Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is 108563580
Identifier: 108563580
GI number: 108563580
Start: 1221427
End: 1222137
Strand: Reverse
Name: 108563580
Synonym: HPAG1_1155
Alternate gene names: NA
Gene position: 1222137-1221427 (Counterclockwise)
Preceding gene: 108563581
Following gene: 108563579
Centisome position: 76.56
GC content: 38.12
Gene sequence:
>711_bases ATGCATTTGAATACGGATTTTAGCCATATCACCGATATAGAGGGCATGCGTTTTATCAATGAAGAAGACGCTTTGAACAA ATTGATTAATGAAATCCACACGCGCCACATTGATTTAAAAGATTCCATCATGCTCGCTTTGAGTTTTAACGCTCTGTATT TAGCTCACGCTTTAGCACAAAAATTTGGAGCGACTTATGATATACTTTTTTTAGAACCTATCCTAGCCCCTTTAAACTCA AAATGCGAGATCGCTTTAGTGAGTGAGAGCATGGATATAGTGATGAATGAAAGCTTGATCAATTCCTTTGACATCACTTT AGACTATGTTTATGGGGAAGCCAAGCGAGCTTATGAAGAAGACATTTTGTCTCACATCTATCAGTATCGCAAAGGCAATG CGATCAAAAGCTTAAAAGATAAAAATATTTTTATCGTAGATAGGGGGATTGAAACCGGGTTTAGAGCAGGGTTAGGCGTG CAAACTTGCTTGAAAAAAGAATGCCAAGACATTTATATTTTAACCCCCATTCTCGCGCAAAATGTCGCTCAAGGCTTAGA AAGTTTGTGCGATGGGGTGATTAGCGTGTATCGCCCTGAATGTTTTGTCTCTGTGGAGCATCATTATAAAGAACTCAAGC GATTAAGCAATGAAGAAATTGAAAAATACTTGGGCGCTAACAACGCGCCTAATTTAAAAAAGGAACATTAA
Upstream 100 bases:
>100_bases GGGTGTTTGAAAATAACTATGTTAAGCTAGAATTAGACTTTTCACCGATCACTAAAACCAATGTAACTTACCGCTCTTTA CAGCGTAAGTAAGAAAAGGA
Downstream 100 bases:
>100_bases ATATGGATTTTATCACCATCAATTCTAGTAACAAAACCGAAGAGTTCGCTCTCAAACAAGTGGTCAAACAAGCCACCAGC TCTCTTTTATACCGCTTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Na+/H+ Antiporter; Phosphoglycerate Dehydrogenase; Phosphoribosyl Transferase Domain Protein
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MHLNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLAHALAQKFGATYDILFLEPILAPLNS KCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEEDILSHIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGV QTCLKKECQDIYILTPILAQNVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH
Sequences:
>Translated_236_residues MHLNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLAHALAQKFGATYDILFLEPILAPLNS KCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEEDILSHIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGV QTCLKKECQDIYILTPILAQNVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH >Mature_236_residues MHLNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLAHALAQKFGATYDILFLEPILAPLNS KCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEEDILSHIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGV QTCLKKECQDIYILTPILAQNVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26872; Mature: 26872
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLAHALAQ CCCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHHHHHHHHHH KFGATYDILFLEPILAPLNSKCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEE HHCCCEEHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHH DILSHIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGVQTCLKKECQDIYILTPILAQ HHHHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHCCCCHHHHHHHHHCCEEEEHHHHHH NVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH HHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MHLNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLAHALAQ CCCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHHHHHHHHHH KFGATYDILFLEPILAPLNSKCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEE HHCCCEEHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHH DILSHIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGVQTCLKKECQDIYILTPILAQ HHHHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHCCCCHHHHHHHHHCCEEEEHHHHHH NVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH HHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA