATTTGCTTTTCTGAATCGTTCCTGTGAGTCATCGGACATAGATCCGAATTCCTTCGGGTATGTCAC CCACGTTAACCTCGGGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MSAASDPVAAADAVVAAVDPALDSPGVQSSDSVLVTGPWLAGVSSLIAVLRDRLPEVSFVEADELPAGSAPVAVVFAVSA VSALAGSDCELLDLAADHTDCVIGVVTKIDVHLDWREVMAADRELLGAHRRRYAALPWVGVAAAPDDGDPMVDDLVDLLR DTLGDPEVLRRNRLRAWESQLEKVVARYRADGEGADRHARVSALRAQRDEIRRARRVEKSQRAIALRSQIQQARVQLTYF ARNRCASVRGELQEDIAELGRRRLDAFEQTVRGRAAEVMTEVDEGVTTHLTAVAADLHLDDVPPPPQPIPVPDLPGPSLR SRRLETRLMMLLGAGFGLGVALAVSRLFSGVDPGLTVAGVLAGAAAGLAVAVWVVGIRGLLHDRGVLDRWVADVTATLRS AAEEAVATRVLAAEAALTAALAAEEEADADAAAVRIAEIDAELREHAAATARAAALRDRRLPGLQRALEAVCAELYDKKA DEFTEANERNSGKNVGY
Sequences:
>Translated_497_residues MSAASDPVAAADAVVAAVDPALDSPGVQSSDSVLVTGPWLAGVSSLIAVLRDRLPEVSFVEADELPAGSAPVAVVFAVSA VSALAGSDCELLDLAADHTDCVIGVVTKIDVHLDWREVMAADRELLGAHRRRYAALPWVGVAAAPDDGDPMVDDLVDLLR DTLGDPEVLRRNRLRAWESQLEKVVARYRADGEGADRHARVSALRAQRDEIRRARRVEKSQRAIALRSQIQQARVQLTYF ARNRCASVRGELQEDIAELGRRRLDAFEQTVRGRAAEVMTEVDEGVTTHLTAVAADLHLDDVPPPPQPIPVPDLPGPSLR SRRLETRLMMLLGAGFGLGVALAVSRLFSGVDPGLTVAGVLAGAAAGLAVAVWVVGIRGLLHDRGVLDRWVADVTATLRS AAEEAVATRVLAAEAALTAALAAEEEADADAAAVRIAEIDAELREHAAATARAAALRDRRLPGLQRALEAVCAELYDKKA DEFTEANERNSGKNVGY >Mature_496_residues SAASDPVAAADAVVAAVDPALDSPGVQSSDSVLVTGPWLAGVSSLIAVLRDRLPEVSFVEADELPAGSAPVAVVFAVSAV SALAGSDCELLDLAADHTDCVIGVVTKIDVHLDWREVMAADRELLGAHRRRYAALPWVGVAAAPDDGDPMVDDLVDLLRD TLGDPEVLRRNRLRAWESQLEKVVARYRADGEGADRHARVSALRAQRDEIRRARRVEKSQRAIALRSQIQQARVQLTYFA RNRCASVRGELQEDIAELGRRRLDAFEQTVRGRAAEVMTEVDEGVTTHLTAVAADLHLDDVPPPPQPIPVPDLPGPSLRS RRLETRLMMLLGAGFGLGVALAVSRLFSGVDPGLTVAGVLAGAAAGLAVAVWVVGIRGLLHDRGVLDRWVADVTATLRSA AEEAVATRVLAAEAALTAALAAEEEADADAAAVRIAEIDAELREHAAATARAAALRDRRLPGLQRALEAVCAELYDKKAD EFTEANERNSGKNVGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52889; Mature: 52758
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAASDPVAAADAVVAAVDPALDSPGVQSSDSVLVTGPWLAGVSSLIAVLRDRLPEVSFV CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEE EADELPAGSAPVAVVFAVSAVSALAGSDCELLDLAADHTDCVIGVVTKIDVHLDWREVMA ECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHEEHHHHEEEEECHHHHHH ADRELLGAHRRRYAALPWVGVAAAPDDGDPMVDDLVDLLRDTLGDPEVLRRNRLRAWESQ HHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LEKVVARYRADGEGADRHARVSALRAQRDEIRRARRVEKSQRAIALRSQIQQARVQLTYF HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARNRCASVRGELQEDIAELGRRRLDAFEQTVRGRAAEVMTEVDEGVTTHLTAVAADLHLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC DVPPPPQPIPVPDLPGPSLRSRRLETRLMMLLGAGFGLGVALAVSRLFSGVDPGLTVAGV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH LAGAAAGLAVAVWVVGIRGLLHDRGVLDRWVADVTATLRSAAEEAVATRVLAAEAALTAA HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAEEEADADAAAVRIAEIDAELREHAAATARAAALRDRRLPGLQRALEAVCAELYDKKA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH DEFTEANERNSGKNVGY HHHHHHHCCCCCCCCCC >Mature Secondary Structure SAASDPVAAADAVVAAVDPALDSPGVQSSDSVLVTGPWLAGVSSLIAVLRDRLPEVSFV CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEE EADELPAGSAPVAVVFAVSAVSALAGSDCELLDLAADHTDCVIGVVTKIDVHLDWREVMA ECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHEEHHHHEEEEECHHHHHH ADRELLGAHRRRYAALPWVGVAAAPDDGDPMVDDLVDLLRDTLGDPEVLRRNRLRAWESQ HHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LEKVVARYRADGEGADRHARVSALRAQRDEIRRARRVEKSQRAIALRSQIQQARVQLTYF HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARNRCASVRGELQEDIAELGRRRLDAFEQTVRGRAAEVMTEVDEGVTTHLTAVAADLHLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC DVPPPPQPIPVPDLPGPSLRSRRLETRLMMLLGAGFGLGVALAVSRLFSGVDPGLTVAGV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH LAGAAAGLAVAVWVVGIRGLLHDRGVLDRWVADVTATLRSAAEEAVATRVLAAEAALTAA HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAEEEADADAAAVRIAEIDAELREHAAATARAAALRDRRLPGLQRALEAVCAELYDKKA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH DEFTEANERNSGKNVGY HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA