| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797024
Identifier: 108797024
GI number: 108797024
Start: 54814
End: 55221
Strand: Direct
Name: 108797024
Synonym: Mmcs_0043
Alternate gene names: NA
Gene position: 54814-55221 (Clockwise)
Preceding gene: 108797023
Following gene: 108797025
Centisome position: 0.96
GC content: 70.1
Gene sequence:
>408_bases ATGACCGACCGCGACGACATCGCCGATGTCCTGATCCGCTACGCCACCGGCATCGACCGCCGCGACTGGCCGCTGTTCCG GACCGTGTTCACCGACGACTGCACCCTCGACTACGGCGACATCGGCACCTTCGACGGCGTCGACGCGGTCACCGAGTTCA TGGACCAGGCGCACGCGATGGCCGGTCACACCCTGCACCGGCTGACGAACTTCGCCATCGACGTCGGCGGGGACAGCGCC CGCGCCCGCGCGTACGTCGACGCGCTGATCTTCGCCCCGGACAACGCTTCCGGCGTGAACGCCGTCGGCTTCTACGACGA CGAACTGGTCCGCACCCCGGCCGGGTGGCGCATCGCGCGGCGCCGGTTCACCACCGTCCGGGTCAGCCCCGTCGGAGGAC AGTCGTGA
Upstream 100 bases:
>100_bases TCGCACCGGAGGACATCCGGGTCGGGATGCGGGTACGCCCGGTGTTCTTCGACTACCCCGACCACGACGTCACGATGCTG CGCTACGAACCGGACGTCGC
Downstream 100 bases:
>100_bases CATTCGCGCAGAAGTACGGCCCGTGGGCCGTGGTGGCCGGCGCATCCGACGGTCTGGGCGCCGCCTTCGCCGAGCGGATC GCAGAGAACGGCGTCAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTDRDDIADVLIRYATGIDRRDWPLFRTVFTDDCTLDYGDIGTFDGVDAVTEFMDQAHAMAGHTLHRLTNFAIDVGGDSA RARAYVDALIFAPDNASGVNAVGFYDDELVRTPAGWRIARRRFTTVRVSPVGGQS
Sequences:
>Translated_135_residues MTDRDDIADVLIRYATGIDRRDWPLFRTVFTDDCTLDYGDIGTFDGVDAVTEFMDQAHAMAGHTLHRLTNFAIDVGGDSA RARAYVDALIFAPDNASGVNAVGFYDDELVRTPAGWRIARRRFTTVRVSPVGGQS >Mature_134_residues TDRDDIADVLIRYATGIDRRDWPLFRTVFTDDCTLDYGDIGTFDGVDAVTEFMDQAHAMAGHTLHRLTNFAIDVGGDSAR ARAYVDALIFAPDNASGVNAVGFYDDELVRTPAGWRIARRRFTTVRVSPVGGQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14905; Mature: 14773
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRDDIADVLIRYATGIDRRDWPLFRTVFTDDCTLDYGDIGTFDGVDAVTEFMDQAHAM CCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHH AGHTLHRLTNFAIDVGGDSARARAYVDALIFAPDNASGVNAVGFYDDELVRTPAGWRIAR HHHHHHHHHHHEEECCCCCHHHHEEEEEEEECCCCCCCCEEEEECCCHHHCCCCCHHHHH RRFTTVRVSPVGGQS EEEEEEEEECCCCCC >Mature Secondary Structure TDRDDIADVLIRYATGIDRRDWPLFRTVFTDDCTLDYGDIGTFDGVDAVTEFMDQAHAM CCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHH AGHTLHRLTNFAIDVGGDSARARAYVDALIFAPDNASGVNAVGFYDDELVRTPAGWRIAR HHHHHHHHHHHEEECCCCCHHHHEEEEEEEECCCCCCCCEEEEECCCHHHCCCCCHHHHH RRFTTVRVSPVGGQS EEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]