Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563508

Identifier: 108563508

GI number: 108563508

Start: 1137948

End: 1138142

Strand: Reverse

Name: 108563508

Synonym: HPAG1_1083

Alternate gene names: NA

Gene position: 1138142-1137948 (Counterclockwise)

Preceding gene: 108563509

Following gene: 108563506

Centisome position: 71.3

GC content: 29.23

Gene sequence:

>195_bases
TTGTTTAGATTTATTGCTTCTTGTTGTTTAATGTTTAATGATTTTAATCGCTTGATTTTGTTTTTTACTGCTTATGGCTT
TTGTTGTTTTGCTTTGTTTTTCTTGTGTTTGAGTTTTGTTTTTGGTGTTTTTGGTAGGTCTGAGCTGATTATGAATGCGT
TTGGATTTGAAAACTCTGTTCTTATCAAGTATTGA

Upstream 100 bases:

>100_bases
TTGTTTGTTTTTTTACTGCTTATGGTTTTTGCTTGTTTTTTAATGTTTAATGTGTTTAGTTTGTTTGTATTGGATTTAGC
GTTGAGCTTTCTTAATTCTT

Downstream 100 bases:

>100_bases
TGTTTAAAACCTTATTTTTATAGCTTTAAGTTTTATAATTATAGTGAAATTCATGAGAAAATGGGGGGTTATTTTTGATT
TTTTAACGCCCTGTATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MFRFIASCCLMFNDFNRLILFFTAYGFCCFALFFLCLSFVFGVFGRSELIMNAFGFENSVLIKY

Sequences:

>Translated_64_residues
MFRFIASCCLMFNDFNRLILFFTAYGFCCFALFFLCLSFVFGVFGRSELIMNAFGFENSVLIKY
>Mature_64_residues
MFRFIASCCLMFNDFNRLILFFTAYGFCCFALFFLCLSFVFGVFGRSELIMNAFGFENSVLIKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7505; Mature: 7505

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
12.5 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
12.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRFIASCCLMFNDFNRLILFFTAYGFCCFALFFLCLSFVFGVFGRSELIMNAFGFENSV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCE
LIKY
EEEC
>Mature Secondary Structure
MFRFIASCCLMFNDFNRLILFFTAYGFCCFALFFLCLSFVFGVFGRSELIMNAFGFENSV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCE
LIKY
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA