Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is crcB [H]

Identifier: 108563592

GI number: 108563592

Start: 1233255

End: 1233647

Strand: Direct

Name: crcB [H]

Synonym: HPAG1_1167

Alternate gene names: 108563592

Gene position: 1233255-1233647 (Clockwise)

Preceding gene: 108563591

Following gene: 108563594

Centisome position: 77.25

GC content: 39.95

Gene sequence:

>393_bases
ATGAATTTTGTCTTTTTATGGGCCGCTTTAGGGGGGGCTATAGGGAGTTCGTTAAGGTATTTTGTGGGCAAAGTGATGCC
CAGTAAATTTTTAATGTTTGAAAGTTTCCCTTTAGGGACTTTTAGCGTGAACCTCATAGGGTGTTTTGTCATCGGCTTTA
TGGGGCATTTGGCCGCTAAAAAAGTTTTTGGCGATGATTTTGGGATTTTCTTTGTCACCGGGGTTTTAGGGGGTTTTACG
ACCTTTTCTTCTTATGGGCTAGACACTTTAAAACTCTTGCAAAAATCCCAATACCTTGAAGCCGTTTCTTATGTCTTAGG
CACTAACCTTTTAGGGCTTATTGGGGTAGCTATTGGTTGGTTTTTGGCTAAAAATTTTGTAGGCGTTAATTAA

Upstream 100 bases:

>100_bases
CCTTAGAAGCGTGTTTAGAACTGGCTTTAAGTTTGAGAATTAAGGAATGTTAAAAACATCTCATTATAATGCTCTCAGTT
ATTTTGTTAAAGGATGACGC

Downstream 100 bases:

>100_bases
AAAACGCTTTTTGGCGTTTTATTAACGCTTGATTAAAGCAGAGCCTACAATCACAACAGCCACAAAGCCATTTCATCGGC
CATGAAAAAATCGCTCGCTA

Product: camphor resistance protein CrcB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNFVFLWAALGGAIGSSLRYFVGKVMPSKFLMFESFPLGTFSVNLIGCFVIGFMGHLAAKKVFGDDFGIFFVTGVLGGFT
TFSSYGLDTLKLLQKSQYLEAVSYVLGTNLLGLIGVAIGWFLAKNFVGVN

Sequences:

>Translated_130_residues
MNFVFLWAALGGAIGSSLRYFVGKVMPSKFLMFESFPLGTFSVNLIGCFVIGFMGHLAAKKVFGDDFGIFFVTGVLGGFT
TFSSYGLDTLKLLQKSQYLEAVSYVLGTNLLGLIGVAIGWFLAKNFVGVN
>Mature_130_residues
MNFVFLWAALGGAIGSSLRYFVGKVMPSKFLMFESFPLGTFSVNLIGCFVIGFMGHLAAKKVFGDDFGIFFVTGVLGGFT
TFSSYGLDTLKLLQKSQYLEAVSYVLGTNLLGLIGVAIGWFLAKNFVGVN

Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem

COG id: COG0239

COG function: function code D; Integral membrane protein possibly involved in chromosome condensation

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CrcB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003691 [H]

Pfam domain/function: PF02537 CRCB [H]

EC number: NA

Molecular weight: Translated: 14036; Mature: 14036

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFVFLWAALGGAIGSSLRYFVGKVMPSKFLMFESFPLGTFSVNLIGCFVIGFMGHLAAK
CCEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KVFGDDFGIFFVTGVLGGFTTFSSYGLDTLKLLQKSQYLEAVSYVLGTNLLGLIGVAIGW
HHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLAKNFVGVN
HHHHHHCCCC
>Mature Secondary Structure
MNFVFLWAALGGAIGSSLRYFVGKVMPSKFLMFESFPLGTFSVNLIGCFVIGFMGHLAAK
CCEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KVFGDDFGIFFVTGVLGGFTTFSSYGLDTLKLLQKSQYLEAVSYVLGTNLLGLIGVAIGW
HHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLAKNFVGVN
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA