Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
---|---|
Accession | NC_008095 |
Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108759052
Identifier: 108759052
GI number: 108759052
Start: 5823559
End: 5825160
Strand: Direct
Name: 108759052
Synonym: MXAN_4641
Alternate gene names: NA
Gene position: 5823559-5825160 (Clockwise)
Preceding gene: 108758154
Following gene: 108762277
Centisome position: 63.72
GC content: 70.47
Gene sequence:
>1602_bases ATGGCCCACCCCTCCCTGACGCGGCGCGCGCGGCGCTCCGCACTCATCGTCGCCGGCAGCCTGGCCGCCGCCTGTGGCGG CAGTGAACCGCCCCCTCCCACGCCGGATCCCCCCCAGGTCGCCCTGACGGTGCCCGCGAGCATCATCTCCGACGACAAGC TCCAGGTCATCGTCACGGTGTCCGGCTGCGAGGGCGGCTCGACGCTCAACGTCAATGACCGGGAGACCCTGCTCCGGACC TTCCCGCACAGCGGCGGCACCATGACGCTGACGCTGGAGCGCAACGACATTCCCTACGCCACAGCGGGCCTGGCCGCGAA CCTGTCGTTGAACGCGGTGGCCACGTGCTCTGACGGGCGTACGAATCGCTCGCAGCCCGCCCCTGTCTCCTACTTCCCGG TGCAGCGCCGCATCGTGGAGCCGCAGAACGCCGGACAGGTCGTCACCGACCACTTCGTCATCGACGGCACCAGCGCCAAC CCGACCTTCTTGGGCTGCGGCGTCCCGCCGACGGAGATTTCCACGCTGTACCGCGTGAACCTCAGCGGCAAGGTGACGGG CACTGTCGGAATGCCCATCGCCTGCACCCCCGAGACGGTCATCACCGAGCGCAACCCCATCAGCGGCAAGCGCTGGGTGT GGACCCCGAACGTGGGCGCCTTCGCCGTGGACGCCGACCTGCGCATCACCGCGCGCACGACGACGGACATCGGCCCCACG CAACTCACTGTGCTGCCGGGCGGTGACGCCATCATCGTCAACCGCATCGACGAGGTGCGCCGGCTCTCCCACAACCCCGA CGGCACGTCGGAGAGCGTGGCCGAGGTCAAGTGGCTCTACGCGCCCACGACGCTGGAGAGCGTCATCGCTCCGCCCCTGG TTCGCGCGGACGGGTTGATTCTCATCGCCTCACTGGGCACGGGCCCGGATGCTTCGCGCACGGACGTCACCGTCACCGAA CTGTACGCGGGCGAGACGGGTGAGCAGGGCGCCGGCGGAACGGCCCGGGCCGCATACAAGCTACGGACCTTCGCGCGCAA CGAGCGCCTCCCCCTGGGCGCCTTCAACGACACGGGCAACACGCTCTTCCTGGGCCTCCAGCTCGGCTCGGAGCAGTCGC AGGTCATCGCGTGCGCCGCGAACCAGGACGAGTGCGAGGGCGCTCGGCTCCAGTGGACCAGCCCCGCGCTCCCGGTGCCG CTGGCGCACATCCTCTATCACCCGGGCGCCTCGCGCCTCGTCGCGGTGGGCCAGCAGCGCGTGTGGTTCCTCGACGCGTC GGGGCAGATTCGCAACCGGGACAACCGCTCCATCGACGCGAATGGCGCGCTGAACGTGCTCCAGGTGCTGCGCCGGCCGA ACTCGCCGGAGCTCTTCCTGCTCAACGCGCCGGCCCGCGGACTGGATGGCGCGCCGACGCTGCCCAACGAAATCGTCGCC GTGGACCAGACGTCCGGCGGCGAGGCCCGCGAGCTGTTCCGCCACCAGGTGGTCGGCAGCCTGGGCGGTGCAATCGACCC GGAAGGCCGGCTGTGGGTCCGCACTGGCTTCGACGTGGTGCAGACGCTGCCTCTGTCCGACTACCGCCGCTACCGGCCGT AG
Upstream 100 bases:
>100_bases GGGACGTTCCGCACCCAGGGGGGAGAGAGAATCGGTTCGGGCCTCTCCGGCAAACGGGCCTGGATGCCTGGGACGCCGCG TACCGGCTAGAGTCGGCGCC
Downstream 100 bases:
>100_bases CGCGCGCGACTCAGGGCCTGCTGGCGACGAGGAGTGCCTCCACGTTGCCAGCGGGCCCGGGCACCGTGGAGTCCATCAAC CCGAGTACCTCCAGGCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MAHPSLTRRARRSALIVAGSLAAACGGSEPPPPTPDPPQVALTVPASIISDDKLQVIVTVSGCEGGSTLNVNDRETLLRT FPHSGGTMTLTLERNDIPYATAGLAANLSLNAVATCSDGRTNRSQPAPVSYFPVQRRIVEPQNAGQVVTDHFVIDGTSAN PTFLGCGVPPTEISTLYRVNLSGKVTGTVGMPIACTPETVITERNPISGKRWVWTPNVGAFAVDADLRITARTTTDIGPT QLTVLPGGDAIIVNRIDEVRRLSHNPDGTSESVAEVKWLYAPTTLESVIAPPLVRADGLILIASLGTGPDASRTDVTVTE LYAGETGEQGAGGTARAAYKLRTFARNERLPLGAFNDTGNTLFLGLQLGSEQSQVIACAANQDECEGARLQWTSPALPVP LAHILYHPGASRLVAVGQQRVWFLDASGQIRNRDNRSIDANGALNVLQVLRRPNSPELFLLNAPARGLDGAPTLPNEIVA VDQTSGGEARELFRHQVVGSLGGAIDPEGRLWVRTGFDVVQTLPLSDYRRYRP
Sequences:
>Translated_533_residues MAHPSLTRRARRSALIVAGSLAAACGGSEPPPPTPDPPQVALTVPASIISDDKLQVIVTVSGCEGGSTLNVNDRETLLRT FPHSGGTMTLTLERNDIPYATAGLAANLSLNAVATCSDGRTNRSQPAPVSYFPVQRRIVEPQNAGQVVTDHFVIDGTSAN PTFLGCGVPPTEISTLYRVNLSGKVTGTVGMPIACTPETVITERNPISGKRWVWTPNVGAFAVDADLRITARTTTDIGPT QLTVLPGGDAIIVNRIDEVRRLSHNPDGTSESVAEVKWLYAPTTLESVIAPPLVRADGLILIASLGTGPDASRTDVTVTE LYAGETGEQGAGGTARAAYKLRTFARNERLPLGAFNDTGNTLFLGLQLGSEQSQVIACAANQDECEGARLQWTSPALPVP LAHILYHPGASRLVAVGQQRVWFLDASGQIRNRDNRSIDANGALNVLQVLRRPNSPELFLLNAPARGLDGAPTLPNEIVA VDQTSGGEARELFRHQVVGSLGGAIDPEGRLWVRTGFDVVQTLPLSDYRRYRP >Mature_532_residues AHPSLTRRARRSALIVAGSLAAACGGSEPPPPTPDPPQVALTVPASIISDDKLQVIVTVSGCEGGSTLNVNDRETLLRTF PHSGGTMTLTLERNDIPYATAGLAANLSLNAVATCSDGRTNRSQPAPVSYFPVQRRIVEPQNAGQVVTDHFVIDGTSANP TFLGCGVPPTEISTLYRVNLSGKVTGTVGMPIACTPETVITERNPISGKRWVWTPNVGAFAVDADLRITARTTTDIGPTQ LTVLPGGDAIIVNRIDEVRRLSHNPDGTSESVAEVKWLYAPTTLESVIAPPLVRADGLILIASLGTGPDASRTDVTVTEL YAGETGEQGAGGTARAAYKLRTFARNERLPLGAFNDTGNTLFLGLQLGSEQSQVIACAANQDECEGARLQWTSPALPVPL AHILYHPGASRLVAVGQQRVWFLDASGQIRNRDNRSIDANGALNVLQVLRRPNSPELFLLNAPARGLDGAPTLPNEIVAV DQTSGGEARELFRHQVVGSLGGAIDPEGRLWVRTGFDVVQTLPLSDYRRYRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56624; Mature: 56492
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPSLTRRARRSALIVAGSLAAACGGSEPPPPTPDPPQVALTVPASIISDDKLQVIVTV CCCCHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCCCCCEEEEECHHHCCCCCEEEEEEE SGCEGGSTLNVNDRETLLRTFPHSGGTMTLTLERNDIPYATAGLAANLSLNAVATCSDGR ECCCCCCEECCCHHHHHHHHCCCCCCEEEEEEECCCCCEEECCEEECCEEEEEEEECCCC TNRSQPAPVSYFPVQRRIVEPQNAGQVVTDHFVIDGTSANPTFLGCGVPPTEISTLYRVN CCCCCCCCEEECCCHHEEECCCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCEEEEEEE LSGKVTGTVGMPIACTPETVITERNPISGKRWVWTPNVGAFAVDADLRITARTTTDIGPT ECCEEEEECCCCEEECCCCEEECCCCCCCCEEEECCCCCCEEEECCEEEEEEECCCCCCE QLTVLPGGDAIIVNRIDEVRRLSHNPDGTSESVAEVKWLYAPTTLESVIAPPLVRADGLI EEEEECCCCEEEEECHHHHHHHCCCCCCCCCCHHEEEEEECCCHHHHHHCCCCCCCCCEE LIASLGTGPDASRTDVTVTELYAGETGEQGAGGTARAAYKLRTFARNERLPLGAFNDTGN EEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCC TLFLGLQLGSEQSQVIACAANQDECEGARLQWTSPALPVPLAHILYHPGASRLVAVGQQR EEEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCEEEECCCE VWFLDASGQIRNRDNRSIDANGALNVLQVLRRPNSPELFLLNAPARGLDGAPTLPNEIVA EEEEECCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEE VDQTSGGEARELFRHQVVGSLGGAIDPEGRLWVRTGFDVVQTLPLSDYRRYRP EECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCHHHHCCCC >Mature Secondary Structure AHPSLTRRARRSALIVAGSLAAACGGSEPPPPTPDPPQVALTVPASIISDDKLQVIVTV CCCHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCCCCCEEEEECHHHCCCCCEEEEEEE SGCEGGSTLNVNDRETLLRTFPHSGGTMTLTLERNDIPYATAGLAANLSLNAVATCSDGR ECCCCCCEECCCHHHHHHHHCCCCCCEEEEEEECCCCCEEECCEEECCEEEEEEEECCCC TNRSQPAPVSYFPVQRRIVEPQNAGQVVTDHFVIDGTSANPTFLGCGVPPTEISTLYRVN CCCCCCCCEEECCCHHEEECCCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCEEEEEEE LSGKVTGTVGMPIACTPETVITERNPISGKRWVWTPNVGAFAVDADLRITARTTTDIGPT ECCEEEEECCCCEEECCCCEEECCCCCCCCEEEECCCCCCEEEECCEEEEEEECCCCCCE QLTVLPGGDAIIVNRIDEVRRLSHNPDGTSESVAEVKWLYAPTTLESVIAPPLVRADGLI EEEEECCCCEEEEECHHHHHHHCCCCCCCCCCHHEEEEEECCCHHHHHHCCCCCCCCCEE LIASLGTGPDASRTDVTVTELYAGETGEQGAGGTARAAYKLRTFARNERLPLGAFNDTGN EEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCC TLFLGLQLGSEQSQVIACAANQDECEGARLQWTSPALPVPLAHILYHPGASRLVAVGQQR EEEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCEEEECCCE VWFLDASGQIRNRDNRSIDANGALNVLQVLRRPNSPELFLLNAPARGLDGAPTLPNEIVA EEEEECCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEE VDQTSGGEARELFRHQVVGSLGGAIDPEGRLWVRTGFDVVQTLPLSDYRRYRP EECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA