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The map label for this gene is flgE [H]

Identifier: 108563315

GI number: 108563315

Start: 925088

End: 926905

Strand: Direct

Name: flgE [H]

Synonym: HPAG1_0890

Alternate gene names: 108563315

Gene position: 925088-926905 (Clockwise)

Preceding gene: 108563314

Following gene: 108563316

Centisome position: 57.95

GC content: 42.79

Gene sequence:

>1818_bases
ATGAACGACACCTTATTAAACGCTTATAGCGGGATTAAGACCCACCAGTTTGGTATTGACAGCCTTTCAAACAACATCGC
CAATGTCAATACTTTAGGCTATCGCTCCAATGATCCGGAGTTTAAGACCCTATTTTCTTCGCATTTAGACGCTTTGAACG
CCAAATCCGTTGTGGCTAACGACCGAAATTACGGCGTTACAGGATCAGGCAATGTCCTTTCTAATAAAGACGGGGAATAC
ATGCCAAGCGAGGGGGAATTTCATATGGCGTATCAAGGCAAGGGTTGGTTTGTGATAGGGCCCAATAAAAATGGGGAAAT
GACCATTAATAAAGACGGCTTTAGCAAAAAACAGGATAATTTTCTCACGCGTGCCGGCAATTTCGCGCGAGACGCTGATG
GCTATTTGGTAACCCCTGAGGGCTATTATGTCTATGGCATTGATTTGAAAAAAATCAAAGACGGCACGCTCAATTCCACC
GCCAGAGATGAAGACATTGAAAAATTGCATGGCAACACCCTTTCGCCCTTACAAATCCCCCAAGATTTGACTTACCAGCC
CGTGCTTAGCACGAAAGTGGGTATTAGCGTGAATTTGAACCCTAAAGACCATTTAAAAGGCGTGCAAGATTTTTTCTTAA
ACGATAAGGGCGAAATCATTAAAGAGCGTTTTTTAAACCAGGACATTAACGCTTTGGCGAATGACGATAACGAGCCCATA
GACGCAATCACTAATCGCAAATTAAACATCAGTATCCAAAAAGAAAATGGCAAAAAAGAGGATTTTGTTTTCACTTATGG
GGACGCTGAAAAAGGCGAAAACCAGTTCAAAACTTTAGGCGATTTGCAAAAACTCCTTAAAGAAAAAACCGGGCTAGACT
TAAACCTCATCAAAAGCGAAAAAGACGCCAAAAGCCCCCCCCTTTTATTAGAGATCGCTAATCCTAGCGAAACGCCTATC
ACCTTTAGCTTGAGTGGGGGCATTGCGGATAAATTGGGCTTGAAAGCGGACGGAATGGAACTAAAAAAGGGCATTAGCAG
GGATTCAGTAGCGATTAAAATCCCTTATTATAGCACAGAAGTGGATATTTATGACAAAGCTGGGGATAAATACTTGCTCC
AAAGCGAATATTACATGACCAATTCCAACGATCCCACATCAAGCCCCACGAGCAAAAGGAAAAACCAAACTTGGGAAGTG
AAAAGCTACATCGCAGATCCCAAAAACAAAACCCCTATCAATGATCCTACTTGGGAAATTGTCGGCTTTGATTCAGCCAC
GCATAAAATGAAATCCGCCCCCATGACTTTGGATTTTAAGGGTAATAAGCTCACCTATTCACTAGATAAGAGCGAAAACC
ATGATTCTAGCGATTTGTCTTACCAAGACTCTAAACTTTTAGAAGCGAGTCAAGACGGCAAGCCTAGGGGTATTTTTAGA
GACATGCGCATTGAAGAAAATGGCGTGATTTCTCTAGCTTTTAGTAACGGGGTGGTAGAGCCGGTCGCTCGCATCGGTAT
TTTAGCTTTCACTAACGATCAAGGCTTGAGAAAAATCGGCGGTAACCTCTATGAAATGCAAGAAGGCACCATTAATGGCG
AAAACAGACCCCTAAGCGGTAACCCCATTTTAGGGTGGGACGAAGAGGGCAAGCTCAAGTTTGGGAAAATCAGGCATAAA
TATTTAGAAACGAGCAACGTGAATGCTGGGAACGCCCTAACCAATCTCATTTTAATGCAAAGAGGCTATTCTATGAACGC
TAGGGCCTTTGGCGCGGGCGATGACATGATTAAAGAAGCTATTAGCTTGAAAAAATAA

Upstream 100 bases:

>100_bases
AAAAACCCATTGATCAAAAACCGCTTGAACAAAAGCCCCAAAAACTCTCTGATCAAAAACCTCTTGATCAAAAACCCCAA
ACCTCCCCTAAAGAGACAGC

Downstream 100 bases:

>100_bases
GGGGCTAAAATAAGGAGTATGGTAAAATATCCTTTTCAATAAGGATATTTAATGATACCCACACAGCTTAATGAAATTGC
AGAATTTTTAAAAACAAACC

Product: flagellar hook protein FlgE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 605

Protein sequence:

>605_residues
MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVANDRNYGVTGSGNVLSNKDGEY
MPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDNFLTRAGNFARDADGYLVTPEGYYVYGIDLKKIKDGTLNST
ARDEDIEKLHGNTLSPLQIPQDLTYQPVLSTKVGISVNLNPKDHLKGVQDFFLNDKGEIIKERFLNQDINALANDDNEPI
DAITNRKLNISIQKENGKKEDFVFTYGDAEKGENQFKTLGDLQKLLKEKTGLDLNLIKSEKDAKSPPLLLEIANPSETPI
TFSLSGGIADKLGLKADGMELKKGISRDSVAIKIPYYSTEVDIYDKAGDKYLLQSEYYMTNSNDPTSSPTSKRKNQTWEV
KSYIADPKNKTPINDPTWEIVGFDSATHKMKSAPMTLDFKGNKLTYSLDKSENHDSSDLSYQDSKLLEASQDGKPRGIFR
DMRIEENGVISLAFSNGVVEPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRHK
YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK

Sequences:

>Translated_605_residues
MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVANDRNYGVTGSGNVLSNKDGEY
MPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDNFLTRAGNFARDADGYLVTPEGYYVYGIDLKKIKDGTLNST
ARDEDIEKLHGNTLSPLQIPQDLTYQPVLSTKVGISVNLNPKDHLKGVQDFFLNDKGEIIKERFLNQDINALANDDNEPI
DAITNRKLNISIQKENGKKEDFVFTYGDAEKGENQFKTLGDLQKLLKEKTGLDLNLIKSEKDAKSPPLLLEIANPSETPI
TFSLSGGIADKLGLKADGMELKKGISRDSVAIKIPYYSTEVDIYDKAGDKYLLQSEYYMTNSNDPTSSPTSKRKNQTWEV
KSYIADPKNKTPINDPTWEIVGFDSATHKMKSAPMTLDFKGNKLTYSLDKSENHDSSDLSYQDSKLLEASQDGKPRGIFR
DMRIEENGVISLAFSNGVVEPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRHK
YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK
>Mature_605_residues
MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVANDRNYGVTGSGNVLSNKDGEY
MPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDNFLTRAGNFARDADGYLVTPEGYYVYGIDLKKIKDGTLNST
ARDEDIEKLHGNTLSPLQIPQDLTYQPVLSTKVGISVNLNPKDHLKGVQDFFLNDKGEIIKERFLNQDINALANDDNEPI
DAITNRKLNISIQKENGKKEDFVFTYGDAEKGENQFKTLGDLQKLLKEKTGLDLNLIKSEKDAKSPPLLLEIANPSETPI
TFSLSGGIADKLGLKADGMELKKGISRDSVAIKIPYYSTEVDIYDKAGDKYLLQSEYYMTNSNDPTSSPTSKRKNQTWEV
KSYIADPKNKTPINDPTWEIVGFDSATHKMKSAPMTLDFKGNKLTYSLDKSENHDSSDLSYQDSKLLEASQDGKPRGIFR
DMRIEENGVISLAFSNGVVEPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSGNPILGWDEEGKLKFGKIRHK
YLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEAISLKK

Specific function: Unknown

COG id: COG1749

COG function: function code N; Flagellar hook protein FlgE

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR011491
- InterPro:   IPR001444
- InterPro:   IPR020013
- InterPro:   IPR010810
- InterPro:   IPR012835 [H]

Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF07196 Flagellin_IN; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 67085; Mature: 67085

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN
CCCCHHHHHCCCEEEECCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEC
DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN
CCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCEEECCCCCCCCCCC
FLTRAGNFARDADGYLVTPEGYYVYGIDLKKIKDGTLNSTARDEDIEKLHGNTLSPLQIP
HHHHCCCCCCCCCCEEECCCCEEEEEEEHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
QDLTYQPVLSTKVGISVNLNPKDHLKGVQDFFLNDKGEIIKERFLNQDINALANDDNEPI
CCCCCCCEECEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCCH
DAITNRKLNISIQKENGKKEDFVFTYGDAEKGENQFKTLGDLQKLLKEKTGLDLNLIKSE
HHHCCCEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
KDAKSPPLLLEIANPSETPITFSLSGGIADKLGLKADGMELKKGISRDSVAIKIPYYSTE
CCCCCCCEEEEECCCCCCCEEEEECCCCHHHCCCCCCCHHHHHCCCCCCEEEEECEEECE
VDIYDKAGDKYLLQSEYYMTNSNDPTSSPTSKRKNQTWEVKSYIADPKNKTPINDPTWEI
EEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHCCCCEEEHHHHCCCCCCCCCCCCCEEE
VGFDSATHKMKSAPMTLDFKGNKLTYSLDKSENHDSSDLSYQDSKLLEASQDGKPRGIFR
EECCHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEE
DMRIEENGVISLAFSNGVVEPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSG
ECEECCCCEEEEEECCCCHHHHHHEEEEEEECCCCHHHHCCCEEEECCCCCCCCCCCCCC
NPILGWDEEGKLKFGKIRHKYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEA
CCEECCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
ISLKK
HHCCC
>Mature Secondary Structure
MNDTLLNAYSGIKTHQFGIDSLSNNIANVNTLGYRSNDPEFKTLFSSHLDALNAKSVVAN
CCCCHHHHHCCCEEEECCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEC
DRNYGVTGSGNVLSNKDGEYMPSEGEFHMAYQGKGWFVIGPNKNGEMTINKDGFSKKQDN
CCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCEEECCCCCCCCCCC
FLTRAGNFARDADGYLVTPEGYYVYGIDLKKIKDGTLNSTARDEDIEKLHGNTLSPLQIP
HHHHCCCCCCCCCCEEECCCCEEEEEEEHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
QDLTYQPVLSTKVGISVNLNPKDHLKGVQDFFLNDKGEIIKERFLNQDINALANDDNEPI
CCCCCCCEECEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCCH
DAITNRKLNISIQKENGKKEDFVFTYGDAEKGENQFKTLGDLQKLLKEKTGLDLNLIKSE
HHHCCCEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
KDAKSPPLLLEIANPSETPITFSLSGGIADKLGLKADGMELKKGISRDSVAIKIPYYSTE
CCCCCCCEEEEECCCCCCCEEEEECCCCHHHCCCCCCCHHHHHCCCCCCEEEEECEEECE
VDIYDKAGDKYLLQSEYYMTNSNDPTSSPTSKRKNQTWEVKSYIADPKNKTPINDPTWEI
EEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHCCCCEEEHHHHCCCCCCCCCCCCCEEE
VGFDSATHKMKSAPMTLDFKGNKLTYSLDKSENHDSSDLSYQDSKLLEASQDGKPRGIFR
EECCHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEE
DMRIEENGVISLAFSNGVVEPVARIGILAFTNDQGLRKIGGNLYEMQEGTINGENRPLSG
ECEECCCCEEEEEECCCCHHHHHHEEEEEEECCCCHHHHCCCEEEECCCCCCCCCCCCCC
NPILGWDEEGKLKFGKIRHKYLETSNVNAGNALTNLILMQRGYSMNARAFGAGDDMIKEA
CCEECCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
ISLKK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]