| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797131
Identifier: 108797131
GI number: 108797131
Start: 166487
End: 167473
Strand: Direct
Name: 108797131
Synonym: Mmcs_0151
Alternate gene names: NA
Gene position: 166487-167473 (Clockwise)
Preceding gene: 108797130
Following gene: 108797132
Centisome position: 2.92
GC content: 67.98
Gene sequence:
>987_bases ATGCCGCAGCAGACCATGCGGAAGCTGACCACCGCGATCTTCGCGGCCGGATTGTTCGGAGGCCTGGTGCTGAGCGCCGC GCCGGCGCTGGCCCAACCGGCGCCGCCGCCACCGCCGCCGGCACCGGTCGATCCGTTCGCCCCGCCGCCACCGCCGGCGA ACCCGTTCGCGTTCCCGGCGCCTGCCGCAGCGGACCCGTTCGCGCCCACCGCGCAGCCGCTGCCGATTCCCGAGGGCACC CCGGCCGGCCAGAACCCGACCCCCTACGTCGGCAAGCCGGTGTTCGCACCGCCGACGTTCAACCCGGTCAACGGGTCGAT CGCCGGCGCGGCCAAACCGATCTACATCGACTTCCAGCGTCCGATCGCCAACCGGGCCCTGGCCGAGCAGGCCATCCACA TCTCGTCGAATCCGCCGGTGCCGGGCCGCTTCTACTGGACCAGTGACACCCAGGTGCGCTGGCGCCCGCAGGACTTCTGG CCGGCGGGCACGGTGGTGAACATCGACGCGTCGGGGACCAAGTCGAGCTTCACCGTCCCCGAGCAGCTGGTCGCCACCAT CGACAACAAGTCGCTGCAGATGGAGATCCACCGCAACGGCGAGCTGGTCAAGACCTTCCCCGTCTCGATGGGCAAGAAGG GCTACGACACCAAGAACGGCACCTACTACGTGCTGGAGAAATTCGCCGACATCGTGATGGACTCCTCCACCTACGGCGTG CCGGTCGACGACCCGTCCGGTGAGGGCTACAAGCTCAAGGTCCAGGACGCCGTGCGCATCGACAACAGCGGGGTCTTCGT ACACAGCGCGCCGTGGTCGGTGGGCTCCCAGGGCGAGAGCAACGTCAGCCACGGCTGCATCAACCTCAGCCCGGCCAACG CGCAGTGGTTCTTCGACAACTTCGGCAGCGGTGACGCCGTCGTGATCAAGAACTCGACCGGCATCTACAACCAGCCCGAC GGTGCGTCGGATTGGCAGATGTTCTGA
Upstream 100 bases:
>100_bases CCCGCGACGGTTTCGGAACGGTGACGGCGAACGCCGAGCTGGGGTTGCCGGCCGGCGTCCTGTGCGACACTGGACCTTGA TCTGTGACTGGAGGTATCGG
Downstream 100 bases:
>100_bases CCTGACTCCCGTTCGGCGCCGCCCGCCCGGCAGCCCGTGTCAGGATGAGGTCGGCCGGCCGTCGCACCGGCGGCCGGTGA CCTGCCGAGGGTTAGCCGAT
Product: ErfK/YbiS/YcfS/YnhG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MPQQTMRKLTTAIFAAGLFGGLVLSAAPALAQPAPPPPPPAPVDPFAPPPPPANPFAFPAPAAADPFAPTAQPLPIPEGT PAGQNPTPYVGKPVFAPPTFNPVNGSIAGAAKPIYIDFQRPIANRALAEQAIHISSNPPVPGRFYWTSDTQVRWRPQDFW PAGTVVNIDASGTKSSFTVPEQLVATIDNKSLQMEIHRNGELVKTFPVSMGKKGYDTKNGTYYVLEKFADIVMDSSTYGV PVDDPSGEGYKLKVQDAVRIDNSGVFVHSAPWSVGSQGESNVSHGCINLSPANAQWFFDNFGSGDAVVIKNSTGIYNQPD GASDWQMF
Sequences:
>Translated_328_residues MPQQTMRKLTTAIFAAGLFGGLVLSAAPALAQPAPPPPPPAPVDPFAPPPPPANPFAFPAPAAADPFAPTAQPLPIPEGT PAGQNPTPYVGKPVFAPPTFNPVNGSIAGAAKPIYIDFQRPIANRALAEQAIHISSNPPVPGRFYWTSDTQVRWRPQDFW PAGTVVNIDASGTKSSFTVPEQLVATIDNKSLQMEIHRNGELVKTFPVSMGKKGYDTKNGTYYVLEKFADIVMDSSTYGV PVDDPSGEGYKLKVQDAVRIDNSGVFVHSAPWSVGSQGESNVSHGCINLSPANAQWFFDNFGSGDAVVIKNSTGIYNQPD GASDWQMF >Mature_327_residues PQQTMRKLTTAIFAAGLFGGLVLSAAPALAQPAPPPPPPAPVDPFAPPPPPANPFAFPAPAAADPFAPTAQPLPIPEGTP AGQNPTPYVGKPVFAPPTFNPVNGSIAGAAKPIYIDFQRPIANRALAEQAIHISSNPPVPGRFYWTSDTQVRWRPQDFWP AGTVVNIDASGTKSSFTVPEQLVATIDNKSLQMEIHRNGELVKTFPVSMGKKGYDTKNGTYYVLEKFADIVMDSSTYGVP VDDPSGEGYKLKVQDAVRIDNSGVFVHSAPWSVGSQGESNVSHGCINLSPANAQWFFDNFGSGDAVVIKNSTGIYNQPDG ASDWQMF
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the YkuD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005490 [H]
Pfam domain/function: PF03734 YkuD [H]
EC number: NA
Molecular weight: Translated: 34915; Mature: 34784
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQQTMRKLTTAIFAAGLFGGLVLSAAPALAQPAPPPPPPAPVDPFAPPPPPANPFAFPA CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAAADPFAPTAQPLPIPEGTPAGQNPTPYVGKPVFAPPTFNPVNGSIAGAAKPIYIDFQR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECC PIANRALAEQAIHISSNPPVPGRFYWTSDTQVRWRPQDFWPAGTVVNIDASGTKSSFTVP CHHHHHHHHHEEEECCCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCH EQLVATIDNKSLQMEIHRNGELVKTFPVSMGKKGYDTKNGTYYVLEKFADIVMDSSTYGV HHHHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCC PVDDPSGEGYKLKVQDAVRIDNSGVFVHSAPWSVGSQGESNVSHGCINLSPANAQWFFDN CCCCCCCCCEEEEEEHEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEC FGSGDAVVIKNSTGIYNQPDGASDWQMF CCCCCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure PQQTMRKLTTAIFAAGLFGGLVLSAAPALAQPAPPPPPPAPVDPFAPPPPPANPFAFPA CHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAAADPFAPTAQPLPIPEGTPAGQNPTPYVGKPVFAPPTFNPVNGSIAGAAKPIYIDFQR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEECC PIANRALAEQAIHISSNPPVPGRFYWTSDTQVRWRPQDFWPAGTVVNIDASGTKSSFTVP CHHHHHHHHHEEEECCCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCH EQLVATIDNKSLQMEIHRNGELVKTFPVSMGKKGYDTKNGTYYVLEKFADIVMDSSTYGV HHHHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCC PVDDPSGEGYKLKVQDAVRIDNSGVFVHSAPWSVGSQGESNVSHGCINLSPANAQWFFDN CCCCCCCCCEEEEEEHEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEC FGSGDAVVIKNSTGIYNQPDGASDWQMF CCCCCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]