Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

Click here to switch to the map view.

The map label for this gene is 108563580

Identifier: 108563580

GI number: 108563580

Start: 1221427

End: 1222137

Strand: Reverse

Name: 108563580

Synonym: HPAG1_1155

Alternate gene names: NA

Gene position: 1222137-1221427 (Counterclockwise)

Preceding gene: 108563581

Following gene: 108563579

Centisome position: 76.56

GC content: 38.12

Gene sequence:

>711_bases
ATGCATTTGAATACGGATTTTAGCCATATCACCGATATAGAGGGCATGCGTTTTATCAATGAAGAAGACGCTTTGAACAA
ATTGATTAATGAAATCCACACGCGCCACATTGATTTAAAAGATTCCATCATGCTCGCTTTGAGTTTTAACGCTCTGTATT
TAGCTCACGCTTTAGCACAAAAATTTGGAGCGACTTATGATATACTTTTTTTAGAACCTATCCTAGCCCCTTTAAACTCA
AAATGCGAGATCGCTTTAGTGAGTGAGAGCATGGATATAGTGATGAATGAAAGCTTGATCAATTCCTTTGACATCACTTT
AGACTATGTTTATGGGGAAGCCAAGCGAGCTTATGAAGAAGACATTTTGTCTCACATCTATCAGTATCGCAAAGGCAATG
CGATCAAAAGCTTAAAAGATAAAAATATTTTTATCGTAGATAGGGGGATTGAAACCGGGTTTAGAGCAGGGTTAGGCGTG
CAAACTTGCTTGAAAAAAGAATGCCAAGACATTTATATTTTAACCCCCATTCTCGCGCAAAATGTCGCTCAAGGCTTAGA
AAGTTTGTGCGATGGGGTGATTAGCGTGTATCGCCCTGAATGTTTTGTCTCTGTGGAGCATCATTATAAAGAACTCAAGC
GATTAAGCAATGAAGAAATTGAAAAATACTTGGGCGCTAACAACGCGCCTAATTTAAAAAAGGAACATTAA

Upstream 100 bases:

>100_bases
GGGTGTTTGAAAATAACTATGTTAAGCTAGAATTAGACTTTTCACCGATCACTAAAACCAATGTAACTTACCGCTCTTTA
CAGCGTAAGTAAGAAAAGGA

Downstream 100 bases:

>100_bases
ATATGGATTTTATCACCATCAATTCTAGTAACAAAACCGAAGAGTTCGCTCTCAAACAAGTGGTCAAACAAGCCACCAGC
TCTCTTTTATACCGCTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Na+/H+ Antiporter; Phosphoglycerate Dehydrogenase; Phosphoribosyl Transferase Domain Protein

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MHLNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLAHALAQKFGATYDILFLEPILAPLNS
KCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEEDILSHIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGV
QTCLKKECQDIYILTPILAQNVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH

Sequences:

>Translated_236_residues
MHLNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLAHALAQKFGATYDILFLEPILAPLNS
KCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEEDILSHIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGV
QTCLKKECQDIYILTPILAQNVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH
>Mature_236_residues
MHLNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLAHALAQKFGATYDILFLEPILAPLNS
KCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEEDILSHIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGV
QTCLKKECQDIYILTPILAQNVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH

Specific function: Unknown

COG id: COG1926

COG function: function code R; Predicted phosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26872; Mature: 26872

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLAHALAQ
CCCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHHHHHHHHHH
KFGATYDILFLEPILAPLNSKCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEE
HHCCCEEHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHH
DILSHIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGVQTCLKKECQDIYILTPILAQ
HHHHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHCCCCHHHHHHHHHCCEEEEHHHHHH
NVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH
HHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHLNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLAHALAQ
CCCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHHHHHHHHHH
KFGATYDILFLEPILAPLNSKCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEE
HHCCCEEHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHH
DILSHIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGVQTCLKKECQDIYILTPILAQ
HHHHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHCCCCHHHHHHHHHCCEEEEHHHHHH
NVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH
HHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA