| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108756915
Identifier: 108756915
GI number: 108756915
Start: 1618845
End: 1619708
Strand: Reverse
Name: 108756915
Synonym: MXAN_1379
Alternate gene names: NA
Gene position: 1619708-1618845 (Counterclockwise)
Preceding gene: 108763137
Following gene: 108757478
Centisome position: 17.72
GC content: 68.87
Gene sequence:
>864_bases ATGCCCGCCCTCCAGGACACGGAGGGCCCTCGCCTGCCCGAAGGACTGCCGCCCGTGGTGGACGCGCACGTCCACCTCTT CCCGGACCGGGTGTTCGACGCGGTGTGGCGCTGGTTCGACCAGTACGGCTGGCCCATCCGCTACAAGCTGCACACGCGAC AGGTCGTGTCCTTCCTCCTGTCGCGAGGTGTCCACCGGGTGGTGGCGCTGCATTACGCCCACCGGCCAGGCATGGCCCGC GCGCTCAACGCCTACGTGGCGGAGGTGGCCCGGGAAGAGCCTCGTGTGCTGGGGCTCGCCACCGTGCTCCCGGGCGAACC CGATGCCACGGCCGTGTTGGAAGAGGCGTTCGACGCGGGCCTGCGTGGGGTGAAGATTCATTGCCACGTTCAATGCTTCT CACCTGACGCGCCGCACCTTCACGAGGTGTATGCCGCGTGCGCGAAGGCGGGCCGTCCGCTCGTCATGCACGCGGGGCGG GAGCCCTCCAGTCCCCACTACAATTGCGACACCTACGCGCTCTGCGCCGCGGAGCGGGTGGAGCGCGTGCTGAAGGACCA TCCCACGCTGAAGCTGTGCGTGCCCCACCTGGGCGCGGACGAGTTCGACGCCTACGCGCGGCTGCTCGAGCGGCACGACA ACCTCTGGCTGGACACCACCATGGCCCTGGCCGGGTACTTCCCCGTCCCCATCCCCCGCCGCGCGCTGGAGGTCCGGCCC GAGCGCATCATCTACGGCACGGACTTTCCCAACATCCCCTACGCCTGGGACCGTGAGCTGCGGACGATGCTGGGGATGAA GTTGGATGACGCGGTACTCGCGGGCATCCTGGGGCAGAATGCGCTCCAGTTGTACGGAGCGTGA
Upstream 100 bases:
>100_bases AGACGGGTGGCTCGCCATGGCCACCGACTCCGACGCTGACGTGCCCGTCCCCTGCCTGGCCTCCGCGCCCACGTGGCGGG ACGCCGGCATCCGCATGCCC
Downstream 100 bases:
>100_bases GCCCCGTGGACATCCGGCTCCGGATGCAAGCCTCGTCCTCACGGGCCGTTCGCTGTTGAAAAGCACCGGGGCCCCTTCCG GAATGGAAGAGGAGTTCCCA
Product: amidohydrolase family protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase; TIM-Barrel Fold Metal-Dependent Hydrolase; Amidase; Amidohydrolase 2 Family Protein; Amidohydrolase Family 2 Protein
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MPALQDTEGPRLPEGLPPVVDAHVHLFPDRVFDAVWRWFDQYGWPIRYKLHTRQVVSFLLSRGVHRVVALHYAHRPGMAR ALNAYVAEVAREEPRVLGLATVLPGEPDATAVLEEAFDAGLRGVKIHCHVQCFSPDAPHLHEVYAACAKAGRPLVMHAGR EPSSPHYNCDTYALCAAERVERVLKDHPTLKLCVPHLGADEFDAYARLLERHDNLWLDTTMALAGYFPVPIPRRALEVRP ERIIYGTDFPNIPYAWDRELRTMLGMKLDDAVLAGILGQNALQLYGA
Sequences:
>Translated_287_residues MPALQDTEGPRLPEGLPPVVDAHVHLFPDRVFDAVWRWFDQYGWPIRYKLHTRQVVSFLLSRGVHRVVALHYAHRPGMAR ALNAYVAEVAREEPRVLGLATVLPGEPDATAVLEEAFDAGLRGVKIHCHVQCFSPDAPHLHEVYAACAKAGRPLVMHAGR EPSSPHYNCDTYALCAAERVERVLKDHPTLKLCVPHLGADEFDAYARLLERHDNLWLDTTMALAGYFPVPIPRRALEVRP ERIIYGTDFPNIPYAWDRELRTMLGMKLDDAVLAGILGQNALQLYGA >Mature_286_residues PALQDTEGPRLPEGLPPVVDAHVHLFPDRVFDAVWRWFDQYGWPIRYKLHTRQVVSFLLSRGVHRVVALHYAHRPGMARA LNAYVAEVAREEPRVLGLATVLPGEPDATAVLEEAFDAGLRGVKIHCHVQCFSPDAPHLHEVYAACAKAGRPLVMHAGRE PSSPHYNCDTYALCAAERVERVLKDHPTLKLCVPHLGADEFDAYARLLERHDNLWLDTTMALAGYFPVPIPRRALEVRPE RIIYGTDFPNIPYAWDRELRTMLGMKLDDAVLAGILGQNALQLYGA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32228; Mature: 32097
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALQDTEGPRLPEGLPPVVDAHVHLFPDRVFDAVWRWFDQYGWPIRYKLHTRQVVSFLL CCCCCCCCCCCCCCCCCCHHHHHHEECHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH SRGVHRVVALHYAHRPGMARALNAYVAEVAREEPRVLGLATVLPGEPDATAVLEEAFDAG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC LRGVKIHCHVQCFSPDAPHLHEVYAACAKAGRPLVMHAGREPSSPHYNCDTYALCAAERV CCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH ERVLKDHPTLKLCVPHLGADEFDAYARLLERHDNLWLDTTMALAGYFPVPIPRRALEVRP HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCCHHHHCCC ERIIYGTDFPNIPYAWDRELRTMLGMKLDDAVLAGILGQNALQLYGA CEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCC >Mature Secondary Structure PALQDTEGPRLPEGLPPVVDAHVHLFPDRVFDAVWRWFDQYGWPIRYKLHTRQVVSFLL CCCCCCCCCCCCCCCCCHHHHHHEECHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH SRGVHRVVALHYAHRPGMARALNAYVAEVAREEPRVLGLATVLPGEPDATAVLEEAFDAG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCC LRGVKIHCHVQCFSPDAPHLHEVYAACAKAGRPLVMHAGREPSSPHYNCDTYALCAAERV CCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH ERVLKDHPTLKLCVPHLGADEFDAYARLLERHDNLWLDTTMALAGYFPVPIPRRALEVRP HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCCHHHHCCC ERIIYGTDFPNIPYAWDRELRTMLGMKLDDAVLAGILGQNALQLYGA CEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA