| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797098
Identifier: 108797098
GI number: 108797098
Start: 132485
End: 133705
Strand: Direct
Name: 108797098
Synonym: Mmcs_0118
Alternate gene names: NA
Gene position: 132485-133705 (Clockwise)
Preceding gene: 108797097
Following gene: 108797099
Centisome position: 2.32
GC content: 67.08
Gene sequence:
>1221_bases ATGGCCGAGCCGCGTTCCCCCGTCAACAAGCCCCGCACGCCGCCCTACAAGCTGGCCGGCCTGATCCTGCTGGTGGTCTT CGCCGTCATCGCCACGCTGGTCGCGTTCCAGTTCCGCGGTGACTTCACCCCGCGTGAGAAGCTGACCATGATGGCGGCCC GCGCCGGTCTGAACCTCGACCCCGGCACCAAGGTGACCTTCAACGGTGTGGAGATCGGCCGCGTCGCCGAGGTCAACGCG GTCAGCGTCGGCAACGATCCCCGGGCCAGGATCACGCTCGAGGTCGACACGAAGTACATGCAGCTGATCCCGGCGAACGT GCTTGCGGACATCTCGGCGACCACGGTGTTCGGCAACAAGTACGTCTCGTTCACCACGCCGCCCGACCCGGTCCCGCAGC GGATCAAGTCCACCGACGTCATCGACGTGACCAGCGTGACGACGGAGTTCAACACGCTGTTCGAGACCGTCGTGTCGGTG GCGGAGAAGGTGGACCCGGTCAAGCTGAACCAGACCCTGACCGCGACCGCACAGGCCCTGGACGGCCTCGGCGACCGCTT CGGCGAGTCGATCGTCAACGGCAACGCGATCCTGGCCGACCTCAACCCGCAGATGCCGCAGATCCGACGGGACGTCCGCG GGCTGGCCGACCTCGGCGAGGTGTACGCCAACGCCGCCCCCGATCTGTTCGACGGGCTGGAGAATGCGGTGACCACGGCC CGCACGCTCAACGAACAGCGCGGCAACCTCGATCAGGCGCTCATCGCGGCGGTCGGCTTCGGCAACACCGGCGGTGAGGT GTTCGAACGTGGTGGTCCCTACCTGGTCCGCGGTGCGGAGGACCTCATCCCGACGAGTGCGCTGCTCGACGAGTACAGCC CCGCGCTGTTCTGCACGATCCGCAACTTCCACGACGTGGAGCCGAAGATCTCGTCGTCGCTGGGCGGGAACGGCTATTCG CTCAACACCCACTCCGAGGCCCTCGGCGCGGGCAACCCGTACGTGTACCCGGACAACCTGCCGCGCGTGAACGCCAAGGG TGGTCCGGAGGGGCGGCCCGGCTGCTGGCAGCCCATCACCCGGGATCTGTGGCCCGCGCCGTACCTGGTCCTCGACACAG GCGCCTCCCTTGCGCCGTACAACCATCTCGAACTCGGTCAACCGATCGCCATCGAATACGTCTGGGGACGCCAGATCGGG GAGAACACGATCAACCCATGA
Upstream 100 bases:
>100_bases GCTCGATGCGGGCCTCCCTCATCGCGATCGTGCTGGTGGTCCTGTTGGCTTCGTTGGCGCTCTACGGCACCGACCCGAAC TTCAACCTCACGGTGTAGCC
Downstream 100 bases:
>100_bases AAATCACCGGTACCGCACTCAAACTCGGCGCCTTCTCGCTGGTGCTGCTGCTGTTCACCGCGATCATCATCGTGGTGTTC GGTCAGATGCGTTTCGATCG
Product: virulence factor MCE-like protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; MCE-Family Protein; Mce Family A; Mammalian Cell Entry Related Domain-Containing Protein; MCE Family Protein; Cell Invasion Protein; Virulence Factor MCE-Like Protein; Mce-Related Protein; MCE-Family
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MAEPRSPVNKPRTPPYKLAGLILLVVFAVIATLVAFQFRGDFTPREKLTMMAARAGLNLDPGTKVTFNGVEIGRVAEVNA VSVGNDPRARITLEVDTKYMQLIPANVLADISATTVFGNKYVSFTTPPDPVPQRIKSTDVIDVTSVTTEFNTLFETVVSV AEKVDPVKLNQTLTATAQALDGLGDRFGESIVNGNAILADLNPQMPQIRRDVRGLADLGEVYANAAPDLFDGLENAVTTA RTLNEQRGNLDQALIAAVGFGNTGGEVFERGGPYLVRGAEDLIPTSALLDEYSPALFCTIRNFHDVEPKISSSLGGNGYS LNTHSEALGAGNPYVYPDNLPRVNAKGGPEGRPGCWQPITRDLWPAPYLVLDTGASLAPYNHLELGQPIAIEYVWGRQIG ENTINP
Sequences:
>Translated_406_residues MAEPRSPVNKPRTPPYKLAGLILLVVFAVIATLVAFQFRGDFTPREKLTMMAARAGLNLDPGTKVTFNGVEIGRVAEVNA VSVGNDPRARITLEVDTKYMQLIPANVLADISATTVFGNKYVSFTTPPDPVPQRIKSTDVIDVTSVTTEFNTLFETVVSV AEKVDPVKLNQTLTATAQALDGLGDRFGESIVNGNAILADLNPQMPQIRRDVRGLADLGEVYANAAPDLFDGLENAVTTA RTLNEQRGNLDQALIAAVGFGNTGGEVFERGGPYLVRGAEDLIPTSALLDEYSPALFCTIRNFHDVEPKISSSLGGNGYS LNTHSEALGAGNPYVYPDNLPRVNAKGGPEGRPGCWQPITRDLWPAPYLVLDTGASLAPYNHLELGQPIAIEYVWGRQIG ENTINP >Mature_405_residues AEPRSPVNKPRTPPYKLAGLILLVVFAVIATLVAFQFRGDFTPREKLTMMAARAGLNLDPGTKVTFNGVEIGRVAEVNAV SVGNDPRARITLEVDTKYMQLIPANVLADISATTVFGNKYVSFTTPPDPVPQRIKSTDVIDVTSVTTEFNTLFETVVSVA EKVDPVKLNQTLTATAQALDGLGDRFGESIVNGNAILADLNPQMPQIRRDVRGLADLGEVYANAAPDLFDGLENAVTTAR TLNEQRGNLDQALIAAVGFGNTGGEVFERGGPYLVRGAEDLIPTSALLDEYSPALFCTIRNFHDVEPKISSSLGGNGYSL NTHSEALGAGNPYVYPDNLPRVNAKGGPEGRPGCWQPITRDLWPAPYLVLDTGASLAPYNHLELGQPIAIEYVWGRQIGE NTINP
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43674; Mature: 43543
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPRSPVNKPRTPPYKLAGLILLVVFAVIATLVAFQFRGDFTPREKLTMMAARAGLNLD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC PGTKVTFNGVEIGRVAEVNAVSVGNDPRARITLEVDTKYMQLIPANVLADISATTVFGNK CCCEEEECCEEECCEEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHCHHEEEECCE YVSFTTPPDPVPQRIKSTDVIDVTSVTTEFNTLFETVVSVAEKVDPVKLNQTLTATAQAL EEEECCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHH DGLGDRFGESIVNGNAILADLNPQMPQIRRDVRGLADLGEVYANAAPDLFDGLENAVTTA HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RTLNEQRGNLDQALIAAVGFGNTGGEVFERGGPYLVRGAEDLIPTSALLDEYSPALFCTI HHHHHHHCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECHHHHCCHHHHHHHCCCEEEEEE RNFHDVEPKISSSLGGNGYSLNTHSEALGAGNPYVYPDNLPRVNAKGGPEGRPGCWQPIT CCCCCCCCHHHHCCCCCCEEECCCHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHH RDLWPAPYLVLDTGASLAPYNHLELGQPIAIEYVWGRQIGENTINP HHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCC >Mature Secondary Structure AEPRSPVNKPRTPPYKLAGLILLVVFAVIATLVAFQFRGDFTPREKLTMMAARAGLNLD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC PGTKVTFNGVEIGRVAEVNAVSVGNDPRARITLEVDTKYMQLIPANVLADISATTVFGNK CCCEEEECCEEECCEEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHCHHEEEECCE YVSFTTPPDPVPQRIKSTDVIDVTSVTTEFNTLFETVVSVAEKVDPVKLNQTLTATAQAL EEEECCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHH DGLGDRFGESIVNGNAILADLNPQMPQIRRDVRGLADLGEVYANAAPDLFDGLENAVTTA HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RTLNEQRGNLDQALIAAVGFGNTGGEVFERGGPYLVRGAEDLIPTSALLDEYSPALFCTI HHHHHHHCCHHHHHHHHHCCCCCCHHHHHCCCCEEEECHHHHCCHHHHHHHCCCEEEEEE RNFHDVEPKISSSLGGNGYSLNTHSEALGAGNPYVYPDNLPRVNAKGGPEGRPGCWQPIT CCCCCCCCHHHHCCCCCCEEECCCHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHH RDLWPAPYLVLDTGASLAPYNHLELGQPIAIEYVWGRQIGENTINP HHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA