| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762865
Identifier: 108762865
GI number: 108762865
Start: 47274
End: 49139
Strand: Direct
Name: 108762865
Synonym: MXAN_0041
Alternate gene names: NA
Gene position: 47274-49139 (Clockwise)
Preceding gene: 108760728
Following gene: 108760785
Centisome position: 0.52
GC content: 67.9
Gene sequence:
>1866_bases ATGGCAACGGGAAGCGGCGGTGCCTCGGTGACGGGACAGCCGGTGGCCATCGAGGACCACGGCGTCATCGGCGACCTGCG GACGGTGGCGCTGGTGGGCCATGAGGGCACCATCGACTGGTTTTGTTTTCCGCACTTCGACAGTCCCAGTGTCTTCGCCG CGCTGTTGGACCGTGAGAAGGGAGGCCACTGGGGCGTCGCGCCGGAACCCGACGGGGTGATGAAGCGGCAGTTCTACTGG CCGGAGACCAACGTCCTGGTGACGCGCTTCTACACGCCGGATGGCGTGGGCGAGCTGGTCGACTTCATGCCCATGTCGGG CAGGAAGGGGATGAAGGAGGAGCGGGAAATCCTCCGGCGCGTGCGGGTGGTGCGCGGACAGATGGTCTTCCGCATGGAGT GCTTCCCGGCCTTCAACTACGCGCGGGATACGCACGAGACGAAGCTCATCCACAGCGGGGCCACCTTCTCCTCCGACACG CTCCAGCTCACGCTGTCCTCGTCGGTGTCGCTGAAGAAGACGGAGCGGGGCGTCACCGCGTCCTTCACCCTGCATGAGAA CCAGTCCGCCGTCTTCTCCCTGCACCCGGGCGCGCGCACGTCCTGCGAGGCGGTGGTGCACAACCATGAGTCCTCCGAGG AGCTCTTCCGGGAGACGGTGGAGTACTGGCGCCACTGGCTGTCGGGCTGCCAGTACACGGGCCGGTGGCGGGAGACGGTG CAGCGCTCGGCGCTGGCGCTCAAGCTGATGACCTTCGCGCCCACGGGCGCCATCGTCGCGGCGCCCACTTGCAGCCTGCC GGAGTCACCGGGCGGAACGCGCAACTGGGACTATCGCTTCTGCTGGCTGCGCGACGCGGCCTTCACCGTGTACGCGTTTC TCCGCATCGGCTTCAAGCAGGAGGCGGCGGCCTTCATGCGCTGGGTGGAGGCGCGCTGCGCGGAGTACGACGAAGGGCCG CTGCCCCTGATGTTCGGCATCGACGGCAAGCGCGTGCCCGAGGAGCAGGAACTCCTGCACCTGTCGGGCTATGGCGGCGC GCGCCCGGTGCGCATCGGCAACGCGGCGGCGGACCAGTTGCAGCTCGACATCTACGGCGAGCTGATGGATTCGGTGTACC TGTCCAACAAGTACGCGGCCCCTATCTCCTATGACTTCTGGCGGCACCTGCGGCGGCTGGTGGACTGGGTGTGTGACAAC TGGGAGCTGCCAGACGAGGGCATCTGGGAGGTGAGGGGCGGGCAGCGGCAGTTCGTGTACTCGAAGCTGATGTGCTGGGT GGCGGTGGACCGGGCCATCCGGCTGGCGGACAAGCGCAGCTTCCCGGCGGACCGGGCCCGCTGGCACAAGGTGCGGGACG CCATCTTCGAGGACATCATGGACAAGGGCTGGAACCCGGAGCGGGGCGCCTTCGTCCAGTACTACGGCGGCCACGCGCTG GACGCGGCGAATCTGCTGATGCCGCTGGTGTTCTTCCTGTCCCCGGTGGACCCGCGCATGCTCCAGACGTTGGACGTCAT GCGCAAGCCGCCGTCCCAAGGCGGGCTCGCGTCGGACGGGCTGGTGTTCCGCTACGACGTGGAGGCCACGTTGGATGGGA TTGCCGGCAGCGAGGGCACCTTCAACCTCTGCAGCTTCTGGCTGGTGGAGGCGATGACACGCGCCAGCGTGGCCCGGCCC GACTTGCTGGAGGAGGCGCGGCTCATCTTCGAGCGGATGCTGGGCTACGCCAACCACGTGGGCCTGTACGCGGAGCAGAC GGGCATGTCCGGCGAGGCCCTGGGCAACTTCCCGCAGGCGCTCACCCACCTGGCGCTCATCAGCTCCGCCTACAACCTGG ACCGCACACTGGGCCGGCGCGACTGA
Upstream 100 bases:
>100_bases GCACTCGCCCGAGGACTTCTGCGACGTCGTCACTGGCAAGAAGTCCGGCGGCATCAAGGACGTCATCCGCTTCATCTGAC CCTTCGAAAAGGAGTGACGC
Downstream 100 bases:
>100_bases GGCCGCGTCATTCGTCCTACACGCCCACGAATTCGGACCAGGCGCCTGGCGTCACCACGCCGGCCAGGCGGACGCTGAGG TCATCCGGCCGCTGGACGAT
Product: glycosy hydrolase family protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase; Trehalose-Phosphatase; Six-Hairpin Glycosidase-Like Protein; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; HAD Family Hydrolase; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Glycosyl Hydrolase Family Protein; Glucoamylase-Related Protein Trehalase
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MATGSGGASVTGQPVAIEDHGVIGDLRTVALVGHEGTIDWFCFPHFDSPSVFAALLDREKGGHWGVAPEPDGVMKRQFYW PETNVLVTRFYTPDGVGELVDFMPMSGRKGMKEEREILRRVRVVRGQMVFRMECFPAFNYARDTHETKLIHSGATFSSDT LQLTLSSSVSLKKTERGVTASFTLHENQSAVFSLHPGARTSCEAVVHNHESSEELFRETVEYWRHWLSGCQYTGRWRETV QRSALALKLMTFAPTGAIVAAPTCSLPESPGGTRNWDYRFCWLRDAAFTVYAFLRIGFKQEAAAFMRWVEARCAEYDEGP LPLMFGIDGKRVPEEQELLHLSGYGGARPVRIGNAAADQLQLDIYGELMDSVYLSNKYAAPISYDFWRHLRRLVDWVCDN WELPDEGIWEVRGGQRQFVYSKLMCWVAVDRAIRLADKRSFPADRARWHKVRDAIFEDIMDKGWNPERGAFVQYYGGHAL DAANLLMPLVFFLSPVDPRMLQTLDVMRKPPSQGGLASDGLVFRYDVEATLDGIAGSEGTFNLCSFWLVEAMTRASVARP DLLEEARLIFERMLGYANHVGLYAEQTGMSGEALGNFPQALTHLALISSAYNLDRTLGRRD
Sequences:
>Translated_621_residues MATGSGGASVTGQPVAIEDHGVIGDLRTVALVGHEGTIDWFCFPHFDSPSVFAALLDREKGGHWGVAPEPDGVMKRQFYW PETNVLVTRFYTPDGVGELVDFMPMSGRKGMKEEREILRRVRVVRGQMVFRMECFPAFNYARDTHETKLIHSGATFSSDT LQLTLSSSVSLKKTERGVTASFTLHENQSAVFSLHPGARTSCEAVVHNHESSEELFRETVEYWRHWLSGCQYTGRWRETV QRSALALKLMTFAPTGAIVAAPTCSLPESPGGTRNWDYRFCWLRDAAFTVYAFLRIGFKQEAAAFMRWVEARCAEYDEGP LPLMFGIDGKRVPEEQELLHLSGYGGARPVRIGNAAADQLQLDIYGELMDSVYLSNKYAAPISYDFWRHLRRLVDWVCDN WELPDEGIWEVRGGQRQFVYSKLMCWVAVDRAIRLADKRSFPADRARWHKVRDAIFEDIMDKGWNPERGAFVQYYGGHAL DAANLLMPLVFFLSPVDPRMLQTLDVMRKPPSQGGLASDGLVFRYDVEATLDGIAGSEGTFNLCSFWLVEAMTRASVARP DLLEEARLIFERMLGYANHVGLYAEQTGMSGEALGNFPQALTHLALISSAYNLDRTLGRRD >Mature_620_residues ATGSGGASVTGQPVAIEDHGVIGDLRTVALVGHEGTIDWFCFPHFDSPSVFAALLDREKGGHWGVAPEPDGVMKRQFYWP ETNVLVTRFYTPDGVGELVDFMPMSGRKGMKEEREILRRVRVVRGQMVFRMECFPAFNYARDTHETKLIHSGATFSSDTL QLTLSSSVSLKKTERGVTASFTLHENQSAVFSLHPGARTSCEAVVHNHESSEELFRETVEYWRHWLSGCQYTGRWRETVQ RSALALKLMTFAPTGAIVAAPTCSLPESPGGTRNWDYRFCWLRDAAFTVYAFLRIGFKQEAAAFMRWVEARCAEYDEGPL PLMFGIDGKRVPEEQELLHLSGYGGARPVRIGNAAADQLQLDIYGELMDSVYLSNKYAAPISYDFWRHLRRLVDWVCDNW ELPDEGIWEVRGGQRQFVYSKLMCWVAVDRAIRLADKRSFPADRARWHKVRDAIFEDIMDKGWNPERGAFVQYYGGHALD AANLLMPLVFFLSPVDPRMLQTLDVMRKPPSQGGLASDGLVFRYDVEATLDGIAGSEGTFNLCSFWLVEAMTRASVARPD LLEEARLIFERMLGYANHVGLYAEQTGMSGEALGNFPQALTHLALISSAYNLDRTLGRRD
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69912; Mature: 69781
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGSGGASVTGQPVAIEDHGVIGDLRTVALVGHEGTIDWFCFPHFDSPSVFAALLDREK CCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCC GGHWGVAPEPDGVMKRQFYWPETNVLVTRFYTPDGVGELVDFMPMSGRKGMKEEREILRR CCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHH VRVVRGQMVFRMECFPAFNYARDTHETKLIHSGATFSSDTLQLTLSSSVSLKKTERGVTA HHHHHCCEEEEEECCCCCCHHCCCCHHEEEECCCCCCCCEEEEEECCCCEEEHHCCCCEE SFTLHENQSAVFSLHPGARTSCEAVVHNHESSEELFRETVEYWRHWLSGCQYTGRWRETV EEEEECCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QRSALALKLMTFAPTGAIVAAPTCSLPESPGGTRNWDYRFCWLRDAAFTVYAFLRIGFKQ HHHHHHEEHEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCHH EAAAFMRWVEARCAEYDEGPLPLMFGIDGKRVPEEQELLHLSGYGGARPVRIGNAAADQL HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHEEEEECCCCCCCEEECCCCCHHE QLDIYGELMDSVYLSNKYAAPISYDFWRHLRRLVDWVCDNWELPDEGIWEVRGGQRQFVY EHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHH SKLMCWVAVDRAIRLADKRSFPADRARWHKVRDAIFEDIMDKGWNPERGAFVQYYGGHAL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHH DAANLLMPLVFFLSPVDPRMLQTLDVMRKPPSQGGLASDGLVFRYDVEATLDGIAGSEGT HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCC FNLCSFWLVEAMTRASVARPDLLEEARLIFERMLGYANHVGLYAEQTGMSGEALGNFPQA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCHHHH LTHLALISSAYNLDRTLGRRD HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ATGSGGASVTGQPVAIEDHGVIGDLRTVALVGHEGTIDWFCFPHFDSPSVFAALLDREK CCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCC GGHWGVAPEPDGVMKRQFYWPETNVLVTRFYTPDGVGELVDFMPMSGRKGMKEEREILRR CCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHH VRVVRGQMVFRMECFPAFNYARDTHETKLIHSGATFSSDTLQLTLSSSVSLKKTERGVTA HHHHHCCEEEEEECCCCCCHHCCCCHHEEEECCCCCCCCEEEEEECCCCEEEHHCCCCEE SFTLHENQSAVFSLHPGARTSCEAVVHNHESSEELFRETVEYWRHWLSGCQYTGRWRETV EEEEECCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QRSALALKLMTFAPTGAIVAAPTCSLPESPGGTRNWDYRFCWLRDAAFTVYAFLRIGFKQ HHHHHHEEHEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCHH EAAAFMRWVEARCAEYDEGPLPLMFGIDGKRVPEEQELLHLSGYGGARPVRIGNAAADQL HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHEEEEECCCCCCCEEECCCCCHHE QLDIYGELMDSVYLSNKYAAPISYDFWRHLRRLVDWVCDNWELPDEGIWEVRGGQRQFVY EHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHH SKLMCWVAVDRAIRLADKRSFPADRARWHKVRDAIFEDIMDKGWNPERGAFVQYYGGHAL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHH DAANLLMPLVFFLSPVDPRMLQTLDVMRKPPSQGGLASDGLVFRYDVEATLDGIAGSEGT HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCC FNLCSFWLVEAMTRASVARPDLLEEARLIFERMLGYANHVGLYAEQTGMSGEALGNFPQA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCHHHH LTHLALISSAYNLDRTLGRRD HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA