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The map label for this gene is tolR [H]

Identifier: 108758607

GI number: 108758607

Start: 1705095

End: 1705595

Strand: Reverse

Name: tolR [H]

Synonym: MXAN_1446

Alternate gene names: 108758607

Gene position: 1705595-1705095 (Counterclockwise)

Preceding gene: 108762288

Following gene: 108757589

Centisome position: 18.66

GC content: 65.27

Gene sequence:

>501_bases
ATGGCCGGCCGCAAGCAACGACAGTGGGTCAAGCCCCAGGCGCAGCCGAACTCGGAGATCAACGTCACGCCGCTGGTTGA
CGTGGTGCTGGTGCTCCTCATCATCTTCATGGTCGTCACGCCGCTCCTCGAGAAGGACATCGTGGTGCGCGTGCCGGACA
CCGAGGTCGACCAGGAGCCGACGCCTCCCGACCCGAACGACCAGCAGTTGGTGGTCCAGCTCGACAAGGACGGTGGCTAC
TCCATCAACACGGAGAAGATTGCCCCCGCCGACTACGTGACGCGGCTCAAGCGCATGCTGGCGGCCAAGAAGGCGGACGA
CAAAGTCGTCTTCTTCATGGCGGATGACGCCACCAACTACGGGCGGCTCATCACTGCGCTGGACGGCGCGAAGACCGCTG
GTGCGAAAGTGCTGGGCATGGCCACGGAGCTGCCGCAGAACGCCATCATCCAGGGCACTTCGGTCGATACGCCGACCCCG
CCCCCCGCACCCACGCCCTGA

Upstream 100 bases:

>100_bases
GTGATAACGCGCTCAGCGTTGGTGACGTGCGCAAGGTGCTGGACGTGGCCCGCAAGTCCAAGGCCAAGCAGATCTCCCTG
GGCGTCGAGGAGAAGAAGTA

Downstream 100 bases:

>100_bases
AACTCCTCTTCCGGAGCCTACGCTCCGGGTGGGTACGTGGTTCACATCGAGAAGCTCGTCGGCTAGAGTTCACTCCTCAT
GGCCGACGAGCTTCTCATTT

Product: biopolymer ExbD/TolR family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MAGRKQRQWVKPQAQPNSEINVTPLVDVVLVLLIIFMVVTPLLEKDIVVRVPDTEVDQEPTPPDPNDQQLVVQLDKDGGY
SINTEKIAPADYVTRLKRMLAAKKADDKVVFFMADDATNYGRLITALDGAKTAGAKVLGMATELPQNAIIQGTSVDTPTP
PPAPTP

Sequences:

>Translated_166_residues
MAGRKQRQWVKPQAQPNSEINVTPLVDVVLVLLIIFMVVTPLLEKDIVVRVPDTEVDQEPTPPDPNDQQLVVQLDKDGGY
SINTEKIAPADYVTRLKRMLAAKKADDKVVFFMADDATNYGRLITALDGAKTAGAKVLGMATELPQNAIIQGTSVDTPTP
PPAPTP
>Mature_165_residues
AGRKQRQWVKPQAQPNSEINVTPLVDVVLVLLIIFMVVTPLLEKDIVVRVPDTEVDQEPTPPDPNDQQLVVQLDKDGGYS
INTEKIAPADYVTRLKRMLAAKKADDKVVFFMADDATNYGRLITALDGAKTAGAKVLGMATELPQNAIIQGTSVDTPTPP
PAPTP

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=126, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 18013; Mature: 17882

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRKQRQWVKPQAQPNSEINVTPLVDVVLVLLIIFMVVTPLLEKDIVVRVPDTEVDQEP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
TPPDPNDQQLVVQLDKDGGYSINTEKIAPADYVTRLKRMLAAKKADDKVVFFMADDATNY
CCCCCCCCEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
GRLITALDGAKTAGAKVLGMATELPQNAIIQGTSVDTPTPPPAPTP
CEEEEECCCCCCCCCEEEHHHHHCCCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGRKQRQWVKPQAQPNSEINVTPLVDVVLVLLIIFMVVTPLLEKDIVVRVPDTEVDQEP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
TPPDPNDQQLVVQLDKDGGYSINTEKIAPADYVTRLKRMLAAKKADDKVVFFMADDATNY
CCCCCCCCEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
GRLITALDGAKTAGAKVLGMATELPQNAIIQGTSVDTPTPPPAPTP
CEEEEECCCCCCCCCEEEHHHHHCCCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]