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The map label for this gene is 108563488

Identifier: 108563488

GI number: 108563488

Start: 1119563

End: 1120558

Strand: Reverse

Name: 108563488

Synonym: HPAG1_1063

Alternate gene names: NA

Gene position: 1120558-1119563 (Counterclockwise)

Preceding gene: 108563489

Following gene: 108563487

Centisome position: 70.19

GC content: 37.55

Gene sequence:

>996_bases
ATGAAAAGGCTTTTTTTTATCCCTTTTATCGCTCCTTTTTTTCTCAATGGGGAACCTTCAGCGTTTGATTTGCAAAGCGG
AGCCACCAAAAAAGAACTCAAGCAGTTGCAAGTCAATAGTAAGAATTTTTCTAATATTTTGACCAAAATCCATTCGCAAG
TAGAGGCTAACACTCAAGCTCAAGAGGGTTTGAGAAGCGTTTATGAGGGGCAGGCTAATAAGATTAAAGATCTCAATAAC
GCTATCCTTTCCCAAGAAGAATCCTTGCGATCCTTAAAAGCCTCTCAAGAAGTGCAAGCTAACACATTAAAGCAGCAATC
GCAAACTTTAGAGGATTTGAGGAATGAGATTCACGCTAACCAGCAAGCTATCCAGCAGTTAGACAAGCAAAATAAAGAAA
TGAGTGAATTATTGACCAAGTTAAGCCAAGATTTGGTTTCGCAAATCGCCTTAATCCAAAAAGCCCTCAAAGAACAAGAG
GAAAAAGCTGAAAAGCCGCTCAAACCAAGTACTCCGACCAATAAAAACCCCTCTTTAAAAGCCGAAGCCTCAAAAAATCA
AGAGAAAAAAACCCAAGAAAAGGCGAAAGTTGAGTTTGATAAAGATTTGTCCAAGCAAAAAGAGATTTTTCAAGAAGCTC
TGTCTTTTTTTAGAAACAAATCCTATGCAGAAGCTAAAGAGCGTTTGTTGTGGTTAGAAGCCAATAGTTACAGACTTTAT
TATGTGCGTTATGTGCTTGGAGAAGTGGCTTATGGAGAAAAGAGATATAGAGAAGCGATCAAGTATTACAAAGAGAGCGC
TCTTTTAAACAAAAAAGCGTCTTACATGCCTGTGCTTTTGTGGCATACGGCATGGTCGTTTAAAAAAATCAAAGACGATC
AAAACTATTATAAATTTTTAAACACTTTGCAACACTTGTATCCTTCAAACGAACAAGCTAAAATGGCGCAAAAAATCTTA
GAAAACAAGGAGAAACACCACCATGCAAAACCATGA

Upstream 100 bases:

>100_bases
ATCAGTTTTGGTGAAACCAAACCCAAATGCACCCAAAAAACTAGAGAATGTTACAAAGAAAACAGAAGAGTGGATGTCAA
ATTAGTGAAGTAATTCTAGG

Downstream 100 bases:

>100_bases
TTTAGAGTCAATCAAACAAGCCGCTTTGATTGAATATGAAGTGAGAGAACAAGGCTCTAGCGTTGTGCTAGACAGCAACA
TTTCTAAAGAGCCTTTAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Periplasmic Protein; Tetratricopeptide TPR_2 Repeat Protein; ADP-Heptose-LPS Heptosyltransferase II; Tetratricopeptide TPR_2 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKRLFFIPFIAPFFLNGEPSAFDLQSGATKKELKQLQVNSKNFSNILTKIHSQVEANTQAQEGLRSVYEGQANKIKDLNN
AILSQEESLRSLKASQEVQANTLKQQSQTLEDLRNEIHANQQAIQQLDKQNKEMSELLTKLSQDLVSQIALIQKALKEQE
EKAEKPLKPSTPTNKNPSLKAEASKNQEKKTQEKAKVEFDKDLSKQKEIFQEALSFFRNKSYAEAKERLLWLEANSYRLY
YVRYVLGEVAYGEKRYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNYYKFLNTLQHLYPSNEQAKMAQKIL
ENKEKHHHAKP

Sequences:

>Translated_331_residues
MKRLFFIPFIAPFFLNGEPSAFDLQSGATKKELKQLQVNSKNFSNILTKIHSQVEANTQAQEGLRSVYEGQANKIKDLNN
AILSQEESLRSLKASQEVQANTLKQQSQTLEDLRNEIHANQQAIQQLDKQNKEMSELLTKLSQDLVSQIALIQKALKEQE
EKAEKPLKPSTPTNKNPSLKAEASKNQEKKTQEKAKVEFDKDLSKQKEIFQEALSFFRNKSYAEAKERLLWLEANSYRLY
YVRYVLGEVAYGEKRYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNYYKFLNTLQHLYPSNEQAKMAQKIL
ENKEKHHHAKP
>Mature_331_residues
MKRLFFIPFIAPFFLNGEPSAFDLQSGATKKELKQLQVNSKNFSNILTKIHSQVEANTQAQEGLRSVYEGQANKIKDLNN
AILSQEESLRSLKASQEVQANTLKQQSQTLEDLRNEIHANQQAIQQLDKQNKEMSELLTKLSQDLVSQIALIQKALKEQE
EKAEKPLKPSTPTNKNPSLKAEASKNQEKKTQEKAKVEFDKDLSKQKEIFQEALSFFRNKSYAEAKERLLWLEANSYRLY
YVRYVLGEVAYGEKRYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNYYKFLNTLQHLYPSNEQAKMAQKIL
ENKEKHHHAKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38522; Mature: 38522

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFFIPFIAPFFLNGEPSAFDLQSGATKKELKQLQVNSKNFSNILTKIHSQVEANTQA
CCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHH
QEGLRSVYEGQANKIKDLNNAILSQEESLRSLKASQEVQANTLKQQSQTLEDLRNEIHAN
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QQAIQQLDKQNKEMSELLTKLSQDLVSQIALIQKALKEQEEKAEKPLKPSTPTNKNPSLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AEASKNQEKKTQEKAKVEFDKDLSKQKEIFQEALSFFRNKSYAEAKERLLWLEANSYRLY
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCEEHH
YVRYVLGEVAYGEKRYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNYYKFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
NTLQHLYPSNEQAKMAQKILENKEKHHHAKP
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRLFFIPFIAPFFLNGEPSAFDLQSGATKKELKQLQVNSKNFSNILTKIHSQVEANTQA
CCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHH
QEGLRSVYEGQANKIKDLNNAILSQEESLRSLKASQEVQANTLKQQSQTLEDLRNEIHAN
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QQAIQQLDKQNKEMSELLTKLSQDLVSQIALIQKALKEQEEKAEKPLKPSTPTNKNPSLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AEASKNQEKKTQEKAKVEFDKDLSKQKEIFQEALSFFRNKSYAEAKERLLWLEANSYRLY
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCEEHH
YVRYVLGEVAYGEKRYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNYYKFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
NTLQHLYPSNEQAKMAQKILENKEKHHHAKP
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA