Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is 108563607
Identifier: 108563607
GI number: 108563607
Start: 1245751
End: 1246323
Strand: Reverse
Name: 108563607
Synonym: HPAG1_1182
Alternate gene names: NA
Gene position: 1246323-1245751 (Counterclockwise)
Preceding gene: 108563608
Following gene: 108563600
Centisome position: 78.07
GC content: 41.88
Gene sequence:
>573_bases ATGGAGCTTATTTTAGGCTCTCAATCTAGCGCTAGGGCGAATCTTTTAAAAGAGCATGGGATTAAGTTTGAACAAAAAGC ACTCTATTTTGATGAAGAAAGCCTAAAAACCACAGACCCTAGGGAGTTTGTCTATTTAGCGTGCAAGGGGAAATTAGAAA AAGCTAAAGAGTTACTTGCGAATAATTGCGTTATCGTGGTGGCTGATAGCGTGGTGAGCGTGGGTAATCGCATGCAACGA AAAGCTAAAAACAAGCAAGAAGCCCTTGAATTTTTAAAACGCCAAAATGGCAATGAAATAGAGGTTTTAACCTGCTCGGC ATTGATTTCTCCTGTGTTGGAATGGTTGGATTTATCGGTTTTTAGAGCGCGTTTAAAGGCGTTTGATCCTAGCGAGATAG AAAAATATTTAGAGAGCGGATTGTGGCAAGAAAGCACGGGTTGCGTGCGGTTAGAGGACTTTCACAAGCCCTATATTAAA AGCTCAAGCAAGAATTTGAGCGTGGGGTTGGGGCTGAATGTGGAAAGCTTGTTGGGGGTGCTAAAATTGGGGGCTAAACT TTCATCGTTATAA
Upstream 100 bases:
>100_bases AGAGATGATTTTGCGAGCGCTGGAGGTAAGGATATTGAAAATTTGCAAGCCGCGCTCAATTTAGCGAAAAATACCGCTCT TAAAGCTTTAGAGGGATAGC
Downstream 100 bases:
>100_bases ACGCTGTTATTTTATAAACATTAAAAACACTCTATCTAACTGATAAACCCCCTTGACAAAAAAAAACGATATAATACAAC ATTTGATGTTTAAGGAGTTG
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MELILGSQSSARANLLKEHGIKFEQKALYFDEESLKTTDPREFVYLACKGKLEKAKELLANNCVIVVADSVVSVGNRMQR KAKNKQEALEFLKRQNGNEIEVLTCSALISPVLEWLDLSVFRARLKAFDPSEIEKYLESGLWQESTGCVRLEDFHKPYIK SSSKNLSVGLGLNVESLLGVLKLGAKLSSL
Sequences:
>Translated_190_residues MELILGSQSSARANLLKEHGIKFEQKALYFDEESLKTTDPREFVYLACKGKLEKAKELLANNCVIVVADSVVSVGNRMQR KAKNKQEALEFLKRQNGNEIEVLTCSALISPVLEWLDLSVFRARLKAFDPSEIEKYLESGLWQESTGCVRLEDFHKPYIK SSSKNLSVGLGLNVESLLGVLKLGAKLSSL >Mature_190_residues MELILGSQSSARANLLKEHGIKFEQKALYFDEESLKTTDPREFVYLACKGKLEKAKELLANNCVIVVADSVVSVGNRMQR KAKNKQEALEFLKRQNGNEIEVLTCSALISPVLEWLDLSVFRARLKAFDPSEIEKYLESGLWQESTGCVRLEDFHKPYIK SSSKNLSVGLGLNVESLLGVLKLGAKLSSL
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21221; Mature: 21221
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELILGSQSSARANLLKEHGIKFEQKALYFDEESLKTTDPREFVYLACKGKLEKAKELLA CCEEECCCCHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCEEEEEECCCHHHHHHHHH NNCVIVVADSVVSVGNRMQRKAKNKQEALEFLKRQNGNEIEVLTCSALISPVLEWLDLSV CCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH FRARLKAFDPSEIEKYLESGLWQESTGCVRLEDFHKPYIKSSSKNLSVGLGLNVESLLGV HHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEHHHCCHHHCCCCCCEEEEECCCHHHHHHH LKLGAKLSSL HHHHHHHCCC >Mature Secondary Structure MELILGSQSSARANLLKEHGIKFEQKALYFDEESLKTTDPREFVYLACKGKLEKAKELLA CCEEECCCCHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCEEEEEECCCHHHHHHHHH NNCVIVVADSVVSVGNRMQRKAKNKQEALEFLKRQNGNEIEVLTCSALISPVLEWLDLSV CCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH FRARLKAFDPSEIEKYLESGLWQESTGCVRLEDFHKPYIKSSSKNLSVGLGLNVESLLGV HHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEHHHCCHHHCCCCCCEEEEECCCHHHHHHH LKLGAKLSSL HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]