| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759055
Identifier: 108759055
GI number: 108759055
Start: 6936809
End: 6937609
Strand: Reverse
Name: 108759055
Synonym: MXAN_5583
Alternate gene names: NA
Gene position: 6937609-6936809 (Counterclockwise)
Preceding gene: 108758599
Following gene: 108759641
Centisome position: 75.91
GC content: 68.54
Gene sequence:
>801_bases ATGGCGTTCCGTCCGAAGCGGGCCCTGGCGGTGTTCTGGAAGGACTTCCTGGACCTGCGAAAAAACGTGGGCCTGCTGGT GTCCATGATGGTGCTCCCGGCCGTCATGGTGCTGGTGCCCATTGGCGTGGTGTGGACGTACGTGCGCACGCCAGACCACG CGGACCTGCGCAGCGTGGCGCTCTTCTACGACCCCACGCTGCCGTTGGGCGCCAGCGCCGCGCGCTTCCTCATCGACAAG ACGCTCACCGACTGGTTCGGCATGTTCCTGGTGATGCCGGTGTTCGTGCCCATCCTCATCGCGTCCCAGAGCGTGGCGGG GGAGAAGGAGCGGCGCACGCTGGAGCCGCTCCTGGCCTCGCCCGTGACGGCGGCGGAGCTGGTGACGGGCAAGAGCCTGG CGGCGCTGGTGCCGTCCGTGGCGATTACGTGGACGGCCTTCGTCCTGTTCTGCGTGGGCGTGGACATCGTCGCGTGGCCG CTGGTGAAGATGCCGCTGATGCCCAACGCGCTGTGGACCTTCGGCGTGTTCGTCATCGCGCCCCTGTTCGCCTTCTTCGG CAACGGGGTGGCGGTGCTCATCTCCGCCCGGGTGAGCGAGGCGCGCATGGCCCAGCAGCTGTCCGCGCTGGTGGTGCTGC CCATCGTGGGCATGGTGGGTGGGCAGGTGGCGGGCGTGCTCAAGGCGGGCTTCGGCTACTACCTGCTCCAGGGCGCGGTA GTGCTGGTGCTGGACGCCCTCCTGCTGTGGGCCAGTATCCGCCTGTTGGACCGTGAGCGGCTGGTGAGTCGCTGGGGCTA G
Upstream 100 bases:
>100_bases CCTGGTGGGGGCGGGCGCGCGGGTGCACAGCGCGGTGCCCACCCAGCGTCCCCTGGAAGAGGTCTATCTGGAGCTGCTGC GCGAAGGGAGGGGGTAGCCC
Downstream 100 bases:
>100_bases CGCGGACGCCGGCCGTCGCTTTCCAGGGCATCCAGCCTGTCGAGCGGCTAGGCTTTCGCCAGTAAAACTGGCATGTTGCG AGCAGGTGTCGGTACGCGAG
Product: ABC transporter permease
Products: NA
Alternate protein names: ABC Transporter Permease; ABC Transporter; ABC Transporter Permease Protein; Permease; ABC-Type Transport System Permease Component; Abc Transporter Permease Protein; ABC Transporter Membrane-Spanning Subunit
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MAFRPKRALAVFWKDFLDLRKNVGLLVSMMVLPAVMVLVPIGVVWTYVRTPDHADLRSVALFYDPTLPLGASAARFLIDK TLTDWFGMFLVMPVFVPILIASQSVAGEKERRTLEPLLASPVTAAELVTGKSLAALVPSVAITWTAFVLFCVGVDIVAWP LVKMPLMPNALWTFGVFVIAPLFAFFGNGVAVLISARVSEARMAQQLSALVVLPIVGMVGGQVAGVLKAGFGYYLLQGAV VLVLDALLLWASIRLLDRERLVSRWG
Sequences:
>Translated_266_residues MAFRPKRALAVFWKDFLDLRKNVGLLVSMMVLPAVMVLVPIGVVWTYVRTPDHADLRSVALFYDPTLPLGASAARFLIDK TLTDWFGMFLVMPVFVPILIASQSVAGEKERRTLEPLLASPVTAAELVTGKSLAALVPSVAITWTAFVLFCVGVDIVAWP LVKMPLMPNALWTFGVFVIAPLFAFFGNGVAVLISARVSEARMAQQLSALVVLPIVGMVGGQVAGVLKAGFGYYLLQGAV VLVLDALLLWASIRLLDRERLVSRWG >Mature_265_residues AFRPKRALAVFWKDFLDLRKNVGLLVSMMVLPAVMVLVPIGVVWTYVRTPDHADLRSVALFYDPTLPLGASAARFLIDKT LTDWFGMFLVMPVFVPILIASQSVAGEKERRTLEPLLASPVTAAELVTGKSLAALVPSVAITWTAFVLFCVGVDIVAWPL VKMPLMPNALWTFGVFVIAPLFAFFGNGVAVLISARVSEARMAQQLSALVVLPIVGMVGGQVAGVLKAGFGYYLLQGAVV LVLDALLLWASIRLLDRERLVSRWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28925; Mature: 28794
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRPKRALAVFWKDFLDLRKNVGLLVSMMVLPAVMVLVPIGVVWTYVRTPDHADLRSVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LFYDPTLPLGASAARFLIDKTLTDWFGMFLVMPVFVPILIASQSVAGEKERRTLEPLLAS HEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PVTAAELVTGKSLAALVPSVAITWTAFVLFCVGVDIVAWPLVKMPLMPNALWTFGVFVIA CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH PLFAFFGNGVAVLISARVSEARMAQQLSALVVLPIVGMVGGQVAGVLKAGFGYYLLQGAV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVLDALLLWASIRLLDRERLVSRWG HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AFRPKRALAVFWKDFLDLRKNVGLLVSMMVLPAVMVLVPIGVVWTYVRTPDHADLRSVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LFYDPTLPLGASAARFLIDKTLTDWFGMFLVMPVFVPILIASQSVAGEKERRTLEPLLAS HEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PVTAAELVTGKSLAALVPSVAITWTAFVLFCVGVDIVAWPLVKMPLMPNALWTFGVFVIA CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH PLFAFFGNGVAVLISARVSEARMAQQLSALVVLPIVGMVGGQVAGVLKAGFGYYLLQGAV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVLDALLLWASIRLLDRERLVSRWG HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA