Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563553

Identifier: 108563553

GI number: 108563553

Start: 1188900

End: 1190063

Strand: Reverse

Name: 108563553

Synonym: HPAG1_1128

Alternate gene names: NA

Gene position: 1190063-1188900 (Counterclockwise)

Preceding gene: 108563554

Following gene: 108563552

Centisome position: 74.55

GC content: 33.51

Gene sequence:

>1164_bases
ATGCCTGTTATAAGAGTTTTAGTAATGCTTGCAACAATGATGATGAAATTAGTGAAAACGGCAAAAGAAAAGAAAGTTTT
TAAGAATGTGGGAATATCTATAATGGGGATTGCTTTTTGGGAAGCGATAAAAGACTCGATAAAAAAACAAATTAAAAAAA
GCGATTGGATATGTGGGAATGTTAAGACTGCGGATGATTATTTAAAAACGCATCCTAACTCATGGTTTAATTCAGCAATA
GGTGTAGCAACGATAACAACCATGCTTATGAATGTGTGTTTTGCTGATGACCAATCCAAAAAAGAAGTGGCTGAAACTCA
AAAGGAAGCTGAAAACGCTAGGGATAGAGCGAACAAGAGTGGGATAGAACTCGCTAATAGTCAAATAAAAGCAGAACAGG
AACAACAAAAGACAAGCAATATAGAGACTAATAATCAAATAAAAGTAGAACAAGAACAACAAAAGACAGAACAAGAAAAA
CAAAAGACAGAACAAGAAAAACAAAAGACAAGCAATATAGAGACTAACAATCAAATAAAAGTAGAACAAGAACAACAAAA
GACAGAACAAGAAAAACAAAAGACAAACAATACGCAAAAAGATCTCATTAAAAAAGCAGAACAAAATTGCCAAGAAAATC
ATAATCAATTTTTTATTAAAAAAGTAGGAATTAAGGGTGGTATTGCTATAGAAGTAGAAGCTGAATGCAAAACCCCTAAA
CCTGCAAAAACCAATCAAACCCCTATCCAGCCAAAACATCTCCCAAACTCTAAACAACCCCGCTCTCAAAGAGGATCAAA
AACGCAAGAGCTTATCGCTTATTTGCAAAAAGAGCTAGAATCTCTGCCCTATTCGCAAAAAGCTATCGCTAAACAAGTGG
ATTTTTATAAACCAAGTTCTATCGCTTATTTAGAACTAGATCCTAGAGATTTTAATGTTACCGAAGAATGGCAAAACGAA
AATCTAAAAATACGCTCTAAAGCTCAAGCTAAAATGCTTGAAATGAGGGATTTAAAACCAGACCTACAAGCCCACCTTCC
AATCTCTCAAAGCCTTTTGTTCGTTCAAAAAATATTTGCTGATATTAATAAAGAAATAAAAATAGTTGCTAATACTGAAA
AGAAAGCAGAAAAAGCGAGTTATGGTTATAGTAAAAGGATGTAG

Upstream 100 bases:

>100_bases
ACAATTTTTCAAACCAATCGTTTAATAGCGATTAAATATGACTATATATACTACAATAATAAGATTTTGATGGGTAAGAT
TGTTTTTTGAAAGGATTTAA

Downstream 100 bases:

>100_bases
GCATAAGAAAATAAGAACACCATAAAATCGTTCTTATATTCTAGGAGACATCAATCAATTTCTTGCCGTAGAAAAATCGC
TTATTAGCTTGCTCCCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MPVIRVLVMLATMMMKLVKTAKEKKVFKNVGISIMGIAFWEAIKDSIKKQIKKSDWICGNVKTADDYLKTHPNSWFNSAI
GVATITTMLMNVCFADDQSKKEVAETQKEAENARDRANKSGIELANSQIKAEQEQQKTSNIETNNQIKVEQEQQKTEQEK
QKTEQEKQKTSNIETNNQIKVEQEQQKTEQEKQKTNNTQKDLIKKAEQNCQENHNQFFIKKVGIKGGIAIEVEAECKTPK
PAKTNQTPIQPKHLPNSKQPRSQRGSKTQELIAYLQKELESLPYSQKAIAKQVDFYKPSSIAYLELDPRDFNVTEEWQNE
NLKIRSKAQAKMLEMRDLKPDLQAHLPISQSLLFVQKIFADINKEIKIVANTEKKAEKASYGYSKRM

Sequences:

>Translated_387_residues
MPVIRVLVMLATMMMKLVKTAKEKKVFKNVGISIMGIAFWEAIKDSIKKQIKKSDWICGNVKTADDYLKTHPNSWFNSAI
GVATITTMLMNVCFADDQSKKEVAETQKEAENARDRANKSGIELANSQIKAEQEQQKTSNIETNNQIKVEQEQQKTEQEK
QKTEQEKQKTSNIETNNQIKVEQEQQKTEQEKQKTNNTQKDLIKKAEQNCQENHNQFFIKKVGIKGGIAIEVEAECKTPK
PAKTNQTPIQPKHLPNSKQPRSQRGSKTQELIAYLQKELESLPYSQKAIAKQVDFYKPSSIAYLELDPRDFNVTEEWQNE
NLKIRSKAQAKMLEMRDLKPDLQAHLPISQSLLFVQKIFADINKEIKIVANTEKKAEKASYGYSKRM
>Mature_386_residues
PVIRVLVMLATMMMKLVKTAKEKKVFKNVGISIMGIAFWEAIKDSIKKQIKKSDWICGNVKTADDYLKTHPNSWFNSAIG
VATITTMLMNVCFADDQSKKEVAETQKEAENARDRANKSGIELANSQIKAEQEQQKTSNIETNNQIKVEQEQQKTEQEKQ
KTEQEKQKTSNIETNNQIKVEQEQQKTEQEKQKTNNTQKDLIKKAEQNCQENHNQFFIKKVGIKGGIAIEVEAECKTPKP
AKTNQTPIQPKHLPNSKQPRSQRGSKTQELIAYLQKELESLPYSQKAIAKQVDFYKPSSIAYLELDPRDFNVTEEWQNEN
LKIRSKAQAKMLEMRDLKPDLQAHLPISQSLLFVQKIFADINKEIKIVANTEKKAEKASYGYSKRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44393; Mature: 44262

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVIRVLVMLATMMMKLVKTAKEKKVFKNVGISIMGIAFWEAIKDSIKKQIKKSDWICGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VKTADDYLKTHPNSWFNSAIGVATITTMLMNVCFADDQSKKEVAETQKEAENARDRANKS
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
GIELANSQIKAEQEQQKTSNIETNNQIKVEQEQQKTEQEKQKTEQEKQKTSNIETNNQIK
HHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
VEQEQQKTEQEKQKTNNTQKDLIKKAEQNCQENHNQFFIKKVGIKGGIAIEVEAECKTPK
ECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCC
PAKTNQTPIQPKHLPNSKQPRSQRGSKTQELIAYLQKELESLPYSQKAIAKQVDFYKPSS
CCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
IAYLELDPRDFNVTEEWQNENLKIRSKAQAKMLEMRDLKPDLQAHLPISQSLLFVQKIFA
EEEEEECCCCCCCCHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHH
DINKEIKIVANTEKKAEKASYGYSKRM
HCCCCEEEEECCHHHHHHHHCCHHCCC
>Mature Secondary Structure 
PVIRVLVMLATMMMKLVKTAKEKKVFKNVGISIMGIAFWEAIKDSIKKQIKKSDWICGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VKTADDYLKTHPNSWFNSAIGVATITTMLMNVCFADDQSKKEVAETQKEAENARDRANKS
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
GIELANSQIKAEQEQQKTSNIETNNQIKVEQEQQKTEQEKQKTEQEKQKTSNIETNNQIK
HHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
VEQEQQKTEQEKQKTNNTQKDLIKKAEQNCQENHNQFFIKKVGIKGGIAIEVEAECKTPK
ECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCC
PAKTNQTPIQPKHLPNSKQPRSQRGSKTQELIAYLQKELESLPYSQKAIAKQVDFYKPSS
CCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
IAYLELDPRDFNVTEEWQNENLKIRSKAQAKMLEMRDLKPDLQAHLPISQSLLFVQKIFA
EEEEEECCCCCCCCHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHH
DINKEIKIVANTEKKAEKASYGYSKRM
HCCCCEEEEECCHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA