| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is yusP [H]
Identifier: 108759194
GI number: 108759194
Start: 6050649
End: 6052112
Strand: Direct
Name: yusP [H]
Synonym: MXAN_4836
Alternate gene names: 108759194
Gene position: 6050649-6052112 (Clockwise)
Preceding gene: 108762583
Following gene: 108759046
Centisome position: 66.2
GC content: 68.24
Gene sequence:
>1464_bases ATGCGAACCACTCATCGTCCCCTCACCACCTTGGCCCTGGCCTTGAGCCTCTTCATGGCCGCCTTGGAAGCCACTGTCGT TTCCACGGCCATGCCCACGGTGGTGGGCGAGTTGGGCGGCATCCAGCACTACGCGTGGGTCTTCACCGCGTACATGTTGT CCTCCACCATCACCGTGCCCATCTACGGGAAGCTGGCGGACCTCTACGGCCGCAAGCCCGTGCTCGTGTTCGGCATCGTG CTGTTCCTCGTGGGCTCCATCGCCAGTGGCCTGTCCACGTCCATGGCCATGTTGATCGGCTTCCGGACGCTCCAGGGCCT GGGCGCGGGCGCCATGCAGCCGGTGGCGCTCACCGTCATCGGGGACATCTACACGCTGGAGGAGCGCGCGAAGGTCCAGG GCGCGTTCAGCGCGGTGTGGGGCATCGCGGGACTGATCGGGCCCATCACCGGTGGCTTCCTCGTGAAGTACCTCACGTGG CACTGGGTCTTCTTCATCAACGTCCCGGTGGGCGTGGGCTGCCTCGTCCTGCTCCTGAGCTACTTCCATGAGCGCGTGGA GCGGAAGCCCCAGAAGCTGGACTACGCGGGCGCCGCGCTGCTCACCGGCTGGGTGGTGGCGCTGCTCGTCGGCGTGCAAG GTGTGGGCGTGAATCTGTGGGGCTTGCCCGTGGCGGCCGTGCTGCTCGCGGCCTTCGTCGCGGTGGAGCGCAAGGTGGCC GAGCCCATCATCCCCATGTCCATCTTCAAGGTGCCGGCCATCGTCATCTCCTCCATCGCGGGAGCGCTCTTCTCCGCGGC GATGTTCGGGGCCACCACCTACGTTCCGCTCTTCGTCCAGGGCGTCCTGGGCGGAACGCCCACCGAGGCCGGCGGGATGA TTACGCCGATGATTGTCGGCTGGCCGCTGGCGGCCCTCGTGGCCGGGAAGCTGCTGCTCAAGACGGGCTTCCGCCCCCTC ATCGTGGGCGGGCTGGGATTGACGGTGGTGGGCACGTCGCTGATGGCGCTGCTCCTGGGGCCCCAGGCGCCCAGGCTGCT GCCGGAGGTGGCCATGGGCCTGTTCGGCATCGGCATGGGCTTCGCGTCCACCGCGCTGCTCATCGCCGTGCAGACCAGCG TGGGCTGGGAGCTGCGCGGAGTGGCCACCGCCAGCAACATGTTCTTCCGCACCATCGGCGGCGCCATTGGCGTGGGGCTG ATGGGCGGCGTCATGGTGTCGCAGCTCCTCAAGGACCCGACGGTGCCGATTTCGGCGGCCAACGCCTTGATGAGCCCCGA CCACGGCCAGGACTTGCCCGCGGATCTGCTGGCGACGCTGAGCGGCGCGCTGGGCACCGGGCTGAGCATCAACTTCTGGC TGATCTGCGCCTTCACCGTGGCCGCCTTCGCCGCAGGGCTGTTCTTCCCCAAGGTGTCGCGCACCACGACGGTGTCCTCC ACCGAGGTGGTGGCGCCGCACTGA
Upstream 100 bases:
>100_bases CGCCCGCACGCTGAGTGACCACCCGGGGCGCGAGGCCGCTTGTTGCTGGCGACCCCCGCCCGCAGCCGTTAAGGAGGGCC TCTCCCGCGTCGGCGTCTTC
Downstream 100 bases:
>100_bases CGTCCGTGCGGCGCCCCGTGCGTCGCTCAGAGGCCGTCAATCATCCGCAGGGCCACGTCCGGCACGAACGTGCCTGCGGG TGTGTTGGGCGCGACGCCGC
Product: EmrB/QacA family drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MRTTHRPLTTLALALSLFMAALEATVVSTAMPTVVGELGGIQHYAWVFTAYMLSSTITVPIYGKLADLYGRKPVLVFGIV LFLVGSIASGLSTSMAMLIGFRTLQGLGAGAMQPVALTVIGDIYTLEERAKVQGAFSAVWGIAGLIGPITGGFLVKYLTW HWVFFINVPVGVGCLVLLLSYFHERVERKPQKLDYAGAALLTGWVVALLVGVQGVGVNLWGLPVAAVLLAAFVAVERKVA EPIIPMSIFKVPAIVISSIAGALFSAAMFGATTYVPLFVQGVLGGTPTEAGGMITPMIVGWPLAALVAGKLLLKTGFRPL IVGGLGLTVVGTSLMALLLGPQAPRLLPEVAMGLFGIGMGFASTALLIAVQTSVGWELRGVATASNMFFRTIGGAIGVGL MGGVMVSQLLKDPTVPISAANALMSPDHGQDLPADLLATLSGALGTGLSINFWLICAFTVAAFAAGLFFPKVSRTTTVSS TEVVAPH
Sequences:
>Translated_487_residues MRTTHRPLTTLALALSLFMAALEATVVSTAMPTVVGELGGIQHYAWVFTAYMLSSTITVPIYGKLADLYGRKPVLVFGIV LFLVGSIASGLSTSMAMLIGFRTLQGLGAGAMQPVALTVIGDIYTLEERAKVQGAFSAVWGIAGLIGPITGGFLVKYLTW HWVFFINVPVGVGCLVLLLSYFHERVERKPQKLDYAGAALLTGWVVALLVGVQGVGVNLWGLPVAAVLLAAFVAVERKVA EPIIPMSIFKVPAIVISSIAGALFSAAMFGATTYVPLFVQGVLGGTPTEAGGMITPMIVGWPLAALVAGKLLLKTGFRPL IVGGLGLTVVGTSLMALLLGPQAPRLLPEVAMGLFGIGMGFASTALLIAVQTSVGWELRGVATASNMFFRTIGGAIGVGL MGGVMVSQLLKDPTVPISAANALMSPDHGQDLPADLLATLSGALGTGLSINFWLICAFTVAAFAAGLFFPKVSRTTTVSS TEVVAPH >Mature_487_residues MRTTHRPLTTLALALSLFMAALEATVVSTAMPTVVGELGGIQHYAWVFTAYMLSSTITVPIYGKLADLYGRKPVLVFGIV LFLVGSIASGLSTSMAMLIGFRTLQGLGAGAMQPVALTVIGDIYTLEERAKVQGAFSAVWGIAGLIGPITGGFLVKYLTW HWVFFINVPVGVGCLVLLLSYFHERVERKPQKLDYAGAALLTGWVVALLVGVQGVGVNLWGLPVAAVLLAAFVAVERKVA EPIIPMSIFKVPAIVISSIAGALFSAAMFGATTYVPLFVQGVLGGTPTEAGGMITPMIVGWPLAALVAGKLLLKTGFRPL IVGGLGLTVVGTSLMALLLGPQAPRLLPEVAMGLFGIGMGFASTALLIAVQTSVGWELRGVATASNMFFRTIGGAIGVGL MGGVMVSQLLKDPTVPISAANALMSPDHGQDLPADLLATLSGALGTGLSINFWLICAFTVAAFAAGLFFPKVSRTTTVSS TEVVAPH
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=294, Percent_Identity=30.952380952381, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI1790195, Length=328, Percent_Identity=29.5731707317073, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI87081983, Length=412, Percent_Identity=26.9417475728155, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1788710, Length=424, Percent_Identity=28.5377358490566, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1788392, Length=340, Percent_Identity=29.4117647058824, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1790146, Length=167, Percent_Identity=28.1437125748503, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788509, Length=116, Percent_Identity=35.3448275862069, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6322958, Length=551, Percent_Identity=24.1379310344828, Blast_Score=124, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6325455, Length=530, Percent_Identity=25.2830188679245, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6323735, Length=319, Percent_Identity=26.9592476489028, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6321663, Length=149, Percent_Identity=32.2147651006711, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6319770, Length=395, Percent_Identity=28.3544303797468, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6324954, Length=383, Percent_Identity=24.0208877284595, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50542; Mature: 50542
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTHRPLTTLALALSLFMAALEATVVSTAMPTVVGELGGIQHYAWVFTAYMLSSTITVP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEE IYGKLADLYGRKPVLVFGIVLFLVGSIASGLSTSMAMLIGFRTLQGLGAGAMQPVALTVI EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH GDIYTLEERAKVQGAFSAVWGIAGLIGPITGGFLVKYLTWHWVFFINVPVGVGCLVLLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHH YFHERVERKPQKLDYAGAALLTGWVVALLVGVQGVGVNLWGLPVAAVLLAAFVAVERKVA HHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH EPIIPMSIFKVPAIVISSIAGALFSAAMFGATTYVPLFVQGVLGGTPTEAGGMITPMIVG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH WPLAALVAGKLLLKTGFRPLIVGGLGLTVVGTSLMALLLGPQAPRLLPEVAMGLFGIGMG HHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FASTALLIAVQTSVGWELRGVATASNMFFRTIGGAIGVGLMGGVMVSQLLKDPTVPISAA HHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH NALMSPDHGQDLPADLLATLSGALGTGLSINFWLICAFTVAAFAAGLFFPKVSRTTTVSS HHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCC TEVVAPH CCCCCCC >Mature Secondary Structure MRTTHRPLTTLALALSLFMAALEATVVSTAMPTVVGELGGIQHYAWVFTAYMLSSTITVP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEE IYGKLADLYGRKPVLVFGIVLFLVGSIASGLSTSMAMLIGFRTLQGLGAGAMQPVALTVI EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH GDIYTLEERAKVQGAFSAVWGIAGLIGPITGGFLVKYLTWHWVFFINVPVGVGCLVLLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHH YFHERVERKPQKLDYAGAALLTGWVVALLVGVQGVGVNLWGLPVAAVLLAAFVAVERKVA HHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH EPIIPMSIFKVPAIVISSIAGALFSAAMFGATTYVPLFVQGVLGGTPTEAGGMITPMIVG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH WPLAALVAGKLLLKTGFRPLIVGGLGLTVVGTSLMALLLGPQAPRLLPEVAMGLFGIGMG HHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FASTALLIAVQTSVGWELRGVATASNMFFRTIGGAIGVGLMGGVMVSQLLKDPTVPISAA HHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH NALMSPDHGQDLPADLLATLSGALGTGLSINFWLICAFTVAAFAAGLFFPKVSRTTTVSS HHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCC TEVVAPH CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]