| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757915
Identifier: 108757915
GI number: 108757915
Start: 6019075
End: 6020826
Strand: Direct
Name: 108757915
Synonym: MXAN_4811
Alternate gene names: NA
Gene position: 6019075-6020826 (Clockwise)
Preceding gene: 108762514
Following gene: 108762900
Centisome position: 65.86
GC content: 69.18
Gene sequence:
>1752_bases ATGTTCAGCAAGTATTACCTGAGCGAGCTGTCGTACCTGCGGGAGATGGGACGGGCCTTCGGGCTGGCCAACCCCTCTGT CGCGGGCCTGTTGGTGGAGCGCGGCGCGGACCCGGACGTGGAGCGGCTGCTGGAGGGCTTCGCGTTCCTCGCGGCCCGCA TCCGCGAGCGCGTGGACGACGACGTGCCGGAGCTGGTGCACGGGCTCACCGAGCTGCTGCTACCGCACTACCTGCGCCCG CTGCCGGCCTCCACCATCGTCGAGTTCACCCCGCACCTGCGCGCGCTGCGCGGCCGCTCGCGGCTGGCCGCCGGGGCGGA GGTGGCGTCGCAGCCGATTGACGGCACCAGTTGCGTCTTCCGCACCACCACGGACGTGGACCTGCTGCCGGTGCAGCTCA CCGACGCACTCCTGGACCGGTCGTCCATCACCGCGCCGGTGCTGCGCCTCTATTTCCAGACGACGGAGCAGGGCCGCGCG GAGGTGTTGCGCGAGCAAGGCCTGCGCCTGTTCATCCACGCCGACCTGTCCGCTGCGTCGGTGGTGCTGCTGTGGTTGCT CCGCTACTGCCGCCAGGTGCGCGTGCGCGGCGCGTCTGGCCAGGGAGACGGCATCAAGCTGCCGGTGAATGCCATCCAAC CGGTGGGCTTCCACCGGGACTTCAAGCTGCTGCCCTGGCCGCGCGCCAGCGAGGGCTACCGGCACCTCCAGGAGTACCTG ACGCTGCCGGAGAAGTTCCTGTTCTTCGAGGTGCGCGGGCTGGACGCCGCCGCCGGGCTGAAAGAGGACCGCTTCGAGAT TGCCTTCCACCTGGAGCGGCCGCCGCCCCTGGATGCGCGCATCCACCGGGAGATGTTCCGGCTACATTGCGCCCCCGTGG TGAACCTCTTCAGCGTGCCGGCGGACCCCATCCTCCACCGCACGCTGGACCGGGAGCACCTGCTGCGCGCGTCCGACCTG CCCCCCAACCACGCGGAGATTTACTCGGTGGACTCGGTGACGGGCCTGAAGGCCGGACGCAACGAGCGGCGCGTCTACCG GCCCTTCTACGAGTTCACCCACACCGCGGGCGGGGACGCCGAGCAGTCCTTCTATCGGCTGCGCCGGGCGCCTTCGCCGC TGGACGAAGGAATCGACACGTACATTACGCTGGAGACGCCGCGGAACATCGCGCCGGAGGTCAACGCCGAGGAAGCGCTG TCCATGGACCTGACGTGCACCAACCGCTCGCTGCCCTCGCGGCTGCAGGTGGGTGACTTGACGGCATCCACCTCCGCCAG CCCCACGCAGGCGAAGTTCAAGAACATCTCCCCGGTGAGCCGGCCCGCGCGCGCGCCGCTGGGCACCGAACTGCACTGGC GGCTCCTGTCGCACCTGGCCATCAACCAGCACTCGCTGGCGGACGCGGCCGCACTGCGGCGGCTGATGGACCTGTACAAC TTCCATTCGCTCACCGACAACCTGGCGGCGCGCGCCAGCCGCCTGCGCATCAACGCCATCCGCGCGGTGGAGACGAAGCC GGTGACGCGCTTCCTGGAGGGCGCGCCGCTGCGGGGTCACCGCACCCGCGTGGACCTGGACGAAGAGAACTTCATGGGCG TGGGCGATTCGTTCCTCTTCGGCTCCGTGCTGGAGGAACTGCTCGCCTCCCACGTCACCATCAACTCCTTCAACGAGCTG AGCATCCGGCTTCACCCCTCGCAGACGGAGTTCGCGTGGCTTCCGAGGAACGGCTCCCAGACGCTTTTGTAG
Upstream 100 bases:
>100_bases CGACGAGGCATGGTGCGTTTCCATACCCAGGTGCACCCGGGCGGACGCGTGGACCTGTGGTGAGCCGGGTGAATCCAGGG GTGCGTGGCGGAGGGCGAGG
Downstream 100 bases:
>100_bases AGACGGCCCAGAAGCTGGCCGAGCTGGCGCCCCGGGTGGGCTTCTTTCCCCTGGTGGCGTTCTTGGAGCGGCTGACGTCG CAGGCCACGCGCGTGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; Type VI Secretion System; LOW QUALITY PROTEIN Type VI Secretion Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; T6ss C; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MFSKYYLSELSYLREMGRAFGLANPSVAGLLVERGADPDVERLLEGFAFLAARIRERVDDDVPELVHGLTELLLPHYLRP LPASTIVEFTPHLRALRGRSRLAAGAEVASQPIDGTSCVFRTTTDVDLLPVQLTDALLDRSSITAPVLRLYFQTTEQGRA EVLREQGLRLFIHADLSAASVVLLWLLRYCRQVRVRGASGQGDGIKLPVNAIQPVGFHRDFKLLPWPRASEGYRHLQEYL TLPEKFLFFEVRGLDAAAGLKEDRFEIAFHLERPPPLDARIHREMFRLHCAPVVNLFSVPADPILHRTLDREHLLRASDL PPNHAEIYSVDSVTGLKAGRNERRVYRPFYEFTHTAGGDAEQSFYRLRRAPSPLDEGIDTYITLETPRNIAPEVNAEEAL SMDLTCTNRSLPSRLQVGDLTASTSASPTQAKFKNISPVSRPARAPLGTELHWRLLSHLAINQHSLADAAALRRLMDLYN FHSLTDNLAARASRLRINAIRAVETKPVTRFLEGAPLRGHRTRVDLDEENFMGVGDSFLFGSVLEELLASHVTINSFNEL SIRLHPSQTEFAWLPRNGSQTLL
Sequences:
>Translated_583_residues MFSKYYLSELSYLREMGRAFGLANPSVAGLLVERGADPDVERLLEGFAFLAARIRERVDDDVPELVHGLTELLLPHYLRP LPASTIVEFTPHLRALRGRSRLAAGAEVASQPIDGTSCVFRTTTDVDLLPVQLTDALLDRSSITAPVLRLYFQTTEQGRA EVLREQGLRLFIHADLSAASVVLLWLLRYCRQVRVRGASGQGDGIKLPVNAIQPVGFHRDFKLLPWPRASEGYRHLQEYL TLPEKFLFFEVRGLDAAAGLKEDRFEIAFHLERPPPLDARIHREMFRLHCAPVVNLFSVPADPILHRTLDREHLLRASDL PPNHAEIYSVDSVTGLKAGRNERRVYRPFYEFTHTAGGDAEQSFYRLRRAPSPLDEGIDTYITLETPRNIAPEVNAEEAL SMDLTCTNRSLPSRLQVGDLTASTSASPTQAKFKNISPVSRPARAPLGTELHWRLLSHLAINQHSLADAAALRRLMDLYN FHSLTDNLAARASRLRINAIRAVETKPVTRFLEGAPLRGHRTRVDLDEENFMGVGDSFLFGSVLEELLASHVTINSFNEL SIRLHPSQTEFAWLPRNGSQTLL >Mature_583_residues MFSKYYLSELSYLREMGRAFGLANPSVAGLLVERGADPDVERLLEGFAFLAARIRERVDDDVPELVHGLTELLLPHYLRP LPASTIVEFTPHLRALRGRSRLAAGAEVASQPIDGTSCVFRTTTDVDLLPVQLTDALLDRSSITAPVLRLYFQTTEQGRA EVLREQGLRLFIHADLSAASVVLLWLLRYCRQVRVRGASGQGDGIKLPVNAIQPVGFHRDFKLLPWPRASEGYRHLQEYL TLPEKFLFFEVRGLDAAAGLKEDRFEIAFHLERPPPLDARIHREMFRLHCAPVVNLFSVPADPILHRTLDREHLLRASDL PPNHAEIYSVDSVTGLKAGRNERRVYRPFYEFTHTAGGDAEQSFYRLRRAPSPLDEGIDTYITLETPRNIAPEVNAEEAL SMDLTCTNRSLPSRLQVGDLTASTSASPTQAKFKNISPVSRPARAPLGTELHWRLLSHLAINQHSLADAAALRRLMDLYN FHSLTDNLAARASRLRINAIRAVETKPVTRFLEGAPLRGHRTRVDLDEENFMGVGDSFLFGSVLEELLASHVTINSFNEL SIRLHPSQTEFAWLPRNGSQTLL
Specific function: Unknown
COG id: COG3519
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65457; Mature: 65457
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKYYLSELSYLREMGRAFGLANPSVAGLLVERGADPDVERLLEGFAFLAARIRERVDD CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC DVPELVHGLTELLLPHYLRPLPASTIVEFTPHLRALRGRSRLAAGAEVASQPIDGTSCVF CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCHHHHCCCCCCCCEEE RTTTDVDLLPVQLTDALLDRSSITAPVLRLYFQTTEQGRAEVLREQGLRLFIHADLSAAS EECCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCHHHH VVLLWLLRYCRQVRVRGASGQGDGIKLPVNAIQPVGFHRDFKLLPWPRASEGYRHLQEYL HHHHHHHHHHHHHHCCCCCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH TLPEKFLFFEVRGLDAAAGLKEDRFEIAFHLERPPPLDARIHREMFRLHCAPVVNLFSVP CCCCCEEEEEEECCCHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC ADPILHRTLDREHLLRASDLPPNHAEIYSVDSVTGLKAGRNERRVYRPFYEFTHTAGGDA CCHHHHHHCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCH EQSFYRLRRAPSPLDEGIDTYITLETPRNIAPEVNAEEALSMDLTCTNRSLPSRLQVGDL HHHHHHHHCCCCCHHCCCCEEEEEECCCCCCCCCCHHHHHEEEEEECCCCCCCCCEECCC TASTSASPTQAKFKNISPVSRPARAPLGTELHWRLLSHLAINQHSLADAAALRRLMDLYN CCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FHSLTDNLAARASRLRINAIRAVETKPVTRFLEGAPLRGHRTRVDLDEENFMGVGDSFLF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHHH GSVLEELLASHVTINSFNELSIRLHPSQTEFAWLPRNGSQTLL HHHHHHHHHHHCEECCCCEEEEEECCCCCCEEEECCCCCCCCC >Mature Secondary Structure MFSKYYLSELSYLREMGRAFGLANPSVAGLLVERGADPDVERLLEGFAFLAARIRERVDD CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC DVPELVHGLTELLLPHYLRPLPASTIVEFTPHLRALRGRSRLAAGAEVASQPIDGTSCVF CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHCHHHHCCCCCCCCEEE RTTTDVDLLPVQLTDALLDRSSITAPVLRLYFQTTEQGRAEVLREQGLRLFIHADLSAAS EECCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCHHHH VVLLWLLRYCRQVRVRGASGQGDGIKLPVNAIQPVGFHRDFKLLPWPRASEGYRHLQEYL HHHHHHHHHHHHHHCCCCCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH TLPEKFLFFEVRGLDAAAGLKEDRFEIAFHLERPPPLDARIHREMFRLHCAPVVNLFSVP CCCCCEEEEEEECCCHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC ADPILHRTLDREHLLRASDLPPNHAEIYSVDSVTGLKAGRNERRVYRPFYEFTHTAGGDA CCHHHHHHCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCH EQSFYRLRRAPSPLDEGIDTYITLETPRNIAPEVNAEEALSMDLTCTNRSLPSRLQVGDL HHHHHHHHCCCCCHHCCCCEEEEEECCCCCCCCCCHHHHHEEEEEECCCCCCCCCEECCC TASTSASPTQAKFKNISPVSRPARAPLGTELHWRLLSHLAINQHSLADAAALRRLMDLYN CCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FHSLTDNLAARASRLRINAIRAVETKPVTRFLEGAPLRGHRTRVDLDEENFMGVGDSFLF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHHH GSVLEELLASHVTINSFNELSIRLHPSQTEFAWLPRNGSQTLL HHHHHHHHHHHCEECCCCEEEEEECCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA