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The map label for this gene is yphC [C]

Identifier: 108760728

GI number: 108760728

Start: 46167

End: 47252

Strand: Direct

Name: yphC [C]

Synonym: MXAN_0040

Alternate gene names: 108760728

Gene position: 46167-47252 (Clockwise)

Preceding gene: 108758634

Following gene: 108762865

Centisome position: 0.51

GC content: 70.72

Gene sequence:

>1086_bases
ATGAAGGCCGTGGCCGTCTTCCCCCAGAAGCGCGAGGTGCGTGTCATCACCGACGCCCCCGAGCCCCGCATCCAGTCCCC
CACGCAGGTGAAGGTGCGGACGCGGGAAATCGGGGTGTGTGGCACGGACAAGGAAATCATCGAGTTCGTCTACGGCTCCC
CGCCGCCGGGCTCGGACCACCTCATCCTGGGCCACGAGTGTCTGGGCGAGGTGGTGGAGGTGGGCGAGGCCGTCCGGGGC
CTGAGCCGCGGGGACTGGGTGGTGCCCCGCGTGCGCCGGCCGTGCCCGCATGCCACCTGTCCGCCGTGCCGCGGGGGCCA
TCCGGACTTCTGCATCACCGGCGATTACACCGAGCGGGGAATCAAGGGCGCCCACGGCTTCGGCGCCGAGTCCTTCGTGG
AGGACGTGGCCTACCTGCACCGGGTGCCCGCGGAGCTGCGCGAGGTGGCGGTGCTCACCGAGCCGCTCACCATCGCGGAG
AAGGCCCTCCGCCAACTGGAGCGCTTCCAGGACCGGCTGCCCTGGAGGGCGGGCCCGGGCCGCGCGGTGGTGCTGGGTGC
GGGGCCGGTGGGGTTGCTGGGCGCCATGGCGCTGGCCCGCCGGGGTTATGCCACCACGGTGTATTCGCGCAGCCCCAAGC
CCAACGTGAAGGCCGAGGCATCGGAGGCGATGGGGGTGCCCTACATCTCCTCGAAGGAGGTGCGGCCAGAGGAGCTGGTC
CGCAGGGTCGGCGCCGCGGACGTCATCTACGAGGCCGCGGGCGTGGCGAAGGCGGCGCTGGAGACGCTGAAGGCGCTGGG
CCCCAACGGCGTCTGCATCCTCACGGGTGTGCCGTCGAAGGAGGAGCCCTTCGACGTGTCACCGGTGCTCAAGGACGTGG
TGCTGGGCAACCAGGTGCTGGTGGGCACGGTGAACGCGGCGGATGTCGACTTCGACATGGCGCTGGAGGACTTGCGGCAC
TTCCAGGCCCGCTGGCCCGGGGGGCTGGAGCGGCTCATCTGCGCCAGGCACTCGCCCGAGGACTTCTGCGACGTCGTCAC
TGGCAAGAAGTCCGGCGGCATCAAGGACGTCATCCGCTTCATCTGA

Upstream 100 bases:

>100_bases
CACGGGTCCGTGTCTGAGCGGGCAGCCGTACCTGGCAGGCATCACCGTGTCCTGGTCCGCGTCTGGCCGCATGCCGGGAC
GTGTATCGCAAGGAGCCCGT

Downstream 100 bases:

>100_bases
CCCTTCGAAAAGGAGTGACGCATGGCAACGGGAAGCGGCGGTGCCTCGGTGACGGGACAGCCGGTGGCCATCGAGGACCA
CGGCGTCATCGGCGACCTGC

Product: putative glucose 1-dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKAVAVFPQKREVRVITDAPEPRIQSPTQVKVRTREIGVCGTDKEIIEFVYGSPPPGSDHLILGHECLGEVVEVGEAVRG
LSRGDWVVPRVRRPCPHATCPPCRGGHPDFCITGDYTERGIKGAHGFGAESFVEDVAYLHRVPAELREVAVLTEPLTIAE
KALRQLERFQDRLPWRAGPGRAVVLGAGPVGLLGAMALARRGYATTVYSRSPKPNVKAEASEAMGVPYISSKEVRPEELV
RRVGAADVIYEAAGVAKAALETLKALGPNGVCILTGVPSKEEPFDVSPVLKDVVLGNQVLVGTVNAADVDFDMALEDLRH
FQARWPGGLERLICARHSPEDFCDVVTGKKSGGIKDVIRFI

Sequences:

>Translated_361_residues
MKAVAVFPQKREVRVITDAPEPRIQSPTQVKVRTREIGVCGTDKEIIEFVYGSPPPGSDHLILGHECLGEVVEVGEAVRG
LSRGDWVVPRVRRPCPHATCPPCRGGHPDFCITGDYTERGIKGAHGFGAESFVEDVAYLHRVPAELREVAVLTEPLTIAE
KALRQLERFQDRLPWRAGPGRAVVLGAGPVGLLGAMALARRGYATTVYSRSPKPNVKAEASEAMGVPYISSKEVRPEELV
RRVGAADVIYEAAGVAKAALETLKALGPNGVCILTGVPSKEEPFDVSPVLKDVVLGNQVLVGTVNAADVDFDMALEDLRH
FQARWPGGLERLICARHSPEDFCDVVTGKKSGGIKDVIRFI
>Mature_361_residues
MKAVAVFPQKREVRVITDAPEPRIQSPTQVKVRTREIGVCGTDKEIIEFVYGSPPPGSDHLILGHECLGEVVEVGEAVRG
LSRGDWVVPRVRRPCPHATCPPCRGGHPDFCITGDYTERGIKGAHGFGAESFVEDVAYLHRVPAELREVAVLTEPLTIAE
KALRQLERFQDRLPWRAGPGRAVVLGAGPVGLLGAMALARRGYATTVYSRSPKPNVKAEASEAMGVPYISSKEVRPEELV
RRVGAADVIYEAAGVAKAALETLKALGPNGVCILTGVPSKEEPFDVSPVLKDVVLGNQVLVGTVNAADVDFDMALEDLRH
FQARWPGGLERLICARHSPEDFCDVVTGKKSGGIKDVIRFI

Specific function: Unknown

COG id: COG1063

COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082125, Length=363, Percent_Identity=26.4462809917355, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562876, Length=259, Percent_Identity=28.1853281853282, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17562878, Length=190, Percent_Identity=28.9473684210526, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6319258, Length=383, Percent_Identity=26.1096605744125, Blast_Score=86, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6319257, Length=349, Percent_Identity=26.9340974212034, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N [H]

EC number: =1.1.1.47 [H]

Molecular weight: Translated: 39018; Mature: 39018

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS00059 ADH_ZINC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVAVFPQKREVRVITDAPEPRIQSPTQVKVRTREIGVCGTDKEIIEFVYGSPPPGSDH
CCCEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCC
LILGHECLGEVVEVGEAVRGLSRGDWVVPRVRRPCPHATCPPCRGGHPDFCITGDYTERG
EEECHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHC
IKGAHGFGAESFVEDVAYLHRVPAELREVAVLTEPLTIAEKALRQLERFQDRLPWRAGPG
CCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
RAVVLGAGPVGLLGAMALARRGYATTVYSRSPKPNVKAEASEAMGVPYISSKEVRPEELV
CEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHH
RRVGAADVIYEAAGVAKAALETLKALGPNGVCILTGVPSKEEPFDVSPVLKDVVLGNQVL
HHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEE
VGTVNAADVDFDMALEDLRHFQARWPGGLERLICARHSPEDFCDVVTGKKSGGIKDVIRF
EEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH
I
C
>Mature Secondary Structure
MKAVAVFPQKREVRVITDAPEPRIQSPTQVKVRTREIGVCGTDKEIIEFVYGSPPPGSDH
CCCEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCC
LILGHECLGEVVEVGEAVRGLSRGDWVVPRVRRPCPHATCPPCRGGHPDFCITGDYTERG
EEECHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHC
IKGAHGFGAESFVEDVAYLHRVPAELREVAVLTEPLTIAEKALRQLERFQDRLPWRAGPG
CCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
RAVVLGAGPVGLLGAMALARRGYATTVYSRSPKPNVKAEASEAMGVPYISSKEVRPEELV
CEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHH
RRVGAADVIYEAAGVAKAALETLKALGPNGVCILTGVPSKEEPFDVSPVLKDVVLGNQVL
HHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEE
VGTVNAADVDFDMALEDLRHFQARWPGGLERLICARHSPEDFCDVVTGKKSGGIKDVIRF
EEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8436115; 11029001; 2803257 [H]