Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is 108762865

Identifier: 108762865

GI number: 108762865

Start: 47274

End: 49139

Strand: Direct

Name: 108762865

Synonym: MXAN_0041

Alternate gene names: NA

Gene position: 47274-49139 (Clockwise)

Preceding gene: 108760728

Following gene: 108760785

Centisome position: 0.52

GC content: 67.9

Gene sequence:

>1866_bases
ATGGCAACGGGAAGCGGCGGTGCCTCGGTGACGGGACAGCCGGTGGCCATCGAGGACCACGGCGTCATCGGCGACCTGCG
GACGGTGGCGCTGGTGGGCCATGAGGGCACCATCGACTGGTTTTGTTTTCCGCACTTCGACAGTCCCAGTGTCTTCGCCG
CGCTGTTGGACCGTGAGAAGGGAGGCCACTGGGGCGTCGCGCCGGAACCCGACGGGGTGATGAAGCGGCAGTTCTACTGG
CCGGAGACCAACGTCCTGGTGACGCGCTTCTACACGCCGGATGGCGTGGGCGAGCTGGTCGACTTCATGCCCATGTCGGG
CAGGAAGGGGATGAAGGAGGAGCGGGAAATCCTCCGGCGCGTGCGGGTGGTGCGCGGACAGATGGTCTTCCGCATGGAGT
GCTTCCCGGCCTTCAACTACGCGCGGGATACGCACGAGACGAAGCTCATCCACAGCGGGGCCACCTTCTCCTCCGACACG
CTCCAGCTCACGCTGTCCTCGTCGGTGTCGCTGAAGAAGACGGAGCGGGGCGTCACCGCGTCCTTCACCCTGCATGAGAA
CCAGTCCGCCGTCTTCTCCCTGCACCCGGGCGCGCGCACGTCCTGCGAGGCGGTGGTGCACAACCATGAGTCCTCCGAGG
AGCTCTTCCGGGAGACGGTGGAGTACTGGCGCCACTGGCTGTCGGGCTGCCAGTACACGGGCCGGTGGCGGGAGACGGTG
CAGCGCTCGGCGCTGGCGCTCAAGCTGATGACCTTCGCGCCCACGGGCGCCATCGTCGCGGCGCCCACTTGCAGCCTGCC
GGAGTCACCGGGCGGAACGCGCAACTGGGACTATCGCTTCTGCTGGCTGCGCGACGCGGCCTTCACCGTGTACGCGTTTC
TCCGCATCGGCTTCAAGCAGGAGGCGGCGGCCTTCATGCGCTGGGTGGAGGCGCGCTGCGCGGAGTACGACGAAGGGCCG
CTGCCCCTGATGTTCGGCATCGACGGCAAGCGCGTGCCCGAGGAGCAGGAACTCCTGCACCTGTCGGGCTATGGCGGCGC
GCGCCCGGTGCGCATCGGCAACGCGGCGGCGGACCAGTTGCAGCTCGACATCTACGGCGAGCTGATGGATTCGGTGTACC
TGTCCAACAAGTACGCGGCCCCTATCTCCTATGACTTCTGGCGGCACCTGCGGCGGCTGGTGGACTGGGTGTGTGACAAC
TGGGAGCTGCCAGACGAGGGCATCTGGGAGGTGAGGGGCGGGCAGCGGCAGTTCGTGTACTCGAAGCTGATGTGCTGGGT
GGCGGTGGACCGGGCCATCCGGCTGGCGGACAAGCGCAGCTTCCCGGCGGACCGGGCCCGCTGGCACAAGGTGCGGGACG
CCATCTTCGAGGACATCATGGACAAGGGCTGGAACCCGGAGCGGGGCGCCTTCGTCCAGTACTACGGCGGCCACGCGCTG
GACGCGGCGAATCTGCTGATGCCGCTGGTGTTCTTCCTGTCCCCGGTGGACCCGCGCATGCTCCAGACGTTGGACGTCAT
GCGCAAGCCGCCGTCCCAAGGCGGGCTCGCGTCGGACGGGCTGGTGTTCCGCTACGACGTGGAGGCCACGTTGGATGGGA
TTGCCGGCAGCGAGGGCACCTTCAACCTCTGCAGCTTCTGGCTGGTGGAGGCGATGACACGCGCCAGCGTGGCCCGGCCC
GACTTGCTGGAGGAGGCGCGGCTCATCTTCGAGCGGATGCTGGGCTACGCCAACCACGTGGGCCTGTACGCGGAGCAGAC
GGGCATGTCCGGCGAGGCCCTGGGCAACTTCCCGCAGGCGCTCACCCACCTGGCGCTCATCAGCTCCGCCTACAACCTGG
ACCGCACACTGGGCCGGCGCGACTGA

Upstream 100 bases:

>100_bases
GCACTCGCCCGAGGACTTCTGCGACGTCGTCACTGGCAAGAAGTCCGGCGGCATCAAGGACGTCATCCGCTTCATCTGAC
CCTTCGAAAAGGAGTGACGC

Downstream 100 bases:

>100_bases
GGCCGCGTCATTCGTCCTACACGCCCACGAATTCGGACCAGGCGCCTGGCGTCACCACGCCGGCCAGGCGGACGCTGAGG
TCATCCGGCCGCTGGACGAT

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase; Trehalose-Phosphatase; Six-Hairpin Glycosidase-Like Protein; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; HAD Family Hydrolase; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Glycosyl Hydrolase Family Protein; Glucoamylase-Related Protein Trehalase

Number of amino acids: Translated: 621; Mature: 620

Protein sequence:

>621_residues
MATGSGGASVTGQPVAIEDHGVIGDLRTVALVGHEGTIDWFCFPHFDSPSVFAALLDREKGGHWGVAPEPDGVMKRQFYW
PETNVLVTRFYTPDGVGELVDFMPMSGRKGMKEEREILRRVRVVRGQMVFRMECFPAFNYARDTHETKLIHSGATFSSDT
LQLTLSSSVSLKKTERGVTASFTLHENQSAVFSLHPGARTSCEAVVHNHESSEELFRETVEYWRHWLSGCQYTGRWRETV
QRSALALKLMTFAPTGAIVAAPTCSLPESPGGTRNWDYRFCWLRDAAFTVYAFLRIGFKQEAAAFMRWVEARCAEYDEGP
LPLMFGIDGKRVPEEQELLHLSGYGGARPVRIGNAAADQLQLDIYGELMDSVYLSNKYAAPISYDFWRHLRRLVDWVCDN
WELPDEGIWEVRGGQRQFVYSKLMCWVAVDRAIRLADKRSFPADRARWHKVRDAIFEDIMDKGWNPERGAFVQYYGGHAL
DAANLLMPLVFFLSPVDPRMLQTLDVMRKPPSQGGLASDGLVFRYDVEATLDGIAGSEGTFNLCSFWLVEAMTRASVARP
DLLEEARLIFERMLGYANHVGLYAEQTGMSGEALGNFPQALTHLALISSAYNLDRTLGRRD

Sequences:

>Translated_621_residues
MATGSGGASVTGQPVAIEDHGVIGDLRTVALVGHEGTIDWFCFPHFDSPSVFAALLDREKGGHWGVAPEPDGVMKRQFYW
PETNVLVTRFYTPDGVGELVDFMPMSGRKGMKEEREILRRVRVVRGQMVFRMECFPAFNYARDTHETKLIHSGATFSSDT
LQLTLSSSVSLKKTERGVTASFTLHENQSAVFSLHPGARTSCEAVVHNHESSEELFRETVEYWRHWLSGCQYTGRWRETV
QRSALALKLMTFAPTGAIVAAPTCSLPESPGGTRNWDYRFCWLRDAAFTVYAFLRIGFKQEAAAFMRWVEARCAEYDEGP
LPLMFGIDGKRVPEEQELLHLSGYGGARPVRIGNAAADQLQLDIYGELMDSVYLSNKYAAPISYDFWRHLRRLVDWVCDN
WELPDEGIWEVRGGQRQFVYSKLMCWVAVDRAIRLADKRSFPADRARWHKVRDAIFEDIMDKGWNPERGAFVQYYGGHAL
DAANLLMPLVFFLSPVDPRMLQTLDVMRKPPSQGGLASDGLVFRYDVEATLDGIAGSEGTFNLCSFWLVEAMTRASVARP
DLLEEARLIFERMLGYANHVGLYAEQTGMSGEALGNFPQALTHLALISSAYNLDRTLGRRD
>Mature_620_residues
ATGSGGASVTGQPVAIEDHGVIGDLRTVALVGHEGTIDWFCFPHFDSPSVFAALLDREKGGHWGVAPEPDGVMKRQFYWP
ETNVLVTRFYTPDGVGELVDFMPMSGRKGMKEEREILRRVRVVRGQMVFRMECFPAFNYARDTHETKLIHSGATFSSDTL
QLTLSSSVSLKKTERGVTASFTLHENQSAVFSLHPGARTSCEAVVHNHESSEELFRETVEYWRHWLSGCQYTGRWRETVQ
RSALALKLMTFAPTGAIVAAPTCSLPESPGGTRNWDYRFCWLRDAAFTVYAFLRIGFKQEAAAFMRWVEARCAEYDEGPL
PLMFGIDGKRVPEEQELLHLSGYGGARPVRIGNAAADQLQLDIYGELMDSVYLSNKYAAPISYDFWRHLRRLVDWVCDNW
ELPDEGIWEVRGGQRQFVYSKLMCWVAVDRAIRLADKRSFPADRARWHKVRDAIFEDIMDKGWNPERGAFVQYYGGHALD
AANLLMPLVFFLSPVDPRMLQTLDVMRKPPSQGGLASDGLVFRYDVEATLDGIAGSEGTFNLCSFWLVEAMTRASVARPD
LLEEARLIFERMLGYANHVGLYAEQTGMSGEALGNFPQALTHLALISSAYNLDRTLGRRD

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69912; Mature: 69781

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGSGGASVTGQPVAIEDHGVIGDLRTVALVGHEGTIDWFCFPHFDSPSVFAALLDREK
CCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCC
GGHWGVAPEPDGVMKRQFYWPETNVLVTRFYTPDGVGELVDFMPMSGRKGMKEEREILRR
CCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHH
VRVVRGQMVFRMECFPAFNYARDTHETKLIHSGATFSSDTLQLTLSSSVSLKKTERGVTA
HHHHHCCEEEEEECCCCCCHHCCCCHHEEEECCCCCCCCEEEEEECCCCEEEHHCCCCEE
SFTLHENQSAVFSLHPGARTSCEAVVHNHESSEELFRETVEYWRHWLSGCQYTGRWRETV
EEEEECCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QRSALALKLMTFAPTGAIVAAPTCSLPESPGGTRNWDYRFCWLRDAAFTVYAFLRIGFKQ
HHHHHHEEHEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCHH
EAAAFMRWVEARCAEYDEGPLPLMFGIDGKRVPEEQELLHLSGYGGARPVRIGNAAADQL
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHEEEEECCCCCCCEEECCCCCHHE
QLDIYGELMDSVYLSNKYAAPISYDFWRHLRRLVDWVCDNWELPDEGIWEVRGGQRQFVY
EHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHH
SKLMCWVAVDRAIRLADKRSFPADRARWHKVRDAIFEDIMDKGWNPERGAFVQYYGGHAL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHH
DAANLLMPLVFFLSPVDPRMLQTLDVMRKPPSQGGLASDGLVFRYDVEATLDGIAGSEGT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCC
FNLCSFWLVEAMTRASVARPDLLEEARLIFERMLGYANHVGLYAEQTGMSGEALGNFPQA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCHHHH
LTHLALISSAYNLDRTLGRRD
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ATGSGGASVTGQPVAIEDHGVIGDLRTVALVGHEGTIDWFCFPHFDSPSVFAALLDREK
CCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCC
GGHWGVAPEPDGVMKRQFYWPETNVLVTRFYTPDGVGELVDFMPMSGRKGMKEEREILRR
CCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHH
VRVVRGQMVFRMECFPAFNYARDTHETKLIHSGATFSSDTLQLTLSSSVSLKKTERGVTA
HHHHHCCEEEEEECCCCCCHHCCCCHHEEEECCCCCCCCEEEEEECCCCEEEHHCCCCEE
SFTLHENQSAVFSLHPGARTSCEAVVHNHESSEELFRETVEYWRHWLSGCQYTGRWRETV
EEEEECCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QRSALALKLMTFAPTGAIVAAPTCSLPESPGGTRNWDYRFCWLRDAAFTVYAFLRIGFKQ
HHHHHHEEHEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCHH
EAAAFMRWVEARCAEYDEGPLPLMFGIDGKRVPEEQELLHLSGYGGARPVRIGNAAADQL
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHEEEEECCCCCCCEEECCCCCHHE
QLDIYGELMDSVYLSNKYAAPISYDFWRHLRRLVDWVCDNWELPDEGIWEVRGGQRQFVY
EHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHH
SKLMCWVAVDRAIRLADKRSFPADRARWHKVRDAIFEDIMDKGWNPERGAFVQYYGGHAL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHH
DAANLLMPLVFFLSPVDPRMLQTLDVMRKPPSQGGLASDGLVFRYDVEATLDGIAGSEGT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCC
FNLCSFWLVEAMTRASVARPDLLEEARLIFERMLGYANHVGLYAEQTGMSGEALGNFPQA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCHHHH
LTHLALISSAYNLDRTLGRRD
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA