| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763582
Identifier: 108763582
GI number: 108763582
Start: 1644939
End: 1646534
Strand: Reverse
Name: 108763582
Synonym: MXAN_1397
Alternate gene names: NA
Gene position: 1646534-1644939 (Counterclockwise)
Preceding gene: 108761444
Following gene: 108763940
Centisome position: 18.02
GC content: 70.68
Gene sequence:
>1596_bases ATGACCCGCTCTCTGACCGCGTTGTGTATTGCGCTCTCGTTCCTGATGTTGGCTGGGTGCAAGGGGGACCCAGCGACCCC GGAGTACTGGGAGTCAGGCATTCAGCAGAGCCGCAGAGCGGAGGACCGCATCCGCATGGTGGAGGCCATGCGTTCGTCCG GGAAGATGGACGAGCGTTTCCTGCCCATGCTCCACGGGCAGCTCGGCACCGAGCGCAAGCCGGAGGTGCGCGCCGCGCTG GCCCGCGCGTTGGGAGACTTGAAGCATGCCTCTTCGGTGGAGCCGCTGACGAAGGCCCTGGACCCGGCGGCGGGCGACAT GCCCGCGCAGTTGGCGAACAAGGCCATTGTCGCGACGCTGGGGGCCATTGGTGACCGCCGCGCCATCCCCGCGCTGGTGC CGCTGCTGCGCGCGAAGGACAACTACACGCGCATCGAGGCGGTGCAGGTGCTGGGCGACATGAAGGCGAAGGAAGCGGTG GAGCCGCTCATCACCCTGGCCACGGACGACACCGTGGAGCCCTTCCTCAACAAGAAGGCCATTGAGGCCCTGGGTGACAT CGGTGACGGCCGCGCGGCGCCCGCGCTGGTGCGGATGCTGACCAAGGAGCGCAAGGGCAAGTCCTTCTACGTGGAGAGCT CCTTCGCGCTGTACCAACTGGGCGCGCCCGCGGCGGACGCGCTGCTTCAGGCGTTGGAGGGCCAGGACGCGGACCTGCTG AAGTGGGCGCGGTCGAACGGCGTCAACCCGGCCAGCTACGCGATGAAGGCGGCGACGGTGCTGGGCGACCTGCGGGAGAA GCGGGCGGTGGCCACGCTGTTGAAGCAACTGGCCTTCACCAACACGGACCCGCAGATTCAGGCGCTGGTGCGGATGCAGG CCGCGGACGCGCTGGCGCGCATGCGCGCACAGGAGGCGGTGAAGCCACTGGCCGGGCTCGTGTCGGAGACGGACGCCACC GTGAGGGATTCCTACGTGAGCGCCCTGGTGCGCCTGGGCGGACGCGACGCACTGCCCGCGCTGGAGAAGGCCGCGGGCAC CGGAGACTGGTACGCGCGCGAGTTGGCGGTGAAGGGCATCGCCATGCTGGGCGACGCGCGCGAGCTGCCCTTGTTGCAGA AGCTCGCCGCGGCCGAGCCGGCGCGGACGGCGGCGGACTGCAAGCAGGCGGAGGACGAAGGCTGCGATGACGCGGCCGCG CTGGGCAAGCAGCGCGCGGACCAGATTGCGGGCCAGTCCAAGCTGCTGGAGGCCGCGCAGGCGTGCGGGGGCAACGCGGG CTGCTGGGTGCAGCGCATGGAGAAGGCGGAGCCGCGAATGCTGGAGCGCGCGGCGCTGGAGGTCGGCCGTTCGGGCGCGG CCGAGCACGCGGGCGCGCTGGCCTCGCGACTGGGAGAGCGCGACACCGAGGCCCGTCTCGCGCTCGTCCTCGCGGTGGGC TGGCTGGTGGAAGGCTCGCAGGACGTCGCGAAGAAGCTGCGCGAGGCCTCCCTGCCCACGATGCGAAAGCAGCTCGCGGA CGAGCAGGGCAACACCCGGTTCGTCAGCGTCAACGAGGACCTGCGGCGCCTGGTGACGACGCTCGACCGGCCCTGA
Upstream 100 bases:
>100_bases GTTGACCAGCGTACCCCAGGTGCCTGGGGCGGTTTGCTTCCTTCCTCGCGCGAGGTTTACACGGAAGACAGGACAACCTC GCAGACGCAATGGAGACCGC
Downstream 100 bases:
>100_bases CGCCCTCCTTGAGCCGCAGCGGCGGGACACGCTCCGCCGCGTGGTGCAGCACGGTGAGCTGTCGCACGAGCCGCTCCACG TGCGCGCGCGACAGCGCATC
Product: HEAT repeat-containing PBS lyase
Products: NA
Alternate protein names: PBS Lyase HEAT-Like Repeat Domain Protein; Phycocyanin Alpha Phycocyanobilin Lyase Related Protein; HEAT Repeat-Containing Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein; Pbs Lyase Heat-Like Repeat Protein; Peptidase; Signal Transduction Protein; PBS Lyase HEAT Domain-Containing Protein
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MTRSLTALCIALSFLMLAGCKGDPATPEYWESGIQQSRRAEDRIRMVEAMRSSGKMDERFLPMLHGQLGTERKPEVRAAL ARALGDLKHASSVEPLTKALDPAAGDMPAQLANKAIVATLGAIGDRRAIPALVPLLRAKDNYTRIEAVQVLGDMKAKEAV EPLITLATDDTVEPFLNKKAIEALGDIGDGRAAPALVRMLTKERKGKSFYVESSFALYQLGAPAADALLQALEGQDADLL KWARSNGVNPASYAMKAATVLGDLREKRAVATLLKQLAFTNTDPQIQALVRMQAADALARMRAQEAVKPLAGLVSETDAT VRDSYVSALVRLGGRDALPALEKAAGTGDWYARELAVKGIAMLGDARELPLLQKLAAAEPARTAADCKQAEDEGCDDAAA LGKQRADQIAGQSKLLEAAQACGGNAGCWVQRMEKAEPRMLERAALEVGRSGAAEHAGALASRLGERDTEARLALVLAVG WLVEGSQDVAKKLREASLPTMRKQLADEQGNTRFVSVNEDLRRLVTTLDRP
Sequences:
>Translated_531_residues MTRSLTALCIALSFLMLAGCKGDPATPEYWESGIQQSRRAEDRIRMVEAMRSSGKMDERFLPMLHGQLGTERKPEVRAAL ARALGDLKHASSVEPLTKALDPAAGDMPAQLANKAIVATLGAIGDRRAIPALVPLLRAKDNYTRIEAVQVLGDMKAKEAV EPLITLATDDTVEPFLNKKAIEALGDIGDGRAAPALVRMLTKERKGKSFYVESSFALYQLGAPAADALLQALEGQDADLL KWARSNGVNPASYAMKAATVLGDLREKRAVATLLKQLAFTNTDPQIQALVRMQAADALARMRAQEAVKPLAGLVSETDAT VRDSYVSALVRLGGRDALPALEKAAGTGDWYARELAVKGIAMLGDARELPLLQKLAAAEPARTAADCKQAEDEGCDDAAA LGKQRADQIAGQSKLLEAAQACGGNAGCWVQRMEKAEPRMLERAALEVGRSGAAEHAGALASRLGERDTEARLALVLAVG WLVEGSQDVAKKLREASLPTMRKQLADEQGNTRFVSVNEDLRRLVTTLDRP >Mature_530_residues TRSLTALCIALSFLMLAGCKGDPATPEYWESGIQQSRRAEDRIRMVEAMRSSGKMDERFLPMLHGQLGTERKPEVRAALA RALGDLKHASSVEPLTKALDPAAGDMPAQLANKAIVATLGAIGDRRAIPALVPLLRAKDNYTRIEAVQVLGDMKAKEAVE PLITLATDDTVEPFLNKKAIEALGDIGDGRAAPALVRMLTKERKGKSFYVESSFALYQLGAPAADALLQALEGQDADLLK WARSNGVNPASYAMKAATVLGDLREKRAVATLLKQLAFTNTDPQIQALVRMQAADALARMRAQEAVKPLAGLVSETDATV RDSYVSALVRLGGRDALPALEKAAGTGDWYARELAVKGIAMLGDARELPLLQKLAAAEPARTAADCKQAEDEGCDDAAAL GKQRADQIAGQSKLLEAAQACGGNAGCWVQRMEKAEPRMLERAALEVGRSGAAEHAGALASRLGERDTEARLALVLAVGW LVEGSQDVAKKLREASLPTMRKQLADEQGNTRFVSVNEDLRRLVTTLDRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56874; Mature: 56743
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSLTALCIALSFLMLAGCKGDPATPEYWESGIQQSRRAEDRIRMVEAMRSSGKMDERF CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LPMLHGQLGTERKPEVRAALARALGDLKHASSVEPLTKALDPAAGDMPAQLANKAIVATL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHH GAIGDRRAIPALVPLLRAKDNYTRIEAVQVLGDMKAKEAVEPLITLATDDTVEPFLNKKA HHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IEALGDIGDGRAAPALVRMLTKERKGKSFYVESSFALYQLGAPAADALLQALEGQDADLL HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCHHHHHHHHHCCCCHHHH KWARSNGVNPASYAMKAATVLGDLREKRAVATLLKQLAFTNTDPQIQALVRMQAADALAR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MRAQEAVKPLAGLVSETDATVRDSYVSALVRLGGRDALPALEKAAGTGDWYARELAVKGI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHH AMLGDARELPLLQKLAAAEPARTAADCKQAEDEGCDDAAALGKQRADQIAGQSKLLEAAQ HHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ACGGNAGCWVQRMEKAEPRMLERAALEVGRSGAAEHAGALASRLGERDTEARLALVLAVG HCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH WLVEGSQDVAKKLREASLPTMRKQLADEQGNTRFVSVNEDLRRLVTTLDRP HHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCC >Mature Secondary Structure TRSLTALCIALSFLMLAGCKGDPATPEYWESGIQQSRRAEDRIRMVEAMRSSGKMDERF CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LPMLHGQLGTERKPEVRAALARALGDLKHASSVEPLTKALDPAAGDMPAQLANKAIVATL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHH GAIGDRRAIPALVPLLRAKDNYTRIEAVQVLGDMKAKEAVEPLITLATDDTVEPFLNKKA HHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IEALGDIGDGRAAPALVRMLTKERKGKSFYVESSFALYQLGAPAADALLQALEGQDADLL HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCHHHHHHHHHCCCCHHHH KWARSNGVNPASYAMKAATVLGDLREKRAVATLLKQLAFTNTDPQIQALVRMQAADALAR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MRAQEAVKPLAGLVSETDATVRDSYVSALVRLGGRDALPALEKAAGTGDWYARELAVKGI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHH AMLGDARELPLLQKLAAAEPARTAADCKQAEDEGCDDAAALGKQRADQIAGQSKLLEAAQ HHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ACGGNAGCWVQRMEKAEPRMLERAALEVGRSGAAEHAGALASRLGERDTEARLALVLAVG HCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH WLVEGSQDVAKKLREASLPTMRKQLADEQGNTRFVSVNEDLRRLVTTLDRP HHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA