Click here to switch to the map view.

The map label for this gene is yejA [H]

Identifier: 108563621

GI number: 108563621

Start: 1260956

End: 1261486

Strand: Reverse

Name: yejA [H]

Synonym: HPAG1_1196

Alternate gene names: 108563621

Gene position: 1261486-1260956 (Counterclockwise)

Preceding gene: 108563622

Following gene: 108563620

Centisome position: 79.02

GC content: 37.48

Gene sequence:

>531_bases
ATGAAAATTTTAAGTTTATGGTTAGGGGTGTTTTATTTCCTTAAGGCTACGCCTTATTTATACTTGGGCGAAGAGCCTAA
ATATAAAGACAATTTCACGCATTTTGAATACGCTAACCCTAACGCCAGAAAAGGCGGTGTTTTGAGGAATGACGCTATAG
GGACTTTTGATAGCCTTAACCCTTTTATACTTAAAGGCACTAAAGCCGAAGGCTTGGATTTGATCTATGACACTTTAATG
GTGCAAAGTTTAGACGAACCTTTTGCAGAATACCCCTTGATCGCTAAAGACGCAGAAGTGGCTAAGGATAACAGCTATGT
GATTTTTACCTTAGACAAAAGAGCGAGATTCAGCAATAACGCTCCCATTTTAGCGAGCGATGTGAAGTTTAGCTTTGATA
CGATAATGGAATTAGGATCGCCTATTTATAGGCAGTATTACCAAGATGTTAAAAAGGCGGTTATTTTAGACAAACACCAT
GTAAATTCATTTTCAAAACCACTGAAAATAAAGAGTTGCCTCTCATTTTAG

Upstream 100 bases:

>100_bases
TGATGAAGTGAAAGCCATTTTAAATCACGGCGTCAAAAAAGCCAGGCCTTTAGCGCAAATGACTTACCAAAAGGCTAAAG
AACTAATGGGGTTGGTTTAG

Downstream 100 bases:

>100_bases
GGCAGTTGCAAATCTTTTCCAAAAAAGCGTTTCAAAAGGATTATTTCACCAAAAACCCTTTACTCATTCCTGTTTCTAGC
GGCCCTTATGTGATCGCTTC

Product: oligopeptide ABC transporter

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKILSLWLGVFYFLKATPYLYLGEEPKYKDNFTHFEYANPNARKGGVLRNDAIGTFDSLNPFILKGTKAEGLDLIYDTLM
VQSLDEPFAEYPLIAKDAEVAKDNSYVIFTLDKRARFSNNAPILASDVKFSFDTIMELGSPIYRQYYQDVKKAVILDKHH
VNSFSKPLKIKSCLSF

Sequences:

>Translated_176_residues
MKILSLWLGVFYFLKATPYLYLGEEPKYKDNFTHFEYANPNARKGGVLRNDAIGTFDSLNPFILKGTKAEGLDLIYDTLM
VQSLDEPFAEYPLIAKDAEVAKDNSYVIFTLDKRARFSNNAPILASDVKFSFDTIMELGSPIYRQYYQDVKKAVILDKHH
VNSFSKPLKIKSCLSF
>Mature_176_residues
MKILSLWLGVFYFLKATPYLYLGEEPKYKDNFTHFEYANPNARKGGVLRNDAIGTFDSLNPFILKGTKAEGLDLIYDTLM
VQSLDEPFAEYPLIAKDAEVAKDNSYVIFTLDKRARFSNNAPILASDVKFSFDTIMELGSPIYRQYYQDVKKAVILDKHH
VNSFSKPLKIKSCLSF

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae hbpA [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=154, Percent_Identity=40.2597402597403, Blast_Score=114, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 20128; Mature: 20128

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILSLWLGVFYFLKATPYLYLGEEPKYKDNFTHFEYANPNARKGGVLRNDAIGTFDSLN
CHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCCC
PFILKGTKAEGLDLIYDTLMVQSLDEPFAEYPLIAKDAEVAKDNSYVIFTLDKRARFSNN
CEEEECCCCCCHHHHHHHHHHHHHHCHHHHCCCEECCCHHCCCCCEEEEEECCCCCCCCC
APILASDVKFSFDTIMELGSPIYRQYYQDVKKAVILDKHHVNSFSKPLKIKSCLSF
CCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKILSLWLGVFYFLKATPYLYLGEEPKYKDNFTHFEYANPNARKGGVLRNDAIGTFDSLN
CHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCCC
PFILKGTKAEGLDLIYDTLMVQSLDEPFAEYPLIAKDAEVAKDNSYVIFTLDKRARFSNN
CEEEECCCCCCHHHHHHHHHHHHHHCHHHHCCCEECCCHHCCCCCEEEEEECCCCCCCCC
APILASDVKFSFDTIMELGSPIYRQYYQDVKKAVILDKHHVNSFSKPLKIKSCLSF
CCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097040 [H]