| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763646
Identifier: 108763646
GI number: 108763646
Start: 5949204
End: 5950547
Strand: Direct
Name: 108763646
Synonym: MXAN_4747
Alternate gene names: NA
Gene position: 5949204-5950547 (Clockwise)
Preceding gene: 108757959
Following gene: 108760085
Centisome position: 65.09
GC content: 67.34
Gene sequence:
>1344_bases ATGACCATCCAACTGACCAAGAAGGCATTCGTGGGGCTCTTCACCGTCCTGGGCCTGAGCGGCTGCGGGAGCCTGGACGT CCCGGACCTGAACAACCCCAGCCTCGATGACTTCCGCGAGCGGCCCACGCGCCCCGCGGTGCTCACCGCCGCCACGGGAT TGCTCCTCGGCCACCGCGCTGGTGTCGCCGCTCCCAACGGCTACGTGGCCCAGCTCGGCATCATCGGGCGCGAGGCGTAC GTCTTCGACCCCGCGGACCCGCGCGCCGTCGGCGAACTGCTGGGCCCTACCCTGGACCCTGGCGGCCCGGCGTTCGGCGG CAATCACTGGACCAACCCCTACCTGAACATCCGCAACGCCAACGCGCTGCTGGACTCCCTCGACCAGGTCCCCAACACGC CCGACGCTGAGAAGGAGGGCCTCCGCGGCTTCGCGAAGACGATGCAAGCCCTGGACTTCCTCGTGGTCATCAACACGCGG GACATTGAAGGGGCCCCCATCGACGTCAACCTGCCCATTGGCCAACTGGCCCCCATCGTCGGCAAGGAGGCGGTGTTCGA GCGCATCGCCGCCCTGCTCGACGAGGGCCACGCCCACCTGGGGAGCGCGGGTGAGTCCTTCCCGTTCCAGCTCAGCCCAG GCTTCGCCGGCTTCAACACGCCCACGACGTTCCGACAGTTCAACCGCGCGCTCGCCGCGCGAGTGGCTGTGTACCGGGGA CGCTACCCCGAGGCGCTCACCGCCCTGAGCCAGTCCTTCCTCAATCAGAGCGCATCGTTGGACCTGGGCGTCTATCACTC CTTCGGGACGAACTCCGGCGACACGGACAACGGCCTCATCAGCGTCAACGTCTACGCGCACCCGTCGATCGTCACTGACG CGGAGTTCCAGGAGAATGACACCGTGGATGACCGCGTCGTCCGGAAGCTCACGCGCCTGCCCGAGCCCAGGACCGCGGCG GACGGGAAGCTGTCGACGGAGTGGCGCTTCCGCATCTACCCCACGAACAACTCGCCCGTGCCCATCATCCGCAACGAGGA GCTCATCCTCCTGCGCGCCGAAGCCAACATTGGAGATCGGAACCTCGGACCGGCGGTGGACGACCTCAACTTCATCCGCA CCACCTCCGGCCGGCTGCCCCCGCGCCTGGACATCGATGAGAACAATGCCCTGGATGAGTTGCTGAAGCAGAAGCGGTAC TCGCTCCTGTTCGAGGGTGGCCACCGGTGGATTGACCTTCGGCGCTACGGGCGGCTCGACACGCTTCCCCGTGAGCTGGA CCCGGACATCGAGCCCCACGAGCGCTTCCCCATCCCCGCAGCGGAGATGAACGCGCGGCAGTAA
Upstream 100 bases:
>100_bases GAGCAACTTCGGCAACCAGGCCATCTCCCGCAACGTGGACGTGGCCCCCTTCCCTCCCAGCCGCAGCTTCTGGACCTCCC TCGACGTCGGGTTCTGAGCC
Downstream 100 bases:
>100_bases GCGCTGCTCGCAATCCCTGAAGCTCCAGGTGCACGGCAGACAGGCGTGCACCTGGAGCGCGGGCGCTCAGTCGCCCTGCT TCAGCCCGGCCCGTTCGGCG
Product: putative lipoprotein
Products: NA
Alternate protein names: SusD/RagB Family Protein
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MTIQLTKKAFVGLFTVLGLSGCGSLDVPDLNNPSLDDFRERPTRPAVLTAATGLLLGHRAGVAAPNGYVAQLGIIGREAY VFDPADPRAVGELLGPTLDPGGPAFGGNHWTNPYLNIRNANALLDSLDQVPNTPDAEKEGLRGFAKTMQALDFLVVINTR DIEGAPIDVNLPIGQLAPIVGKEAVFERIAALLDEGHAHLGSAGESFPFQLSPGFAGFNTPTTFRQFNRALAARVAVYRG RYPEALTALSQSFLNQSASLDLGVYHSFGTNSGDTDNGLISVNVYAHPSIVTDAEFQENDTVDDRVVRKLTRLPEPRTAA DGKLSTEWRFRIYPTNNSPVPIIRNEELILLRAEANIGDRNLGPAVDDLNFIRTTSGRLPPRLDIDENNALDELLKQKRY SLLFEGGHRWIDLRRYGRLDTLPRELDPDIEPHERFPIPAAEMNARQ
Sequences:
>Translated_447_residues MTIQLTKKAFVGLFTVLGLSGCGSLDVPDLNNPSLDDFRERPTRPAVLTAATGLLLGHRAGVAAPNGYVAQLGIIGREAY VFDPADPRAVGELLGPTLDPGGPAFGGNHWTNPYLNIRNANALLDSLDQVPNTPDAEKEGLRGFAKTMQALDFLVVINTR DIEGAPIDVNLPIGQLAPIVGKEAVFERIAALLDEGHAHLGSAGESFPFQLSPGFAGFNTPTTFRQFNRALAARVAVYRG RYPEALTALSQSFLNQSASLDLGVYHSFGTNSGDTDNGLISVNVYAHPSIVTDAEFQENDTVDDRVVRKLTRLPEPRTAA DGKLSTEWRFRIYPTNNSPVPIIRNEELILLRAEANIGDRNLGPAVDDLNFIRTTSGRLPPRLDIDENNALDELLKQKRY SLLFEGGHRWIDLRRYGRLDTLPRELDPDIEPHERFPIPAAEMNARQ >Mature_446_residues TIQLTKKAFVGLFTVLGLSGCGSLDVPDLNNPSLDDFRERPTRPAVLTAATGLLLGHRAGVAAPNGYVAQLGIIGREAYV FDPADPRAVGELLGPTLDPGGPAFGGNHWTNPYLNIRNANALLDSLDQVPNTPDAEKEGLRGFAKTMQALDFLVVINTRD IEGAPIDVNLPIGQLAPIVGKEAVFERIAALLDEGHAHLGSAGESFPFQLSPGFAGFNTPTTFRQFNRALAARVAVYRGR YPEALTALSQSFLNQSASLDLGVYHSFGTNSGDTDNGLISVNVYAHPSIVTDAEFQENDTVDDRVVRKLTRLPEPRTAAD GKLSTEWRFRIYPTNNSPVPIIRNEELILLRAEANIGDRNLGPAVDDLNFIRTTSGRLPPRLDIDENNALDELLKQKRYS LLFEGGHRWIDLRRYGRLDTLPRELDPDIEPHERFPIPAAEMNARQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48931; Mature: 48800
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQLTKKAFVGLFTVLGLSGCGSLDVPDLNNPSLDDFRERPTRPAVLTAATGLLLGHRA CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCC GVAAPNGYVAQLGIIGREAYVFDPADPRAVGELLGPTLDPGGPAFGGNHWTNPYLNIRNA CCCCCCCEEEEEEEECCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCH NALLDSLDQVPNTPDAEKEGLRGFAKTMQALDFLVVINTRDIEGAPIDVNLPIGQLAPIV HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCEEEECCHHHHHHHH GKEAVFERIAALLDEGHAHLGSAGESFPFQLSPGFAGFNTPTTFRQFNRALAARVAVYRG HHHHHHHHHHHHHHCCCHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC RYPEALTALSQSFLNQSASLDLGVYHSFGTNSGDTDNGLISVNVYAHPSIVTDAEFQEND CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCC TVDDRVVRKLTRLPEPRTAADGKLSTEWRFRIYPTNNSPVPIIRNEELILLRAEANIGDR CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCEEEEEECCCCCCC NLGPAVDDLNFIRTTSGRLPPRLDIDENNALDELLKQKRYSLLFEGGHRWIDLRRYGRLD CCCCCHHCCHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEEHHHCCCCC TLPRELDPDIEPHERFPIPAAEMNARQ CCCHHCCCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure TIQLTKKAFVGLFTVLGLSGCGSLDVPDLNNPSLDDFRERPTRPAVLTAATGLLLGHRA EEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCC GVAAPNGYVAQLGIIGREAYVFDPADPRAVGELLGPTLDPGGPAFGGNHWTNPYLNIRNA CCCCCCCEEEEEEEECCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCH NALLDSLDQVPNTPDAEKEGLRGFAKTMQALDFLVVINTRDIEGAPIDVNLPIGQLAPIV HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCEEEECCHHHHHHHH GKEAVFERIAALLDEGHAHLGSAGESFPFQLSPGFAGFNTPTTFRQFNRALAARVAVYRG HHHHHHHHHHHHHHCCCHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC RYPEALTALSQSFLNQSASLDLGVYHSFGTNSGDTDNGLISVNVYAHPSIVTDAEFQEND CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCC TVDDRVVRKLTRLPEPRTAADGKLSTEWRFRIYPTNNSPVPIIRNEELILLRAEANIGDR CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCEEEEEECCCCCCC NLGPAVDDLNFIRTTSGRLPPRLDIDENNALDELLKQKRYSLLFEGGHRWIDLRRYGRLD CCCCCHHCCHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEEHHHCCCCC TLPRELDPDIEPHERFPIPAAEMNARQ CCCHHCCCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA