Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is 108763265

Identifier: 108763265

GI number: 108763265

Start: 6007095

End: 6008462

Strand: Direct

Name: 108763265

Synonym: MXAN_4802

Alternate gene names: NA

Gene position: 6007095-6008462 (Clockwise)

Preceding gene: 108761628

Following gene: 108762493

Centisome position: 65.72

GC content: 69.66

Gene sequence:

>1368_bases
ATGAAGTCCGTGCAGCGAGTCGTCTGGTCGGAGGGCATGTTCATGAGCCCCCACCACCTCCAGCAGCAGGACCTCTACCA
CGAGCAACTGCTGGATCAGCGGCTGGCCTCGCTCGAACCGTATCCCTGGGGCGTCGTGGCCCTGGAGTTCGACATGGAGG
CGCTGCGCGCCGGCCAGGTGCAGCTGACCCACTTCACCGGCATCCTCCCCGACGGGCTGCCGGTCTCCTTCGAGTCCGGA
GACGCGGAGGCGCCGCCCGCTCGGCCCGCGGATGGCTACTTCCCGCCCGCCCAGCGCACCCTGGACGTGTACCTGGGCGT
GCCGCGCGAACGCAGCGGCGTGGAGAGCTTCGGCAGCGGGGAGCGGCTGGGCAGCAGCCCGCGCTACACCCCCGCCTCCC
GCCCCGTCAGTGATTTGACGGCCTCCACCTCCATCTCGCAGGTGGCCTTCGGTCAGCGCAACGTGCGCCTGCTGTTCGGC
ACCGAGCCGCGCGACGACTTCGAGTCCATCAAGCTGTGCGAGCTGTCCCGCGACCGCTCCGGCAACCTGATGCTGGTGGA
GTCCTTCATCCCGCCGTGCCTGCGCATCGACGCGTCCCCGTTCGTCATGAACGAGCTGCGGACGATGTTGCGGCTGATGG
TGTCCAAGCAGCGGCAGTTGTCCTCGCGGCGGCGGCACCGGGACGCCTCGGCGCTGGAGTTCACCGCGGGCGACGTGACG
CTCTTCCTGGAGCTCAACGCGCTCAACGGCACCATCCCCTTCATCCAGCACGCGCTGGACGCGGGCAACCTGCGGCCCAG
GGACTTGTACCTGGCGCTGGCGCAGTGCGCGGGGCAATTGTGCACCTTCTCCGTCAGCGCGGACCCGTCCACGCTGCCCA
CCTTCCAGTTCACCAACCTGCGCGCCACCTTCGAGGAGCTGTTCCGCCGCCTCTCCGAGCTGATGCGCGCGGTGGCGCTG
GAGCAGTGCCTGTCGGTGGACCTGACGGCGGGCGCAGACGGCATGTTCCGCGGCCGGCTGGAGGACGACCGGCTGGAGCG
CTGCGGCCACTTCATCCTCGCGGTGCGCAGCGAGCTGCCGGAGCGGGTGGTGGCCGAGCAGCTCCCCAAGCTGTCGAAGG
TGGCCGCCTGGGAGGACATCCGCGCGCTGGTGCAGGCCGCCGCGCCCGGCGTGCCGCTGGCGGTGACGTACCGGCCACCG
CCCGAAGTCCCCGTGCAGCCAGGCACCGTCTACTTCAGCCTCTCCATGAATGACGGCTACTGGAGGAACGTGATGCGGGA
CCGCAACCTCGCCATCTACCTCCCGCAGCCGTTCGACGCGAACCGAACGACCGTGGAACTGCTCGCGGTTCCCACCGCCA
ATCGCTGA

Upstream 100 bases:

>100_bases
AAGGCTATCAGATTGACCTGATGTTCCGGCCCATGACGCAGGCGCCGGAGCCTCGACTCCAACCCCAAGCAGGCGACGGC
GTGTCGCCGCGGAGAGGTGT

Downstream 100 bases:

>100_bases
CGCCCCGAGCCGCCCATGGACCGAGTCACCGAAGCCACGAAGGATTGTTTCGACGCCGCCATCCAACTGCGCGGCTCCGA
AGCCTCGGCGGTGCCCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; T6ss M; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MKSVQRVVWSEGMFMSPHHLQQQDLYHEQLLDQRLASLEPYPWGVVALEFDMEALRAGQVQLTHFTGILPDGLPVSFESG
DAEAPPARPADGYFPPAQRTLDVYLGVPRERSGVESFGSGERLGSSPRYTPASRPVSDLTASTSISQVAFGQRNVRLLFG
TEPRDDFESIKLCELSRDRSGNLMLVESFIPPCLRIDASPFVMNELRTMLRLMVSKQRQLSSRRRHRDASALEFTAGDVT
LFLELNALNGTIPFIQHALDAGNLRPRDLYLALAQCAGQLCTFSVSADPSTLPTFQFTNLRATFEELFRRLSELMRAVAL
EQCLSVDLTAGADGMFRGRLEDDRLERCGHFILAVRSELPERVVAEQLPKLSKVAAWEDIRALVQAAAPGVPLAVTYRPP
PEVPVQPGTVYFSLSMNDGYWRNVMRDRNLAIYLPQPFDANRTTVELLAVPTANR

Sequences:

>Translated_455_residues
MKSVQRVVWSEGMFMSPHHLQQQDLYHEQLLDQRLASLEPYPWGVVALEFDMEALRAGQVQLTHFTGILPDGLPVSFESG
DAEAPPARPADGYFPPAQRTLDVYLGVPRERSGVESFGSGERLGSSPRYTPASRPVSDLTASTSISQVAFGQRNVRLLFG
TEPRDDFESIKLCELSRDRSGNLMLVESFIPPCLRIDASPFVMNELRTMLRLMVSKQRQLSSRRRHRDASALEFTAGDVT
LFLELNALNGTIPFIQHALDAGNLRPRDLYLALAQCAGQLCTFSVSADPSTLPTFQFTNLRATFEELFRRLSELMRAVAL
EQCLSVDLTAGADGMFRGRLEDDRLERCGHFILAVRSELPERVVAEQLPKLSKVAAWEDIRALVQAAAPGVPLAVTYRPP
PEVPVQPGTVYFSLSMNDGYWRNVMRDRNLAIYLPQPFDANRTTVELLAVPTANR
>Mature_455_residues
MKSVQRVVWSEGMFMSPHHLQQQDLYHEQLLDQRLASLEPYPWGVVALEFDMEALRAGQVQLTHFTGILPDGLPVSFESG
DAEAPPARPADGYFPPAQRTLDVYLGVPRERSGVESFGSGERLGSSPRYTPASRPVSDLTASTSISQVAFGQRNVRLLFG
TEPRDDFESIKLCELSRDRSGNLMLVESFIPPCLRIDASPFVMNELRTMLRLMVSKQRQLSSRRRHRDASALEFTAGDVT
LFLELNALNGTIPFIQHALDAGNLRPRDLYLALAQCAGQLCTFSVSADPSTLPTFQFTNLRATFEELFRRLSELMRAVAL
EQCLSVDLTAGADGMFRGRLEDDRLERCGHFILAVRSELPERVVAEQLPKLSKVAAWEDIRALVQAAAPGVPLAVTYRPP
PEVPVQPGTVYFSLSMNDGYWRNVMRDRNLAIYLPQPFDANRTTVELLAVPTANR

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50795; Mature: 50795

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVQRVVWSEGMFMSPHHLQQQDLYHEQLLDQRLASLEPYPWGVVALEFDMEALRAGQV
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCE
QLTHFTGILPDGLPVSFESGDAEAPPARPADGYFPPAQRTLDVYLGVPRERSGVESFGSG
EEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCCHHCCCC
ERLGSSPRYTPASRPVSDLTASTSISQVAFGQRNVRLLFGTEPRDDFESIKLCELSRDRS
CCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCEEEEECCCCCCCHHHEEHEECCCCCC
GNLMLVESFIPPCLRIDASPFVMNELRTMLRLMVSKQRQLSSRRRHRDASALEFTAGDVT
CCEEEEHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEE
LFLELNALNGTIPFIQHALDAGNLRPRDLYLALAQCAGQLCTFSVSADPSTLPTFQFTNL
EEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECHH
RATFEELFRRLSELMRAVALEQCLSVDLTAGADGMFRGRLEDDRLERCGHFILAVRSELP
HHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHCH
ERVVAEQLPKLSKVAAWEDIRALVQAAAPGVPLAVTYRPPPEVPVQPGTVYFSLSMNDGY
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCH
WRNVMRDRNLAIYLPQPFDANRTTVELLAVPTANR
HHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKSVQRVVWSEGMFMSPHHLQQQDLYHEQLLDQRLASLEPYPWGVVALEFDMEALRAGQV
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCE
QLTHFTGILPDGLPVSFESGDAEAPPARPADGYFPPAQRTLDVYLGVPRERSGVESFGSG
EEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCCHHCCCC
ERLGSSPRYTPASRPVSDLTASTSISQVAFGQRNVRLLFGTEPRDDFESIKLCELSRDRS
CCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCEEEEECCCCCCCHHHEEHEECCCCCC
GNLMLVESFIPPCLRIDASPFVMNELRTMLRLMVSKQRQLSSRRRHRDASALEFTAGDVT
CCEEEEHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEE
LFLELNALNGTIPFIQHALDAGNLRPRDLYLALAQCAGQLCTFSVSADPSTLPTFQFTNL
EEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEECHH
RATFEELFRRLSELMRAVALEQCLSVDLTAGADGMFRGRLEDDRLERCGHFILAVRSELP
HHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHCH
ERVVAEQLPKLSKVAAWEDIRALVQAAAPGVPLAVTYRPPPEVPVQPGTVYFSLSMNDGY
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCH
WRNVMRDRNLAIYLPQPFDANRTTVELLAVPTANR
HHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA