| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is zraS [H]
Identifier: 108759565
GI number: 108759565
Start: 4580501
End: 4581856
Strand: Reverse
Name: zraS [H]
Synonym: MXAN_3812
Alternate gene names: 108759565
Gene position: 4581856-4580501 (Counterclockwise)
Preceding gene: 108758822
Following gene: 108763029
Centisome position: 50.13
GC content: 68.88
Gene sequence:
>1356_bases GTGAGCGGGAGAGGCCCCATGGACTCGCGGACCCAGCGCTACTTCGAGGACATCCAGCTCAAGCACTTCGGGCGCCTCTT CGGCCGGCTCGTTCGTGTCCGCCTGTTCCTGTCGCTATTGCTGCTGCTGTCCGCCGTGTGTGTCGCCGTCATCGACGGCG CGCCCTGGCGATGCGTGTTCATGAGCGTGGTGGGGGTGGGCGCCTTTACCTACTTCTTCCATGAGTTCCGCCGCTTTCAG CGCGACGGCGTTGACGCGCGCAGCGTGCCGCTCAATCTGTGGATGGGGCAGATCATCCTGACGAGCATCATCGTGGGGAC AGGCGGCATCGCCAGCCCCGTGCTGCCCGCCGCGCTGCCCCTGGGCTTCTTGTCGAGCCTCGCGGCGACGCCCCGGGATC GCTCGCGGCTGTTGATGGCGCAGTTGTCCACGCTGATGGCCGTCTCCTTCTTCCAGATTTCCGGGCTGGTTCAGGGGCTG CCCCTGTGGTTCCTCGGCGCGCCGTCGGCCGTCCTGCTCGTCGCGGGCGCCCTCGTCACCGCCATCATGCTCTGCGTGTG CAGCGCCGCGGGCGGCGCCATCCGGACGACCTTCGACAACATGCTGAGCGAGGCGCTCGCCAGCCGCGACGAACTGCTGG CCACGCATCGCTCGTATGCGGGCGCCCTGGAGGCCATGTCCGGAGAGATTGCCCACGAGCTGAAGAACCCGCTGGCCACG GTGAAGGGCCTCACCCAGCTCATGGCACGCGAAGCAGGTCGCGCCCAGCCCGCCGAACGCCTGCAGGTGCTGTCGGGCGA GGTGGTGCGGATGCAGGGCATCCTGGAGGAGTTCCTCAACTTCACTCGGCCGCTGGTGCCTTTGACGGTGAGCCCCGTGG ACCTGGGCGCGTTGTGCGACGAAGCCCTGGTGCTGCACGAAGGACTGGCGGCGGGCCACGGCGTGCGGCTGGAGCGCAAG GGCACGGAGGGCGTGGAGGCGGTGTGTGACTCGCGCAAGGTGAAGCAGGTGTTGATGAACCTGCTGCACAACGCCATCGA GGCCTGTCCCACGGGCGGGCGTGTCACCGTGGAGGTCCGCGCGCTGCCCGTGGGCGAGGCCCGCGTCTTCGTGCGCGACT CAGGGCCTGGACTGGCCTCCGATCTCGAGGCCCGTGTGTTCGACGCGGGCGTGACGACCAAGGCCAAGGGCTCCGGGTTG GGCCTGACGGTGGCGCGAGCCCTGGCGCGACAGCACGGCGGAGACGTCACGCTGGCGAATGCGGTAGGAGGCGGATGCGA GGCGGCGTTGACGCTTCCGCGAGAGCTGCCAGCGGAGATCCTGCGGCCACTGCACGGAGTCGCGAATGTGGGATGA
Upstream 100 bases:
>100_bases GGGCAGAGCGTGTCCGGGGCCCGCGCCCCGGAGCGAAAGGCGGCGCCCCAGTTGACGGTCATCGAGGGGGGCGCGGCTGA CATACGATGAGCGGGGAGGC
Downstream 100 bases:
>100_bases GGCCAAGGAGGGTGGCACCACGCGCGTCCTGGTGGTGGATGACGACGCGGGCGTTCGCTTCACGCTGCGGGAGATGCTCA AGAGCCTCTCCGGCGTCGAG
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSGRGPMDSRTQRYFEDIQLKHFGRLFGRLVRVRLFLSLLLLLSAVCVAVIDGAPWRCVFMSVVGVGAFTYFFHEFRRFQ RDGVDARSVPLNLWMGQIILTSIIVGTGGIASPVLPAALPLGFLSSLAATPRDRSRLLMAQLSTLMAVSFFQISGLVQGL PLWFLGAPSAVLLVAGALVTAIMLCVCSAAGGAIRTTFDNMLSEALASRDELLATHRSYAGALEAMSGEIAHELKNPLAT VKGLTQLMAREAGRAQPAERLQVLSGEVVRMQGILEEFLNFTRPLVPLTVSPVDLGALCDEALVLHEGLAAGHGVRLERK GTEGVEAVCDSRKVKQVLMNLLHNAIEACPTGGRVTVEVRALPVGEARVFVRDSGPGLASDLEARVFDAGVTTKAKGSGL GLTVARALARQHGGDVTLANAVGGGCEAALTLPRELPAEILRPLHGVANVG
Sequences:
>Translated_451_residues MSGRGPMDSRTQRYFEDIQLKHFGRLFGRLVRVRLFLSLLLLLSAVCVAVIDGAPWRCVFMSVVGVGAFTYFFHEFRRFQ RDGVDARSVPLNLWMGQIILTSIIVGTGGIASPVLPAALPLGFLSSLAATPRDRSRLLMAQLSTLMAVSFFQISGLVQGL PLWFLGAPSAVLLVAGALVTAIMLCVCSAAGGAIRTTFDNMLSEALASRDELLATHRSYAGALEAMSGEIAHELKNPLAT VKGLTQLMAREAGRAQPAERLQVLSGEVVRMQGILEEFLNFTRPLVPLTVSPVDLGALCDEALVLHEGLAAGHGVRLERK GTEGVEAVCDSRKVKQVLMNLLHNAIEACPTGGRVTVEVRALPVGEARVFVRDSGPGLASDLEARVFDAGVTTKAKGSGL GLTVARALARQHGGDVTLANAVGGGCEAALTLPRELPAEILRPLHGVANVG >Mature_450_residues SGRGPMDSRTQRYFEDIQLKHFGRLFGRLVRVRLFLSLLLLLSAVCVAVIDGAPWRCVFMSVVGVGAFTYFFHEFRRFQR DGVDARSVPLNLWMGQIILTSIIVGTGGIASPVLPAALPLGFLSSLAATPRDRSRLLMAQLSTLMAVSFFQISGLVQGLP LWFLGAPSAVLLVAGALVTAIMLCVCSAAGGAIRTTFDNMLSEALASRDELLATHRSYAGALEAMSGEIAHELKNPLATV KGLTQLMAREAGRAQPAERLQVLSGEVVRMQGILEEFLNFTRPLVPLTVSPVDLGALCDEALVLHEGLAAGHGVRLERKG TEGVEAVCDSRKVKQVLMNLLHNAIEACPTGGRVTVEVRALPVGEARVFVRDSGPGLASDLEARVFDAGVTTKAKGSGLG LTVARALARQHGGDVTLANAVGGGCEAALTLPRELPAEILRPLHGVANVG
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=270, Percent_Identity=30.7407407407407, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1788549, Length=213, Percent_Identity=30.9859154929577, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI48994928, Length=239, Percent_Identity=27.6150627615063, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790300, Length=215, Percent_Identity=29.3023255813954, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1786600, Length=232, Percent_Identity=22.8448275862069, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1787894, Length=214, Percent_Identity=28.5046728971963, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789149, Length=213, Percent_Identity=26.2910798122066, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790861, Length=224, Percent_Identity=29.0178571428571, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788713, Length=224, Percent_Identity=24.5535714285714, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=24.7787610619469, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47857; Mature: 47725
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRGPMDSRTQRYFEDIQLKHFGRLFGRLVRVRLFLSLLLLLSAVCVAVIDGAPWRCVF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH MSVVGVGAFTYFFHEFRRFQRDGVDARSVPLNLWMGQIILTSIIVGTGGIASPVLPAALP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LGFLSSLAATPRDRSRLLMAQLSTLMAVSFFQISGLVQGLPLWFLGAPSAVLLVAGALVT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHH AIMLCVCSAAGGAIRTTFDNMLSEALASRDELLATHRSYAGALEAMSGEIAHELKNPLAT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKGLTQLMAREAGRAQPAERLQVLSGEVVRMQGILEEFLNFTRPLVPLTVSPVDLGALCD HHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHH EALVLHEGLAAGHGVRLERKGTEGVEAVCDSRKVKQVLMNLLHNAIEACPTGGRVTVEVR HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE ALPVGEARVFVRDSGPGLASDLEARVFDAGVTTKAKGSGLGLTVARALARQHGGDVTLAN EEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEC AVGGGCEAALTLPRELPAEILRPLHGVANVG CCCCCCHHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SGRGPMDSRTQRYFEDIQLKHFGRLFGRLVRVRLFLSLLLLLSAVCVAVIDGAPWRCVF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH MSVVGVGAFTYFFHEFRRFQRDGVDARSVPLNLWMGQIILTSIIVGTGGIASPVLPAALP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LGFLSSLAATPRDRSRLLMAQLSTLMAVSFFQISGLVQGLPLWFLGAPSAVLLVAGALVT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHH AIMLCVCSAAGGAIRTTFDNMLSEALASRDELLATHRSYAGALEAMSGEIAHELKNPLAT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKGLTQLMAREAGRAQPAERLQVLSGEVVRMQGILEEFLNFTRPLVPLTVSPVDLGALCD HHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHH EALVLHEGLAAGHGVRLERKGTEGVEAVCDSRKVKQVLMNLLHNAIEACPTGGRVTVEVR HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE ALPVGEARVFVRDSGPGLASDLEARVFDAGVTTKAKGSGLGLTVARALARQHGGDVTLAN EEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEC AVGGGCEAALTLPRELPAEILRPLHGVANVG CCCCCCHHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]