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The map label for this gene is hcpA [H]

Identifier: 108762846

GI number: 108762846

Start: 6018067

End: 6018558

Strand: Direct

Name: hcpA [H]

Synonym: MXAN_4809

Alternate gene names: 108762846

Gene position: 6018067-6018558 (Clockwise)

Preceding gene: 108763725

Following gene: 108762514

Centisome position: 65.84

GC content: 63.41

Gene sequence:

>492_bases
ATGGCTGAATCAGTACACCTGTACCTGAAGGCGAACGGCAGCGACATCAAGGGCGACAGCACGCAGACCAGCCTGGGCCG
CGCGGACTCCATCGAGTGCGTCGCGTACAGCCAGAAGGTCTTCACCGCTCGCGAGGCCGGTTCGGGTCTGGCGACGGGCC
GCCGCCAGTACGAGGGCATCGAAATCACCAAGCGCATCGACAAGTCGTCGCCGCTGCTGATGAAGGCCCTCTGCGAGAAC
CAGGTCATCGACGCGACCTTCAAGTTCTTCCGTCCGAACCCGACGGGCGACGGCACCACCGAGCAGTTCTACACGGTGTC
CATCAAGAAGGCCCGCATCAACGCCATCCAACAGACGGTGCCGAACTCCTTCGTGCCGGCGAGCACCAACCTGCCCCCGA
TGGAGACCCTCCAGCTGGTGTTCCACACCATCAACTGGACCATCACCCAGGGCGGCGTTACGCACGAGGACACCTGGGAC
ACCCAGCGTTGA

Upstream 100 bases:

>100_bases
CGGTCATTTCAGCTAGTTTAGGGGCTCCAACAAGCCCAGGCTCAGGGTGAGCCTGGGTCCACCAGCGCGCGGACGCGCGC
AAAGCGACGAGGTTGAAGTC

Downstream 100 bases:

>100_bases
TGTCAGTCCCTCCACCGGCCGTCCGTGCAAGTGGGCTCCGCGGGCGGCCGGGGGTTGGGGTACTCCGTTGTTGAAGGAAA
TCCATGGGCTCCCGAGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted protein hcp [H]

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAESVHLYLKANGSDIKGDSTQTSLGRADSIECVAYSQKVFTAREAGSGLATGRRQYEGIEITKRIDKSSPLLMKALCEN
QVIDATFKFFRPNPTGDGTTEQFYTVSIKKARINAIQQTVPNSFVPASTNLPPMETLQLVFHTINWTITQGGVTHEDTWD
TQR

Sequences:

>Translated_163_residues
MAESVHLYLKANGSDIKGDSTQTSLGRADSIECVAYSQKVFTAREAGSGLATGRRQYEGIEITKRIDKSSPLLMKALCEN
QVIDATFKFFRPNPTGDGTTEQFYTVSIKKARINAIQQTVPNSFVPASTNLPPMETLQLVFHTINWTITQGGVTHEDTWD
TQR
>Mature_162_residues
AESVHLYLKANGSDIKGDSTQTSLGRADSIECVAYSQKVFTAREAGSGLATGRRQYEGIEITKRIDKSSPLLMKALCENQ
VIDATFKFFRPNPTGDGTTEQFYTVSIKKARINAIQQTVPNSFVPASTNLPPMETLQLVFHTINWTITQGGVTHEDTWDT
QR

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 18045; Mature: 17914

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESVHLYLKANGSDIKGDSTQTSLGRADSIECVAYSQKVFTAREAGSGLATGRRQYEGI
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCHHCCCC
EITKRIDKSSPLLMKALCENQVIDATFKFFRPNPTGDGTTEQFYTVSIKKARINAIQQTV
CEEECCCCCCCHHHHHHHCCCEEEEEHEEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHC
PNSFVPASTNLPPMETLQLVFHTINWTITQGGVTHEDTWDTQR
CCCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
AESVHLYLKANGSDIKGDSTQTSLGRADSIECVAYSQKVFTAREAGSGLATGRRQYEGI
CCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCHHCCCC
EITKRIDKSSPLLMKALCENQVIDATFKFFRPNPTGDGTTEQFYTVSIKKARINAIQQTV
CEEECCCCCCCHHHHHHHCCCEEEEEHEEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHC
PNSFVPASTNLPPMETLQLVFHTINWTITQGGVTHEDTWDTQR
CCCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]