Click here to switch to the map view.

The map label for this gene is 108563582

Identifier: 108563582

GI number: 108563582

Start: 1224410

End: 1224889

Strand: Reverse

Name: 108563582

Synonym: HPAG1_1157

Alternate gene names: NA

Gene position: 1224889-1224410 (Counterclockwise)

Preceding gene: 108563583

Following gene: 108563581

Centisome position: 76.73

GC content: 36.04

Gene sequence:

>480_bases
ATGCGCTCTCCAAATTTAGAAAAAGAAGAAACTGAAATCATAGAAACACTTCTTATGCGTGAAAAAATGCGTTTATGCCC
CTTGTATTGGCGCATCTTAGCGTTTTTAACCGATGGTTTGTTGGTAGCGTTTTTATTGAGCGATCTTTTAGGGGCGTGCG
ATTTTTTGCATTCTTTATATTGGCTAGCTAACCCCATTTATCACAGCGTGTTTGTCATAGTGAGTTTTATCATCTTGTAT
GGCGTTTATGAAATCTTTTTTGTGTGTTTGTGCAAGATGAGTTTGGCTAAACTGGTTTTTAGGATTAAAATTATTGATAT
TTATTTAGCGGATTGCCCCAGTAGGGCTATTTTATTGAAGCGTTTAGGGTTAAAGATCGTGGTTTTTCTATGCCCCTTTT
TATGGTTTGTAGTATTTAAAAACCCCTATCATAGGGCGTGGCATGAAGAAAAAAGCAAAAGTCTTTTGGTGTTGTTTTAA

Upstream 100 bases:

>100_bases
TTATCGCAAGGATATTGGTTTTAAGGTGTTAGATTTGAAAGAATATTCTTAAAGGTTAAAGTTTAAGACAAACCAAAGAG
TTTGTCTTGTTTGTTTTTGA

Downstream 100 bases:

>100_bases
TCATGATTTATTGGTTGTATTTGGCGGTCTTTTTTTTGTTGAGCGCATTGGAGGCTAAAGAAATCGCTATGCAACGATTT
GACAAACAAAACCATAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MRSPNLEKEETEIIETLLMREKMRLCPLYWRILAFLTDGLLVAFLLSDLLGACDFLHSLYWLANPIYHSVFVIVSFIILY
GVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLKRLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLF

Sequences:

>Translated_159_residues
MRSPNLEKEETEIIETLLMREKMRLCPLYWRILAFLTDGLLVAFLLSDLLGACDFLHSLYWLANPIYHSVFVIVSFIILY
GVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLKRLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLF
>Mature_159_residues
MRSPNLEKEETEIIETLLMREKMRLCPLYWRILAFLTDGLLVAFLLSDLLGACDFLHSLYWLANPIYHSVFVIVSFIILY
GVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLKRLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLF

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18757; Mature: 18757

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPNLEKEETEIIETLLMREKMRLCPLYWRILAFLTDGLLVAFLLSDLLGACDFLHSLY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLANPIYHSVFVIVSFIILYGVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLF
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MRSPNLEKEETEIIETLLMREKMRLCPLYWRILAFLTDGLLVAFLLSDLLGACDFLHSLY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLANPIYHSVFVIVSFIILYGVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLF
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA