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The map label for this gene is 108759641

Identifier: 108759641

GI number: 108759641

Start: 6935557

End: 6936606

Strand: Reverse

Name: 108759641

Synonym: MXAN_5582

Alternate gene names: NA

Gene position: 6936606-6935557 (Counterclockwise)

Preceding gene: 108759055

Following gene: 108758798

Centisome position: 75.89

GC content: 66.86

Gene sequence:

>1050_bases
ATGGGTATCTTCGACAGCATCAAGGGTGAGGCGAAGCGCAACTTCATCGCCCGGGCGGACTCGGCGAAGGGCGACATCAT
CTACAAGTATCCGGAGAACAACGTCCGGATGCTGACCCAGCTCACCGTCGATGCGGACGAGGTCGCCCTCTTCGTGAAGG
ACGGCAAGGTGGAGGGCAAGCTGGGGCCCGGCCGCCACTCGCTGGACACGAACAACATCCCGTTCCTGTCCCGCCTCATC
GAAGGCTTCACGGGTGGCAACCTCTTCATCTCCGAAATCTTCTTCGTCTCCACCCGGGAGTTCGCCGGCGTGAAGTTCGG
CGGCCCCATCGGTGACGTGCGCGACCCGGAGACGGGCCTGGGCATCGGCACCATGGTGTACGGCGACTTCTCCATCCGCG
TGACGGACCCGGAGCGCCTGGTGGTGGGCCTGGTGGGCATGGGCCGCACCGGCAACGACGAGCTGCTCGGCTGGTTCAAG
AACCAGGTGCTGAAGGTGACGCGCGACCGCATCGCGGAGCTGCTCGTCAAGAAGCGCTGGCCGCTGCTCGACGTGACGAG
CGGCGCGTACACCGAGGAGATCGAGACCGAGGTCATCTCCGGGCTCAAGCCCCACGTGGACGGCTACGGCCTCACCGTGG
TGCGGATGGGCAACTTCCACGTCTCCATCAAGGAGGAGGACGAGGCGACGCTGAAGAAGCTGGGCAAGGACGTGGCGTAC
TCGCGTCTGGCCGGTGGCTTCCAGCAGTACGCGCAGGGCCAGGCGATGCTCGGCGCGGCCGAGGGCATGGCCAAGGGCGG
TGGCGGCGGTGGTGGTGCGGGCAACGCGCTGGGCGGCATGGGCATGGGCATGGGCTTCGGCATGGCCCAGCAGTTCATGA
ACCAGCAGCAGCACCAGCAGCGGCCTCCGGAGCCCGCGCCCGCGGCGCCCCCGGCGGACACGCGCAGCCCCGCGCAGCGC
CTGAAGGAAATCAAGGAGCTGAAGGACGCAGGCGTCCTCAGTGACGAGGAGTACAATGCGAAGCGCGCGGAGCTGATGAA
GCTCCTGTAG

Upstream 100 bases:

>100_bases
CGCGCGCTTTCGTCCGGGATGCCATGCTCTTAAATAAAAGGGTTGGGGTGGCGGCGCGGGTTGACCGGCTGCCAACGCGG
CCACGGAGGCGCTGACGGCA

Downstream 100 bases:

>100_bases
TTCCCTTCGTGTACCCCTGCGGTACCCAGAGCCTCCGTCCGACACCGGGCGGGGGCTCTCGTGTTTTCCCTGACATGCAC
TGGGGCTGGATGGACCTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Virion Core Protein-Like Protein; Band 7 Protein; Antifreeze Protein; Transmembrane Protein

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MGIFDSIKGEAKRNFIARADSAKGDIIYKYPENNVRMLTQLTVDADEVALFVKDGKVEGKLGPGRHSLDTNNIPFLSRLI
EGFTGGNLFISEIFFVSTREFAGVKFGGPIGDVRDPETGLGIGTMVYGDFSIRVTDPERLVVGLVGMGRTGNDELLGWFK
NQVLKVTRDRIAELLVKKRWPLLDVTSGAYTEEIETEVISGLKPHVDGYGLTVVRMGNFHVSIKEEDEATLKKLGKDVAY
SRLAGGFQQYAQGQAMLGAAEGMAKGGGGGGGAGNALGGMGMGMGFGMAQQFMNQQQHQQRPPEPAPAAPPADTRSPAQR
LKEIKELKDAGVLSDEEYNAKRAELMKLL

Sequences:

>Translated_349_residues
MGIFDSIKGEAKRNFIARADSAKGDIIYKYPENNVRMLTQLTVDADEVALFVKDGKVEGKLGPGRHSLDTNNIPFLSRLI
EGFTGGNLFISEIFFVSTREFAGVKFGGPIGDVRDPETGLGIGTMVYGDFSIRVTDPERLVVGLVGMGRTGNDELLGWFK
NQVLKVTRDRIAELLVKKRWPLLDVTSGAYTEEIETEVISGLKPHVDGYGLTVVRMGNFHVSIKEEDEATLKKLGKDVAY
SRLAGGFQQYAQGQAMLGAAEGMAKGGGGGGGAGNALGGMGMGMGFGMAQQFMNQQQHQQRPPEPAPAAPPADTRSPAQR
LKEIKELKDAGVLSDEEYNAKRAELMKLL
>Mature_348_residues
GIFDSIKGEAKRNFIARADSAKGDIIYKYPENNVRMLTQLTVDADEVALFVKDGKVEGKLGPGRHSLDTNNIPFLSRLIE
GFTGGNLFISEIFFVSTREFAGVKFGGPIGDVRDPETGLGIGTMVYGDFSIRVTDPERLVVGLVGMGRTGNDELLGWFKN
QVLKVTRDRIAELLVKKRWPLLDVTSGAYTEEIETEVISGLKPHVDGYGLTVVRMGNFHVSIKEEDEATLKKLGKDVAYS
RLAGGFQQYAQGQAMLGAAEGMAKGGGGGGGAGNALGGMGMGMGFGMAQQFMNQQQHQQRPPEPAPAAPPADTRSPAQRL
KEIKELKDAGVLSDEEYNAKRAELMKLL

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37717; Mature: 37585

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFDSIKGEAKRNFIARADSAKGDIIYKYPENNVRMLTQLTVDADEVALFVKDGKVEGK
CCCCHHHCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEECHHHEEEEEECCEECCC
LGPGRHSLDTNNIPFLSRLIEGFTGGNLFISEIFFVSTREFAGVKFGGPIGDVRDPETGL
CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHCCHHHCCEECCCCCCCCCCCCCCC
GIGTMVYGDFSIRVTDPERLVVGLVGMGRTGNDELLGWFKNQVLKVTRDRIAELLVKKRW
CEEEEEEEEEEEEEECHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLLDVTSGAYTEEIETEVISGLKPHVDGYGLTVVRMGNFHVSIKEEDEATLKKLGKDVAY
CEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHH
SRLAGGFQQYAQGQAMLGAAEGMAKGGGGGGGAGNALGGMGMGMGFGMAQQFMNQQQHQQ
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHC
RPPEPAPAAPPADTRSPAQRLKEIKELKDAGVLSDEEYNAKRAELMKLL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
GIFDSIKGEAKRNFIARADSAKGDIIYKYPENNVRMLTQLTVDADEVALFVKDGKVEGK
CCCHHHCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEECHHHEEEEEECCEECCC
LGPGRHSLDTNNIPFLSRLIEGFTGGNLFISEIFFVSTREFAGVKFGGPIGDVRDPETGL
CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHCCHHHCCEECCCCCCCCCCCCCCC
GIGTMVYGDFSIRVTDPERLVVGLVGMGRTGNDELLGWFKNQVLKVTRDRIAELLVKKRW
CEEEEEEEEEEEEEECHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLLDVTSGAYTEEIETEVISGLKPHVDGYGLTVVRMGNFHVSIKEEDEATLKKLGKDVAY
CEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHH
SRLAGGFQQYAQGQAMLGAAEGMAKGGGGGGGAGNALGGMGMGMGFGMAQQFMNQQQHQQ
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHC
RPPEPAPAAPPADTRSPAQRLKEIKELKDAGVLSDEEYNAKRAELMKLL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA