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The map label for this gene is flgD [C]

Identifier: 108563314

GI number: 108563314

Start: 924108

End: 925091

Strand: Direct

Name: flgD [C]

Synonym: HPAG1_0889

Alternate gene names: 108563314

Gene position: 924108-925091 (Clockwise)

Preceding gene: 108563313

Following gene: 108563315

Centisome position: 57.89

GC content: 41.26

Gene sequence:

>984_bases
ATGGCCATTGATTTAGCAGAAGTTACAGGAGCTAAAGCCGCGCAAGAAAGGAAAAAAGAGCAGCCCACCATCGCTAATGG
GTTGGATAAAAACGCTTTCATGAAACTCTTTTTAGAGCAATTGAAAAATCAAGACCCCACCGCTCCTATGGAAACGGATA
AAATCATCACCCAAACCGCGCAGCTCACGCAAGTGGAAATGCAAGAAGAAAACAAAAAAACCATGCAAGAAGTCGCCAGT
GCCATGAAATCCAATAAAGAAACTAACGAGTCTTTAAAAGACTTTCAAGGCGCTTTAAAAGACACCATGGAAAACCTTAA
TAAGGGCATGGACGATAGCCTGAAGGCTAATAACGCTTTAAGGGAAGTAAGTGCGCTTAATTCTGTGAGCATGATAGGCA
AAATCGCTGAAACCGATGTGAGCGGGGCGAATTTTGACGGCAATAACAAGCTTTCTTTTTCGCTCTTTTTTGATGAAAAA
ATTGACGCTTCTAAAGGAGTGCCAGCGATTCAAATCCTGAATGAAAACAATGAATTAGTCAAAACGATTTCCTTAAAAGA
TTATAACGGGCAAAAGGGGTATATTAATTTTGAATGGGACGGCACAAACGAAAAGGGCGAAAAAGTCCCTAAAGGCAATT
ACAAAATCAAGGCTGAATACAATTTAGACTCTCAAAGCAAGCAGTATTTGCAAACGCGCATTGGTAGGGGCGAAGTGGAA
AGCGTGGTTTTTGATAAAGGCAAGCCCATGCTGAGAATGGGCGAAATGATTTTACCCATAGACAGCGCGATAGAGTTTTA
CAAACCGGATCAAAAACCCCTTGAACAAAAACCCCTTGAACAAAAACCGCTTGAACAAAAGCCCCAAAAACTCTCTGATC
AAAAACCCATTGATCAAAAACCGCTTGAACAAAAGCCCCAAAAACTCTCTGATCAAAAACCTCTTGATCAAAAACCCCAA
ACCTCCCCTAAAGAGACAGCATGA

Upstream 100 bases:

>100_bases
CAGACCATGAAAACCAAGAAACGAGCATGCAAATCACTCTTTATGCGTGATTTTAAGCAAGTTTGCTCTATAATAAGACA
TCTTTAATAAGGAAGAGATC

Downstream 100 bases:

>100_bases
ACGACACCTTATTAAACGCTTATAGCGGGATTAAGACCCACCAGTTTGGTATTGACAGCCTTTCAAACAACATCGCCAAT
GTCAATACTTTAGGCTATCG

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: Flagellar Hook Capping Protein; Flagellar Biosynthesis Protein; Flagellar-Hook Assembly Protein FlgD; Flagellar Hook Assembly Protein

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVAS
AMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEK
IDASKGVPAIQILNENNELVKTISLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVE
SVVFDKGKPMLRMGEMILPIDSAIEFYKPDQKPLEQKPLEQKPLEQKPQKLSDQKPIDQKPLEQKPQKLSDQKPLDQKPQ
TSPKETA

Sequences:

>Translated_327_residues
MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVAS
AMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEK
IDASKGVPAIQILNENNELVKTISLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVE
SVVFDKGKPMLRMGEMILPIDSAIEFYKPDQKPLEQKPLEQKPLEQKPQKLSDQKPIDQKPLEQKPQKLSDQKPLDQKPQ
TSPKETA
>Mature_326_residues
AIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVASA
MKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKI
DASKGVPAIQILNENNELVKTISLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVES
VVFDKGKPMLRMGEMILPIDSAIEFYKPDQKPLEQKPLEQKPLEQKPQKLSDQKPIDQKPLEQKPQKLSDQKPLDQKPQT
SPKETA

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36733; Mature: 36602

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTA
CCCCCHHHHCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
QLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNAL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
REVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCEE
KTISLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVE
EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHH
SVVFDKGKPMLRMGEMILPIDSAIEFYKPDQKPLEQKPLEQKPLEQKPQKLSDQKPIDQK
HHHHCCCCCHHHHCCCCCCHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCC
PLEQKPQKLSDQKPLDQKPQTSPKETA
CHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTA
CCCCHHHHCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
QLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNAL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
REVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCEE
KTISLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVE
EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHH
SVVFDKGKPMLRMGEMILPIDSAIEFYKPDQKPLEQKPLEQKPLEQKPQKLSDQKPIDQK
HHHHCCCCCHHHHCCCCCCHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCC
PLEQKPQKLSDQKPLDQKPQTSPKETA
CHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA