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The map label for this gene is rpmF

Identifier: 108760085

GI number: 108760085

Start: 5973629

End: 5973817

Strand: Direct

Name: rpmF

Synonym: MXAN_4773

Alternate gene names: 108760085

Gene position: 5973629-5973817 (Clockwise)

Preceding gene: 108763646

Following gene: 108761746

Centisome position: 65.36

GC content: 66.14

Gene sequence:

>189_bases
GTGGGTGTCCCCAAGAAGCGTACTTCGAAGATGCGTCGCGACCGCCGCCGTGCGGCCAACAACAACCTGCGGAGCGCCGT
GCAGGTGACCAAGTGCCCGAACTGCAAGGAGCCGGTGATGCCTCACCGCGCCTGCACGTCCTGTGGCCAGTACAAGGGCC
GTGAAGTGGTCGCTCAGGCCGAGGCCTGA

Upstream 100 bases:

>100_bases
CAGGGAGCCGGGGACCCCGGCACAGCGCGAAAGACATTGGACTCAACCGGTCCGGACCGGCGCGAACGCTCCGGGTCGGG
GTCGAATATAGAGGTGAGCC

Downstream 100 bases:

>100_bases
CACACAGTCACATACAGCGCCCTTCCCGGGCGCTGCGAAACACGACGGGCCGCGTCTCCATCCAGTGGAGGCCGCGGCCC
TTGTCGTTTCAGGGCCCCCT

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MGVPKKRTSKMRRDRRRAANNNLRSAVQVTKCPNCKEPVMPHRACTSCGQYKGREVVAQAEA

Sequences:

>Translated_62_residues
MGVPKKRTSKMRRDRRRAANNNLRSAVQVTKCPNCKEPVMPHRACTSCGQYKGREVVAQAEA
>Mature_61_residues
GVPKKRTSKMRRDRRRAANNNLRSAVQVTKCPNCKEPVMPHRACTSCGQYKGREVVAQAEA

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_MYXXD (Q1D338)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_632935.1
- ProteinModelPortal:   Q1D338
- SMR:   Q1D338
- STRING:   Q1D338
- GeneID:   4104363
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_4773
- TIGR:   MXAN_4773
- eggNOG:   NOG78241
- HOGENOM:   HBG728381
- OMA:   VISHRAC
- ProtClustDB:   PRK12286
- BioCyc:   MXAN246197:MXAN_4773-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6972; Mature: 6841

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
11.3 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVPKKRTSKMRRDRRRAANNNLRSAVQVTKCPNCKEPVMPHRACTSCGQYKGREVVAQA
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHCCC
EA
CC
>Mature Secondary Structure 
GVPKKRTSKMRRDRRRAANNNLRSAVQVTKCPNCKEPVMPHRACTSCGQYKGREVVAQA
CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHCCC
EA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA