| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763725
Identifier: 108763725
GI number: 108763725
Start: 6016463
End: 6017947
Strand: Direct
Name: 108763725
Synonym: MXAN_4808
Alternate gene names: NA
Gene position: 6016463-6017947 (Clockwise)
Preceding gene: 108759346
Following gene: 108762846
Centisome position: 65.83
GC content: 64.92
Gene sequence:
>1485_bases ATGGCCAACGAGACCCAGACCCAGAAGTCCACGGGCGTCGCCAATGACGCCTCGCTGTCCCTGCTCGACGAAATCCTGTC CGAGGCCAAGCTGAAGCCGAAGGACGAGGGTTACGACGTCGCCAAGCGCGGCGTGCAGGCCTTCATCACCGAGATGCTGG CGCCCAACCGCTCCGAGGAGCGCGTGGACAAGGCGCTCGTCGACGCGATGATTGCCGAAATCGACAAGCGCCTGTCCTCC CAGGTCAACGAAATCCTCCACGCGAAGGAGTTCCAGAAGCTGGAGTCCTCGTGGCGCTCGCTGAAGTTCATGGTGGACCG CACCGACTTCCGCGAGAACACCCGCGTGGAGATGCTGAACGCCTCCAAGGAAGACCTGCAGAAGGACTTCGAGGACGCGC CCGAGGTCACCAAGAGCGGCCTGTACAAGCTCGTGTACTCCAACGAGTACGGCGTCTTCGGTGGCAAGCCCTACGGCATC ATCTCCGCCAACTACGACTTCAACGTGGGCCCGCAGGACATGGAGCTGCTCCGCAAGTGCGCCTCCGTGGCCGCCATGGC GCACGCGCCCTTCATCGGCAATGCCGCGCCGGAAGTGTTCGGCGAGGAGAGCTTCCTCAAGCTGCCCGACCTGAAGGACC TCAAGTCGCTCTTCGAGGGTCCGCAGTACGCCCGGTGGCACTCGTTCCGTGAGAGCGAGGACGCGCGCTACGTGGGCCTG GCGCTGCCGCGCTTCCTGCTGCGCCTGCCCTACGGTGAGAAGACGGTGCCGGTGAAGGCCTTCAACTTCACCGAAGACGT CGTGGGCCACCACGAGCGCTACCTGTGGGGTCACGCCTCCGTGGCGCTCACCAGCCGCGTGGCGGACTCGTTCGCCAAGT TCCGCTGGAGCCCGAACATCATCGGTCCCCAGTCCGGCGGCGCGGTGGAGAACCTGCCGCTGCACCAGTACGAGGCCATG GGGGAGATCCAGACCAAGATTCCCACCGAGGTCATGCTCACCGAGCGGCGCGAGTTCGAGCTCTCCGAGGAGGGCTTCAT CGGCCTGGTGTTCCGCAAGGACTCCGACAACGCGGCCTTCTTCAGCGCCAACTCCACGCAGAAGCCCCGGTTCTTCGGCA ACACCCCGGAGGGCAAGGCGGCGGAGACCAACTATCGCCTGGGCACGCAGCTCCCTTACATGTTCATCATGACCCGCCTG GCGCACTACATCAAAGTGCTCCAGCGCGAGCAGATTGGTAGCTGGAAGGAGAAGTCGGACCTGGAGCGCGAGCTCAATCA CTGGCTCAGCCAGTACATCTCCGACATGGACGACCCTGCTCCCGCCGTGCGCTCGCGCCGCCCCCTGCGCGCCGCGCGCG TGGTGGTGGAGGACGTGGAGGGTCAGCCGGGCTGGTACCGCTGCAGCCTGCAGGTGCGCCCCCACTTCAAGTACATGGGT GCATCGTTCACCTTGTCCCTCGTGGGCAAGCTGGACAAGGAGTAG
Upstream 100 bases:
>100_bases CAGGCTCTGCTCGCCGACGAGGACGGACGCAAGGCGCTCATCAAGGAACTGGGTCTGACCGAAGAGACCAAGTAGCCCTT TCCGGGGGAACCGAATCACC
Downstream 100 bases:
>100_bases AGCCCGTTTCACCCAGCGTCGGTCATTTCAGCTAGTTTAGGGGCTCCAACAAGCCCAGGCTCAGGGTGAGCCTGGGTCCA CCAGCGCGCGGACGCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MANETQTQKSTGVANDASLSLLDEILSEAKLKPKDEGYDVAKRGVQAFITEMLAPNRSEERVDKALVDAMIAEIDKRLSS QVNEILHAKEFQKLESSWRSLKFMVDRTDFRENTRVEMLNASKEDLQKDFEDAPEVTKSGLYKLVYSNEYGVFGGKPYGI ISANYDFNVGPQDMELLRKCASVAAMAHAPFIGNAAPEVFGEESFLKLPDLKDLKSLFEGPQYARWHSFRESEDARYVGL ALPRFLLRLPYGEKTVPVKAFNFTEDVVGHHERYLWGHASVALTSRVADSFAKFRWSPNIIGPQSGGAVENLPLHQYEAM GEIQTKIPTEVMLTERREFELSEEGFIGLVFRKDSDNAAFFSANSTQKPRFFGNTPEGKAAETNYRLGTQLPYMFIMTRL AHYIKVLQREQIGSWKEKSDLERELNHWLSQYISDMDDPAPAVRSRRPLRAARVVVEDVEGQPGWYRCSLQVRPHFKYMG ASFTLSLVGKLDKE
Sequences:
>Translated_494_residues MANETQTQKSTGVANDASLSLLDEILSEAKLKPKDEGYDVAKRGVQAFITEMLAPNRSEERVDKALVDAMIAEIDKRLSS QVNEILHAKEFQKLESSWRSLKFMVDRTDFRENTRVEMLNASKEDLQKDFEDAPEVTKSGLYKLVYSNEYGVFGGKPYGI ISANYDFNVGPQDMELLRKCASVAAMAHAPFIGNAAPEVFGEESFLKLPDLKDLKSLFEGPQYARWHSFRESEDARYVGL ALPRFLLRLPYGEKTVPVKAFNFTEDVVGHHERYLWGHASVALTSRVADSFAKFRWSPNIIGPQSGGAVENLPLHQYEAM GEIQTKIPTEVMLTERREFELSEEGFIGLVFRKDSDNAAFFSANSTQKPRFFGNTPEGKAAETNYRLGTQLPYMFIMTRL AHYIKVLQREQIGSWKEKSDLERELNHWLSQYISDMDDPAPAVRSRRPLRAARVVVEDVEGQPGWYRCSLQVRPHFKYMG ASFTLSLVGKLDKE >Mature_493_residues ANETQTQKSTGVANDASLSLLDEILSEAKLKPKDEGYDVAKRGVQAFITEMLAPNRSEERVDKALVDAMIAEIDKRLSSQ VNEILHAKEFQKLESSWRSLKFMVDRTDFRENTRVEMLNASKEDLQKDFEDAPEVTKSGLYKLVYSNEYGVFGGKPYGII SANYDFNVGPQDMELLRKCASVAAMAHAPFIGNAAPEVFGEESFLKLPDLKDLKSLFEGPQYARWHSFRESEDARYVGLA LPRFLLRLPYGEKTVPVKAFNFTEDVVGHHERYLWGHASVALTSRVADSFAKFRWSPNIIGPQSGGAVENLPLHQYEAMG EIQTKIPTEVMLTERREFELSEEGFIGLVFRKDSDNAAFFSANSTQKPRFFGNTPEGKAAETNYRLGTQLPYMFIMTRLA HYIKVLQREQIGSWKEKSDLERELNHWLSQYISDMDDPAPAVRSRRPLRAARVVVEDVEGQPGWYRCSLQVRPHFKYMGA SFTLSLVGKLDKE
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56115; Mature: 55984
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANETQTQKSTGVANDASLSLLDEILSEAKLKPKDEGYDVAKRGVQAFITEMLAPNRSEE CCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH RVDKALVDAMIAEIDKRLSSQVNEILHAKEFQKLESSWRSLKFMVDRTDFRENTRVEMLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC ASKEDLQKDFEDAPEVTKSGLYKLVYSNEYGVFGGKPYGIISANYDFNVGPQDMELLRKC CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH ASVAAMAHAPFIGNAAPEVFGEESFLKLPDLKDLKSLFEGPQYARWHSFRESEDARYVGL HHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCEEHHH ALPRFLLRLPYGEKTVPVKAFNFTEDVVGHHERYLWGHASVALTSRVADSFAKFRWSPNI HHHHHHHHCCCCCCCCCEEEECCCHHHHCCHHHHEECCHHHHHHHHHHHHHHHHCCCCCC IGPQSGGAVENLPLHQYEAMGEIQTKIPTEVMLTERREFELSEEGFIGLVFRKDSDNAAF CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCEEEEEEECCCCCEE FSANSTQKPRFFGNTPEGKAAETNYRLGTQLPYMFIMTRLAHYIKVLQREQIGSWKEKSD EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LERELNHWLSQYISDMDDPAPAVRSRRPLRAARVVVEDVEGQPGWYRCSLQVRPHFKYMG HHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHCC ASFTLSLVGKLDKE CHHHHHHHHHCCCC >Mature Secondary Structure ANETQTQKSTGVANDASLSLLDEILSEAKLKPKDEGYDVAKRGVQAFITEMLAPNRSEE CCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH RVDKALVDAMIAEIDKRLSSQVNEILHAKEFQKLESSWRSLKFMVDRTDFRENTRVEMLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC ASKEDLQKDFEDAPEVTKSGLYKLVYSNEYGVFGGKPYGIISANYDFNVGPQDMELLRKC CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH ASVAAMAHAPFIGNAAPEVFGEESFLKLPDLKDLKSLFEGPQYARWHSFRESEDARYVGL HHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCEEHHH ALPRFLLRLPYGEKTVPVKAFNFTEDVVGHHERYLWGHASVALTSRVADSFAKFRWSPNI HHHHHHHHCCCCCCCCCEEEECCCHHHHCCHHHHEECCHHHHHHHHHHHHHHHHCCCCCC IGPQSGGAVENLPLHQYEAMGEIQTKIPTEVMLTERREFELSEEGFIGLVFRKDSDNAAF CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCEEEEEEECCCCCEE FSANSTQKPRFFGNTPEGKAAETNYRLGTQLPYMFIMTRLAHYIKVLQREQIGSWKEKSD EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LERELNHWLSQYISDMDDPAPAVRSRRPLRAARVVVEDVEGQPGWYRCSLQVRPHFKYMG HHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHCC ASFTLSLVGKLDKE CHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA