Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563607

Identifier: 108563607

GI number: 108563607

Start: 1245751

End: 1246323

Strand: Reverse

Name: 108563607

Synonym: HPAG1_1182

Alternate gene names: NA

Gene position: 1246323-1245751 (Counterclockwise)

Preceding gene: 108563608

Following gene: 108563600

Centisome position: 78.07

GC content: 41.88

Gene sequence:

>573_bases
ATGGAGCTTATTTTAGGCTCTCAATCTAGCGCTAGGGCGAATCTTTTAAAAGAGCATGGGATTAAGTTTGAACAAAAAGC
ACTCTATTTTGATGAAGAAAGCCTAAAAACCACAGACCCTAGGGAGTTTGTCTATTTAGCGTGCAAGGGGAAATTAGAAA
AAGCTAAAGAGTTACTTGCGAATAATTGCGTTATCGTGGTGGCTGATAGCGTGGTGAGCGTGGGTAATCGCATGCAACGA
AAAGCTAAAAACAAGCAAGAAGCCCTTGAATTTTTAAAACGCCAAAATGGCAATGAAATAGAGGTTTTAACCTGCTCGGC
ATTGATTTCTCCTGTGTTGGAATGGTTGGATTTATCGGTTTTTAGAGCGCGTTTAAAGGCGTTTGATCCTAGCGAGATAG
AAAAATATTTAGAGAGCGGATTGTGGCAAGAAAGCACGGGTTGCGTGCGGTTAGAGGACTTTCACAAGCCCTATATTAAA
AGCTCAAGCAAGAATTTGAGCGTGGGGTTGGGGCTGAATGTGGAAAGCTTGTTGGGGGTGCTAAAATTGGGGGCTAAACT
TTCATCGTTATAA

Upstream 100 bases:

>100_bases
AGAGATGATTTTGCGAGCGCTGGAGGTAAGGATATTGAAAATTTGCAAGCCGCGCTCAATTTAGCGAAAAATACCGCTCT
TAAAGCTTTAGAGGGATAGC

Downstream 100 bases:

>100_bases
ACGCTGTTATTTTATAAACATTAAAAACACTCTATCTAACTGATAAACCCCCTTGACAAAAAAAAACGATATAATACAAC
ATTTGATGTTTAAGGAGTTG

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MELILGSQSSARANLLKEHGIKFEQKALYFDEESLKTTDPREFVYLACKGKLEKAKELLANNCVIVVADSVVSVGNRMQR
KAKNKQEALEFLKRQNGNEIEVLTCSALISPVLEWLDLSVFRARLKAFDPSEIEKYLESGLWQESTGCVRLEDFHKPYIK
SSSKNLSVGLGLNVESLLGVLKLGAKLSSL

Sequences:

>Translated_190_residues
MELILGSQSSARANLLKEHGIKFEQKALYFDEESLKTTDPREFVYLACKGKLEKAKELLANNCVIVVADSVVSVGNRMQR
KAKNKQEALEFLKRQNGNEIEVLTCSALISPVLEWLDLSVFRARLKAFDPSEIEKYLESGLWQESTGCVRLEDFHKPYIK
SSSKNLSVGLGLNVESLLGVLKLGAKLSSL
>Mature_190_residues
MELILGSQSSARANLLKEHGIKFEQKALYFDEESLKTTDPREFVYLACKGKLEKAKELLANNCVIVVADSVVSVGNRMQR
KAKNKQEALEFLKRQNGNEIEVLTCSALISPVLEWLDLSVFRARLKAFDPSEIEKYLESGLWQESTGCVRLEDFHKPYIK
SSSKNLSVGLGLNVESLLGVLKLGAKLSSL

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 21221; Mature: 21221

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELILGSQSSARANLLKEHGIKFEQKALYFDEESLKTTDPREFVYLACKGKLEKAKELLA
CCEEECCCCHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCEEEEEECCCHHHHHHHHH
NNCVIVVADSVVSVGNRMQRKAKNKQEALEFLKRQNGNEIEVLTCSALISPVLEWLDLSV
CCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH
FRARLKAFDPSEIEKYLESGLWQESTGCVRLEDFHKPYIKSSSKNLSVGLGLNVESLLGV
HHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEHHHCCHHHCCCCCCEEEEECCCHHHHHHH
LKLGAKLSSL
HHHHHHHCCC
>Mature Secondary Structure
MELILGSQSSARANLLKEHGIKFEQKALYFDEESLKTTDPREFVYLACKGKLEKAKELLA
CCEEECCCCHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCCEEEEEECCCHHHHHHHHH
NNCVIVVADSVVSVGNRMQRKAKNKQEALEFLKRQNGNEIEVLTCSALISPVLEWLDLSV
CCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH
FRARLKAFDPSEIEKYLESGLWQESTGCVRLEDFHKPYIKSSSKNLSVGLGLNVESLLGV
HHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEHHHCCHHHCCCCCCEEEEECCCHHHHHHH
LKLGAKLSSL
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]