| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797099
Identifier: 108797099
GI number: 108797099
Start: 133702
End: 134733
Strand: Direct
Name: 108797099
Synonym: Mmcs_0119
Alternate gene names: NA
Gene position: 133702-134733 (Clockwise)
Preceding gene: 108797098
Following gene: 108797100
Centisome position: 2.34
GC content: 65.41
Gene sequence:
>1032_bases ATGAAAATCACCGGTACCGCACTCAAACTCGGCGCCTTCTCGCTGGTGCTGCTGCTGTTCACCGCGATCATCATCGTGGT GTTCGGTCAGATGCGTTTCGATCGCACCACCGGCTACTCGGCGATCTTCACCAATGTCAGCGGCCTGCGGCCCGGCCAGT TCGTCCGCGCCTCCGGCGTCGAGGTCGGCAAGGTCTCCAAGATCGAGCTGATCGAAGGGGGCAGCCGGGTCAAGGTCGAC TTCAAGGTCGACCGGTCCCTGCCCCTGTTCGACGAGTCCACCGCGTCGGTGCGCTACCTGAACCTGATCGGCGACCGCTA CCTCGAACTCAAGCGCGGCGACAGCGATCGGAAGATGCCCTCCGGCGGCACCATCCCGGTCGAGCGCACCGAACCCGCGC TGGACCTCGACGCGCTCATCGGCGGTTTCCGCCCGCTGTTCCGGGCGCTCGACCCGGAGAAGGTCAACAACATCGCCAGG TCGATCATCACGGTATTCCAGGGGCAGGGCGGCACCATCAACGACATCCTCGACCAGACCGCGTCGCTGACGTCGGCGCT GGCCGATCGAGACCAGGCGATCGGTGAGGTGATCCGCAACCTCAACACCGTGCTCGACACCACCGTCAGGCACCAGGAGC AGTTCGACGAAACGCTGGTGAACTTCGAGCGGCTCATCACCGGTTTGAAGAACCGCGCCGACCCGATCGCGTCGTCGGTC GCCGACATCAGCGACGCCGCGGGCACCGTGGCCGACCTGCTCGCCGAGAACCGGTCGCTGCTGCAGGACACGGTCGGCTA CCTGGAGGCCACCCAGCAGCCGCTGGTCGAGCAGAAGGGTCAGCTCAATGACATCCTCGTCCGGTTGCCGAACGCGTTGA AGATCATCGGCCGCGCCGGCGGCGTGTACGGCGACTTCTTCAACTTCTACGCCTGCGACGTGACGCTCAAGCTCAATGGC CTGCAGCCGGGCGGGCCGGTGCGCACCGTCAAGGTGTGGGGTCAGCCCACGGGTAGGTGCACTCCGCAATGA
Upstream 100 bases:
>100_bases CAGGCGCCTCCCTTGCGCCGTACAACCATCTCGAACTCGGTCAACCGATCGCCATCGAATACGTCTGGGGACGCCAGATC GGGGAGAACACGATCAACCC
Downstream 100 bases:
>100_bases GAACGCTCGAGGGATCGAACCGCCTCCGCGGCGGGTTGATGGGCATCATCATCCTGGTGCTCGTCGTCGGGGTCGGACAG AGCTTCGCCAGCGTGCCTAT
Product: virulence factor MCE-like protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; MCE-Family B; Mammalian Cell Entry Related Domain Protein; MCE-Family Protein; MCE-Family C; Mce-Related Protein; Mce Family C; Mce Family D; Mce Related Protein; Mce Family B; Mce Family Protein Mce5B; Mammalian Cell Entry-Like Domain-Containing Protein; Mce Family Lipob; Virulence Factor MCE-Like Protein; MCE-Family; ABC-Type Transport System; Mce-Family C
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKITGTALKLGAFSLVLLLFTAIIIVVFGQMRFDRTTGYSAIFTNVSGLRPGQFVRASGVEVGKVSKIELIEGGSRVKVD FKVDRSLPLFDESTASVRYLNLIGDRYLELKRGDSDRKMPSGGTIPVERTEPALDLDALIGGFRPLFRALDPEKVNNIAR SIITVFQGQGGTINDILDQTASLTSALADRDQAIGEVIRNLNTVLDTTVRHQEQFDETLVNFERLITGLKNRADPIASSV ADISDAAGTVADLLAENRSLLQDTVGYLEATQQPLVEQKGQLNDILVRLPNALKIIGRAGGVYGDFFNFYACDVTLKLNG LQPGGPVRTVKVWGQPTGRCTPQ
Sequences:
>Translated_343_residues MKITGTALKLGAFSLVLLLFTAIIIVVFGQMRFDRTTGYSAIFTNVSGLRPGQFVRASGVEVGKVSKIELIEGGSRVKVD FKVDRSLPLFDESTASVRYLNLIGDRYLELKRGDSDRKMPSGGTIPVERTEPALDLDALIGGFRPLFRALDPEKVNNIAR SIITVFQGQGGTINDILDQTASLTSALADRDQAIGEVIRNLNTVLDTTVRHQEQFDETLVNFERLITGLKNRADPIASSV ADISDAAGTVADLLAENRSLLQDTVGYLEATQQPLVEQKGQLNDILVRLPNALKIIGRAGGVYGDFFNFYACDVTLKLNG LQPGGPVRTVKVWGQPTGRCTPQ >Mature_343_residues MKITGTALKLGAFSLVLLLFTAIIIVVFGQMRFDRTTGYSAIFTNVSGLRPGQFVRASGVEVGKVSKIELIEGGSRVKVD FKVDRSLPLFDESTASVRYLNLIGDRYLELKRGDSDRKMPSGGTIPVERTEPALDLDALIGGFRPLFRALDPEKVNNIAR SIITVFQGQGGTINDILDQTASLTSALADRDQAIGEVIRNLNTVLDTTVRHQEQFDETLVNFERLITGLKNRADPIASSV ADISDAAGTVADLLAENRSLLQDTVGYLEATQQPLVEQKGQLNDILVRLPNALKIIGRAGGVYGDFFNFYACDVTLKLNG LQPGGPVRTVKVWGQPTGRCTPQ
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37283; Mature: 37283
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITGTALKLGAFSLVLLLFTAIIIVVFGQMRFDRTTGYSAIFTNVSGLRPGQFVRASGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHECCCCCCCCCCEEEECCC EVGKVSKIELIEGGSRVKVDFKVDRSLPLFDESTASVRYLNLIGDRYLELKRGDSDRKMP CCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SGGTIPVERTEPALDLDALIGGFRPLFRALDPEKVNNIARSIITVFQGQGGTINDILDQT CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ASLTSALADRDQAIGEVIRNLNTVLDTTVRHQEQFDETLVNFERLITGLKNRADPIASSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ADISDAAGTVADLLAENRSLLQDTVGYLEATQQPLVEQKGQLNDILVRLPNALKIIGRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCC GVYGDFFNFYACDVTLKLNGLQPGGPVRTVKVWGQPTGRCTPQ CCHHHHHHEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MKITGTALKLGAFSLVLLLFTAIIIVVFGQMRFDRTTGYSAIFTNVSGLRPGQFVRASGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHECCCCCCCCCCEEEECCC EVGKVSKIELIEGGSRVKVDFKVDRSLPLFDESTASVRYLNLIGDRYLELKRGDSDRKMP CCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SGGTIPVERTEPALDLDALIGGFRPLFRALDPEKVNNIARSIITVFQGQGGTINDILDQT CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ASLTSALADRDQAIGEVIRNLNTVLDTTVRHQEQFDETLVNFERLITGLKNRADPIASSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH ADISDAAGTVADLLAENRSLLQDTVGYLEATQQPLVEQKGQLNDILVRLPNALKIIGRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCC GVYGDFFNFYACDVTLKLNGLQPGGPVRTVKVWGQPTGRCTPQ CCHHHHHHEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA