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The map label for this gene is yciM [C]

Identifier: 108761603

GI number: 108761603

Start: 1548574

End: 1550493

Strand: Reverse

Name: yciM [C]

Synonym: MXAN_1324

Alternate gene names: 108761603

Gene position: 1550493-1548574 (Counterclockwise)

Preceding gene: 108760912

Following gene: 108756774

Centisome position: 16.96

GC content: 70.21

Gene sequence:

>1920_bases
ATGAAGACTGCCAGCTTCCTGGTGCTCCAGCTCCTCACCGCGCAGGCCGCCGAGCCCGACTCGGCCACGCTCGAGCGCAC
CGCCGCCGTGGAGAGCGCGCGGTTGGCCGAGTCCCCCGACGACGCGGATGCCCTGTACCGCCTGGGCACCGCCTTCCTCG
CGCTCAACACGCCGAAGAAGGCCGTGGCGCCCCTGAAGAAGCTGGTGGCCCAGGAGCCGGACCTCATTCCACCGAAGCTG
GCCCTGGCCCGCGCGCTGCGGCTGTCCGGTGAGCCGGAGCAGGCGCGCACGGTGCTGGACACGGCCATCGCCGCCTTCCC
TGAGGAGTCCACGCTCCGGGCCGAGCGCGGCCTGCTGGCGCGCGTGCTGGACGAGCGCGACGTGGCCATCAGCCAGTACG
CGGTGGCGGTGGAGCTGGCCCCCCAGGACGCGGAGCTGCGCTTCAACCTGGGCGAGGCCCTGCAGCGCGCCAACCGCACG
GACGATGCCATCGAGGCCTACCGTGAGGCGCTGAAGCTGGACGCGAAGCTCAACGTGGCCCGCGTGAATCTGGGCAAGGC
CCTGGCGGAGAAGGGCCTCAACGGCGAGGCCAAGGAGACGCTGCGCGAGGCCACCCGGCAGAAGCTGGGTGACACCGAGG
CGCACTACAACCTCGGCGTGCTCCTCATGCGGGAGAACGACCTGGACGGCGCCATCGCCGAGTACCAGCGCACGCTCGCC
GCCGCCCCCAAGCACGCCAGCGCGCACAACAACATGGGCGTGGCGTTCAACGAGAAGGGTGACCCGCGCAAGGCCACCGA
CGCCTTCCTCAAGGCCATCGCCGCGGACCCGAAGTTCGCCGAGGCGCACTTCAACCTGGGGTTGGCGTACTACCAGCTCG
GTGACTTCGCCCGGGCCACGAAGGCGTTCGAAAGGGCCGTGGTGCTGGAGCCGCAGCGGTCCAGCGGGCCGTACACGCAG
CTGGGCCACCTGTACCTGACGCAGGGCAAGAAGAAGCAGGCCGTCGAGGCCTTCAAGACGGCCATCGCGAAGAGCGCCGA
GGACGGGAAGAAGACGACGGAGGCGTACCAGGGCCTTGCTCGCGCGTGGCTCAGCCTGGGCAAGGCGGACGAAGCGGTGG
CCACCCTGAAGACGGCCGTGGGCGCCTTCCCGAAGGACGCGAGCGCCCGCGCCGCCTATGGCGAGGCCCTGCGCGCCAAG
GGTGACTTGGATGGCGCCATCGCCGAGTACGAAGAGGGTGTGAAGCTCGCCCCCACGCCGGAGAACCGGCTGGCGCTCGC
GGATGTGTACGCGCAGAAGCGGGTGGGCGCGAAAGCACAACCGCTCTACAAGGCCCTCCTGGACGAGGACCCCGCCAATC
GCGCCGCGAAGCTGGCGCTCGCGGACCTGCTGCTGGCCATGGGCGACTATGTGGCGGCGGAGGGGCTGCTCAAGCCCAAG
GACGGCGAAGAGGCCGACACCGCGGCGCTGGCGCGGCTGGGCATCGTCCACTCGCGGCGTGGTCGGCCGGACTTGGCCGT
GTCGGAGCTCGAGGCGGTGGTGGCGAAGGATCCTGCGCAGTTGGAGGCTCGCGCGGAGCTGGGCTTCATCTACCTGCGTG
GCGGCGACGGCGCGAAGGCGAGGAAGGTGCTGACGTCCGTGCTGTCGGTGGACCCGCGCCACTCGCTGGGCCTGCTGTAC
ATGGGCCACACGCTGTACCAGCAGGGCAACACGAAGGGCGCGGAGAAGTCCTTCCGCAACGCCGTGCAGGCAGACCCGAA
CTTCGCCGAGCCGCACAACGCACTCGGGCAACTGCTGGAAGCGACGAAGCGCATCGACGAGGCAAAGGACGCCTACAAGA
TGGCCGTGCAGTTGCAGCCGGACCACCCGGATGCGAAGGACGCACTGAAGCGGCTGACGGCGTCCGCGCCCACGCCGTAG

Upstream 100 bases:

>100_bases
AGGAAGAGAAGACGGCGCGGGAGGCGTGGGAGGCGAAGAAGGCGGCGCTCGCGAAGAAGACCTTCGACGCGCGCGCGAGT
CCCTACGTGGAGAACCTATA

Downstream 100 bases:

>100_bases
GCCGCTCGCGGAACGTCTCGCCGCAATGCATGCGGCGAGATGGGCGGAGGGTGTGCACGCCCACGCCCTAGGCGTCTCGC
GGGACGTCTCACGGCAAGGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MKTASFLVLQLLTAQAAEPDSATLERTAAVESARLAESPDDADALYRLGTAFLALNTPKKAVAPLKKLVAQEPDLIPPKL
ALARALRLSGEPEQARTVLDTAIAAFPEESTLRAERGLLARVLDERDVAISQYAVAVELAPQDAELRFNLGEALQRANRT
DDAIEAYREALKLDAKLNVARVNLGKALAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAIAEYQRTLA
AAPKHASAHNNMGVAFNEKGDPRKATDAFLKAIAADPKFAEAHFNLGLAYYQLGDFARATKAFERAVVLEPQRSSGPYTQ
LGHLYLTQGKKKQAVEAFKTAIAKSAEDGKKTTEAYQGLARAWLSLGKADEAVATLKTAVGAFPKDASARAAYGEALRAK
GDLDGAIAEYEEGVKLAPTPENRLALADVYAQKRVGAKAQPLYKALLDEDPANRAAKLALADLLLAMGDYVAAEGLLKPK
DGEEADTAALARLGIVHSRRGRPDLAVSELEAVVAKDPAQLEARAELGFIYLRGGDGAKARKVLTSVLSVDPRHSLGLLY
MGHTLYQQGNTKGAEKSFRNAVQADPNFAEPHNALGQLLEATKRIDEAKDAYKMAVQLQPDHPDAKDALKRLTASAPTP

Sequences:

>Translated_639_residues
MKTASFLVLQLLTAQAAEPDSATLERTAAVESARLAESPDDADALYRLGTAFLALNTPKKAVAPLKKLVAQEPDLIPPKL
ALARALRLSGEPEQARTVLDTAIAAFPEESTLRAERGLLARVLDERDVAISQYAVAVELAPQDAELRFNLGEALQRANRT
DDAIEAYREALKLDAKLNVARVNLGKALAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAIAEYQRTLA
AAPKHASAHNNMGVAFNEKGDPRKATDAFLKAIAADPKFAEAHFNLGLAYYQLGDFARATKAFERAVVLEPQRSSGPYTQ
LGHLYLTQGKKKQAVEAFKTAIAKSAEDGKKTTEAYQGLARAWLSLGKADEAVATLKTAVGAFPKDASARAAYGEALRAK
GDLDGAIAEYEEGVKLAPTPENRLALADVYAQKRVGAKAQPLYKALLDEDPANRAAKLALADLLLAMGDYVAAEGLLKPK
DGEEADTAALARLGIVHSRRGRPDLAVSELEAVVAKDPAQLEARAELGFIYLRGGDGAKARKVLTSVLSVDPRHSLGLLY
MGHTLYQQGNTKGAEKSFRNAVQADPNFAEPHNALGQLLEATKRIDEAKDAYKMAVQLQPDHPDAKDALKRLTASAPTP
>Mature_639_residues
MKTASFLVLQLLTAQAAEPDSATLERTAAVESARLAESPDDADALYRLGTAFLALNTPKKAVAPLKKLVAQEPDLIPPKL
ALARALRLSGEPEQARTVLDTAIAAFPEESTLRAERGLLARVLDERDVAISQYAVAVELAPQDAELRFNLGEALQRANRT
DDAIEAYREALKLDAKLNVARVNLGKALAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAIAEYQRTLA
AAPKHASAHNNMGVAFNEKGDPRKATDAFLKAIAADPKFAEAHFNLGLAYYQLGDFARATKAFERAVVLEPQRSSGPYTQ
LGHLYLTQGKKKQAVEAFKTAIAKSAEDGKKTTEAYQGLARAWLSLGKADEAVATLKTAVGAFPKDASARAAYGEALRAK
GDLDGAIAEYEEGVKLAPTPENRLALADVYAQKRVGAKAQPLYKALLDEDPANRAAKLALADLLLAMGDYVAAEGLLKPK
DGEEADTAALARLGIVHSRRGRPDLAVSELEAVVAKDPAQLEARAELGFIYLRGGDGAKARKVLTSVLSVDPRHSLGLLY
MGHTLYQQGNTKGAEKSFRNAVQADPNFAEPHNALGQLLEATKRIDEAKDAYKMAVQLQPDHPDAKDALKRLTASAPTP

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307150, Length=475, Percent_Identity=24.8421052631579, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI32307148, Length=475, Percent_Identity=24.8421052631579, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI83415184, Length=444, Percent_Identity=24.0990990990991, Blast_Score=83, Evalue=9e-16,
Organism=Homo sapiens, GI301336134, Length=444, Percent_Identity=24.3243243243243, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI115532692, Length=436, Percent_Identity=26.1467889908257, Blast_Score=105, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI115532690, Length=436, Percent_Identity=26.1467889908257, Blast_Score=105, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI25147174, Length=258, Percent_Identity=22.093023255814, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6319589, Length=308, Percent_Identity=26.2987012987013, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI17647755, Length=395, Percent_Identity=24.8101265822785, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24585827, Length=395, Percent_Identity=24.8101265822785, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24585829, Length=395, Percent_Identity=24.8101265822785, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI161076610, Length=237, Percent_Identity=28.2700421940928, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19920486, Length=237, Percent_Identity=28.2700421940928, Blast_Score=71, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24647123, Length=253, Percent_Identity=24.901185770751, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 68610; Mature: 68610

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTASFLVLQLLTAQAAEPDSATLERTAAVESARLAESPDDADALYRLGTAFLALNTPKK
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCHH
AVAPLKKLVAQEPDLIPPKLALARALRLSGEPEQARTVLDTAIAAFPEESTLRAERGLLA
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RVLDERDVAISQYAVAVELAPQDAELRFNLGEALQRANRTDDAIEAYREALKLDAKLNVA
HHHHHCCHHHHHEEEEEEECCCCCCEEECHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEE
RVNLGKALAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAIAEYQRTLA
EEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
AAPKHASAHNNMGVAFNEKGDPRKATDAFLKAIAADPKFAEAHFNLGLAYYQLGDFARAT
CCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHH
KAFERAVVLEPQRSSGPYTQLGHLYLTQGKKKQAVEAFKTAIAKSAEDGKKTTEAYQGLA
HHHHHHEEECCCCCCCCCHHHCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RAWLSLGKADEAVATLKTAVGAFPKDASARAAYGEALRAKGDLDGAIAEYEEGVKLAPTP
HHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCC
ENRLALADVYAQKRVGAKAQPLYKALLDEDPANRAAKLALADLLLAMGDYVAAEGLLKPK
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DGEEADTAALARLGIVHSRRGRPDLAVSELEAVVAKDPAQLEARAELGFIYLRGGDGAKA
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHCCEEEEEEECCCCHHH
RKVLTSVLSVDPRHSLGLLYMGHTLYQQGNTKGAEKSFRNAVQADPNFAEPHNALGQLLE
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ATKRIDEAKDAYKMAVQLQPDHPDAKDALKRLTASAPTP
HHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTASFLVLQLLTAQAAEPDSATLERTAAVESARLAESPDDADALYRLGTAFLALNTPKK
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCHH
AVAPLKKLVAQEPDLIPPKLALARALRLSGEPEQARTVLDTAIAAFPEESTLRAERGLLA
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RVLDERDVAISQYAVAVELAPQDAELRFNLGEALQRANRTDDAIEAYREALKLDAKLNVA
HHHHHCCHHHHHEEEEEEECCCCCCEEECHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEE
RVNLGKALAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAIAEYQRTLA
EEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
AAPKHASAHNNMGVAFNEKGDPRKATDAFLKAIAADPKFAEAHFNLGLAYYQLGDFARAT
CCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHH
KAFERAVVLEPQRSSGPYTQLGHLYLTQGKKKQAVEAFKTAIAKSAEDGKKTTEAYQGLA
HHHHHHEEECCCCCCCCCHHHCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RAWLSLGKADEAVATLKTAVGAFPKDASARAAYGEALRAKGDLDGAIAEYEEGVKLAPTP
HHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCC
ENRLALADVYAQKRVGAKAQPLYKALLDEDPANRAAKLALADLLLAMGDYVAAEGLLKPK
CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DGEEADTAALARLGIVHSRRGRPDLAVSELEAVVAKDPAQLEARAELGFIYLRGGDGAKA
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHCCEEEEEEECCCCHHH
RKVLTSVLSVDPRHSLGLLYMGHTLYQQGNTKGAEKSFRNAVQADPNFAEPHNALGQLLE
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ATKRIDEAKDAYKMAVQLQPDHPDAKDALKRLTASAPTP
HHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]