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The map label for this gene is pqqE [H]

Identifier: 108761742

GI number: 108761742

Start: 4026869

End: 4027951

Strand: Reverse

Name: pqqE [H]

Synonym: MXAN_3456

Alternate gene names: 108761742

Gene position: 4027951-4026869 (Counterclockwise)

Preceding gene: 108763716

Following gene: 108756974

Centisome position: 44.07

GC content: 70.73

Gene sequence:

>1083_bases
ATGGATGGCCGGCTCGCGGCGGCCCGCATCGACCGGGCGCCCCCACCCGACCACCTGCTGGGCCCGCTCGCCGTCCACCT
GGAGGTCATTGGCGCGTGCAACCTCACGTGCACGCACTGCTTCGCGGGGGAGCTGCCGCGCAATCAGTCCCCGCTCTCCG
TGAAGGAGATGGACGCGCTCTTCGCGCAGCTCGCCGGATTGGGCAGCTTCCGGCTGGGACTCACCGGCGGTGAGCCGCTG
ATGCGCAAGGACCTGCTGGACATCCTCGACGCGGCGACGGGCCACGGCCTCCATCCCTGCATCACCACCAACGCGCTGCT
CATCGACGAACGGTGGGCGCGTGAGCTCGGCAAGCGCGAGCTGGTGTGGCTGAACGTGTCGCTGGAAGGCGCCCAGGCGG
GGACGAACGATGCCGTGCGGGGCGCTGGCGTCTTCGACCGGGTGATGGAGAAGCTCGCGCTACTCGGCCAGCATGCGCGC
TTCACCCTCGCCTTCACGCTGACGCGCGACAACGTGGCGGAAGTCGAGGCCTGCGTCGAACTGGCCCGGCGGGTGGGCGC
GCACACCGCCGTCTTCCGCCCGCTGTACCCCGTCGGCACCGCCACCCGGCACCCAGAGCTGATGCCCACGTTCGACGGCT
ACGTGGACGCACTCGCGCGGCTGGAGCGCGTCGAAGCCGACTCGGACCTCTTCGCGTTGGACCCCTTCAGTCCTTCGGCG
CGCGAGGAGCTGCGCGGCGTCGTGACGGAGGGCCCGGGCTGCGGAGCCGCGAACACGGTGGCCTCCGTCTCCGTCCAGGG
CAACGTGAATCCGTGCAGCTTCCTGGGCCGGGCCTTCGAGTCCGGCAACATCCGAACGCGCCCCTTCGAGGACATCTGGC
GTGACGGGCAGTCCTTCCAGCGCCTCCGGGCGAAGCAGACGGGAGACCGCTTCACCGGGGGCTGCCGCGCGCGTGCGCAG
TTCTACAATGGCTCCGCGTTCGCGGAGGACCCTTGGCAAGCCCAGTCCCTGGGAGCTGCCACGGAGTCACATCCACTGCC
CGTGCTCGGCGCGGAGCGGGGACAGGGGGGCGCATGTCGGTAA

Upstream 100 bases:

>100_bases
CGAGCACACCGCGGACGACGTCATCGGTGATGCGGAGGCTGGCGACCGGGACGCCGTCATCGGGCTCATCCAGCACCTGT
CGACGAAGGGCTACCTCCGG

Downstream 100 bases:

>100_bases
TCCAAGCCGCGCTGGGGAAAGCCCGGGTCCAGCGTGCCAGTGGGGACCTGGAAGGCGCCGCCGCGACGCTGGATGCGGTG
GCCTGGCAGGCACGCGAGGA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MDGRLAAARIDRAPPPDHLLGPLAVHLEVIGACNLTCTHCFAGELPRNQSPLSVKEMDALFAQLAGLGSFRLGLTGGEPL
MRKDLLDILDAATGHGLHPCITTNALLIDERWARELGKRELVWLNVSLEGAQAGTNDAVRGAGVFDRVMEKLALLGQHAR
FTLAFTLTRDNVAEVEACVELARRVGAHTAVFRPLYPVGTATRHPELMPTFDGYVDALARLERVEADSDLFALDPFSPSA
REELRGVVTEGPGCGAANTVASVSVQGNVNPCSFLGRAFESGNIRTRPFEDIWRDGQSFQRLRAKQTGDRFTGGCRARAQ
FYNGSAFAEDPWQAQSLGAATESHPLPVLGAERGQGGACR

Sequences:

>Translated_360_residues
MDGRLAAARIDRAPPPDHLLGPLAVHLEVIGACNLTCTHCFAGELPRNQSPLSVKEMDALFAQLAGLGSFRLGLTGGEPL
MRKDLLDILDAATGHGLHPCITTNALLIDERWARELGKRELVWLNVSLEGAQAGTNDAVRGAGVFDRVMEKLALLGQHAR
FTLAFTLTRDNVAEVEACVELARRVGAHTAVFRPLYPVGTATRHPELMPTFDGYVDALARLERVEADSDLFALDPFSPSA
REELRGVVTEGPGCGAANTVASVSVQGNVNPCSFLGRAFESGNIRTRPFEDIWRDGQSFQRLRAKQTGDRFTGGCRARAQ
FYNGSAFAEDPWQAQSLGAATESHPLPVLGAERGQGGACR
>Mature_360_residues
MDGRLAAARIDRAPPPDHLLGPLAVHLEVIGACNLTCTHCFAGELPRNQSPLSVKEMDALFAQLAGLGSFRLGLTGGEPL
MRKDLLDILDAATGHGLHPCITTNALLIDERWARELGKRELVWLNVSLEGAQAGTNDAVRGAGVFDRVMEKLALLGQHAR
FTLAFTLTRDNVAEVEACVELARRVGAHTAVFRPLYPVGTATRHPELMPTFDGYVDALARLERVEADSDLFALDPFSPSA
REELRGVVTEGPGCGAANTVASVSVQGNVNPCSFLGRAFESGNIRTRPFEDIWRDGQSFQRLRAKQTGDRFTGGCRARAQ
FYNGSAFAEDPWQAQSLGAATESHPLPVLGAERGQGGACR

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 38752; Mature: 38752

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGRLAAARIDRAPPPDHLLGPLAVHLEVIGACNLTCTHCFAGELPRNQSPLSVKEMDAL
CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCCCCHHHHHHH
FAQLAGLGSFRLGLTGGEPLMRKDLLDILDAATGHGLHPCITTNALLIDERWARELGKRE
HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCEEEECHHHHHHCCCCE
LVWLNVSLEGAQAGTNDAVRGAGVFDRVMEKLALLGQHARFTLAFTLTRDNVAEVEACVE
EEEEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHH
LARRVGAHTAVFRPLYPVGTATRHPELMPTFDGYVDALARLERVEADSDLFALDPFSPSA
HHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHH
REELRGVVTEGPGCGAANTVASVSVQGNVNPCSFLGRAFESGNIRTRPFEDIWRDGQSFQ
HHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHCCCHHHH
RLRAKQTGDRFTGGCRARAQFYNGSAFAEDPWQAQSLGAATESHPLPVLGAERGQGGACR
HHHHHHCCCCCCCCHHHEEEEECCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MDGRLAAARIDRAPPPDHLLGPLAVHLEVIGACNLTCTHCFAGELPRNQSPLSVKEMDAL
CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCCCCHHHHHHH
FAQLAGLGSFRLGLTGGEPLMRKDLLDILDAATGHGLHPCITTNALLIDERWARELGKRE
HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCEEEECHHHHHHCCCCE
LVWLNVSLEGAQAGTNDAVRGAGVFDRVMEKLALLGQHARFTLAFTLTRDNVAEVEACVE
EEEEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHH
LARRVGAHTAVFRPLYPVGTATRHPELMPTFDGYVDALARLERVEADSDLFALDPFSPSA
HHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHH
REELRGVVTEGPGCGAANTVASVSVQGNVNPCSFLGRAFESGNIRTRPFEDIWRDGQSFQ
HHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHCCCHHHH
RLRAKQTGDRFTGGCRARAQFYNGSAFAEDPWQAQSLGAATESHPLPVLGAERGQGGACR
HHHHHHCCCCCCCCHHHEEEEECCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]