Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563306

Identifier: 108563306

GI number: 108563306

Start: 919128

End: 919316

Strand: Direct

Name: 108563306

Synonym: HPAG1_0881

Alternate gene names: NA

Gene position: 919128-919316 (Clockwise)

Preceding gene: 108563302

Following gene: 108563313

Centisome position: 57.58

GC content: 31.22

Gene sequence:

>189_bases
TTGGCTGATTTTTTAGATCAGAAATCCGCCTATCCTACCTTATCGTTGCTGTCGTCTTTATTCTTTAAAACTAACCTAAT
GATCCTCCATATGATGATTAATAAAATGATGGTTAAAAGCAAACCAAACATTGATAAAAACGGCTTTCATCATTTGATTT
TCCTTATTTTTTACTCAAAGACAATCTGA

Upstream 100 bases:

>100_bases
TTCTTTTCGTTGTTCGCTCATGCTTTTCCTTTCTTTTAAAATTTTCGTATCGTAGCGCGCTTAATTAAACGACTATGATT
TAACCACTTCTTTTATCTTC

Downstream 100 bases:

>100_bases
TAACGCTATTTTCTAAAGCGTCCAAACGATGCGAAACTTGGGCTTCTAGGCTGATTAACGCTCCCTTAGGCATTTCTATT
TTTTTATCTCCCACTTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MADFLDQKSAYPTLSLLSSLFFKTNLMILHMMINKMMVKSKPNIDKNGFHHLIFLIFYSKTI

Sequences:

>Translated_62_residues
MADFLDQKSAYPTLSLLSSLFFKTNLMILHMMINKMMVKSKPNIDKNGFHHLIFLIFYSKTI
>Mature_61_residues
ADFLDQKSAYPTLSLLSSLFFKTNLMILHMMINKMMVKSKPNIDKNGFHHLIFLIFYSKTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7269; Mature: 7138

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
9.7 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFLDQKSAYPTLSLLSSLFFKTNLMILHMMINKMMVKSKPNIDKNGFHHLIFLIFYSK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
TI
CC
>Mature Secondary Structure 
ADFLDQKSAYPTLSLLSSLFFKTNLMILHMMINKMMVKSKPNIDKNGFHHLIFLIFYSK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
TI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA