Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is engA [H]
Identifier: 108563245
GI number: 108563245
Start: 854113
End: 855498
Strand: Direct
Name: engA [H]
Synonym: HPAG1_0820
Alternate gene names: 108563245
Gene position: 854113-855498 (Clockwise)
Preceding gene: 108563237
Following gene: 108563246
Centisome position: 53.5
GC content: 39.97
Gene sequence:
>1386_bases ATGAATACAAGCCATAAAACTTTAAAAACCATTGCGATTTTAGGCCAGCCTAATGTGGGGAAAAGCTCGCTATTTAACCG CTTAGCTAGAGAAAGGATCGCTATCACTTCAGATTTTGCAGGCACTACACGAGACATTAACAAACGAAAAATCGCATTGA ATGGCTATGAAGTGGAATTATTAGATACAGGGGGCATGGCTAAAGACGCCCTTTTGTCTAAAGAAATCAAAGCCCTTAAT TTAAAAGCCGCTCAAATGAGCGATTTGATTTTATACGTTGTGGATGGCAAGTCTATCCCTAGCGATGAAGACATCAAGCT TTTTAGAGAGGTTTTTAAGATCAACCCTAACTGCTTTTTAGTGATCAATAAAATTGATAACGACAAAGAAAAAGAGCGAG CTTATGCGTTTTCTTCTTTTGGCATGCCAAAGAGTTTTAATATCTCCGTTTCGCACAATAGAGGCATTAGCGCGTTAATT GATGCGGTATTGAGTGCGCTGAATTTAAACAAAATCATAGAGCAAGATTTGGATGCGGATATTTTAGAAAGCTTAGAAAA TAACGCATTAGAAGAAGAAACTAAAGAAGAAGAGATCATTCAAGTAGGCATCATTGGGAGGGTGAATGTGGGCAAAAGCT CGCTCTTAAACGCGCTCACGAAAAAAGAAAGGAGTCTTGTTTCTAGCGTGGCTGGCACGACCATTGACCCCATAGATGAA ACCATTCTCATAGGCGATCAAAAAATCTGCTTTGTGGATACCGCTGGCATCAGGCATAGGAGTAAAATTTTAGGCATTGA AAAATACGCGCTAGAACGCACGCAAAAAGCCTTAGAAAAATCCCACATCGCGCTTTTAGTTTTAGACGTGAGCGCTCCTT TTGTGGAATTAGACGAAAAGATCAGCTCCTTAGCGGATAAACACTCTTTAGGGATCATTCTTATTTTAAACAAATGGGAC ATCCGCTACGCCCCTTATGAAGAAATCATGGAAACCTTAAAAAGGAAATTCCGCTTTTTAGAATACGCCCCCGTGATCAC AACCAGCTGCTTAAAAGCACGCCATATAGATGAAATCAAGCATAAAATCATAGAAGTCTATGAGTGTTTTTCCAAACGCA TTCCCACGAGCTTGCTCAATAGCGTGATTTCTCAAGCCACCCAAAAACACCCCTTGCCAAGCGATGGAGGGAAATTAGTG AAAGTGTATTACGCCACGCAATTTGCCACCAAACCCCCTCAAATCTCTCTTATCATGAATCGCCCTAAAGCCTTGCATTT CAGTTACAAACGCTATTTGATCAACACCTTAAGGAAAGAATTTAATTTTTTAGGCACGCCTTTAATCCTTAACGCTAAAG ATAAAAAAAGCGCTCAACAGAATTAA
Upstream 100 bases:
>100_bases GCCTATTTTTTTGACTAAAAACAACGCTAGACCCTTATTTAAGCTTTAAATAACTATAATATTGTAATCTAATTTTGATT AAATTGAAGCGATAAAAAAG
Downstream 100 bases:
>100_bases ATTTTTTATGCGTTAAACCCCCTTAAAAAAGCGTTTTTGCTTGATTTATCTTTAGGATTTGATTATAATTACCGCTCAAT CAGTCAAGCTAGGCGATTAA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MNTSHKTLKTIAILGQPNVGKSSLFNRLARERIAITSDFAGTTRDINKRKIALNGYEVELLDTGGMAKDALLSKEIKALN LKAAQMSDLILYVVDGKSIPSDEDIKLFREVFKINPNCFLVINKIDNDKEKERAYAFSSFGMPKSFNISVSHNRGISALI DAVLSALNLNKIIEQDLDADILESLENNALEEETKEEEIIQVGIIGRVNVGKSSLLNALTKKERSLVSSVAGTTIDPIDE TILIGDQKICFVDTAGIRHRSKILGIEKYALERTQKALEKSHIALLVLDVSAPFVELDEKISSLADKHSLGIILILNKWD IRYAPYEEIMETLKRKFRFLEYAPVITTSCLKARHIDEIKHKIIEVYECFSKRIPTSLLNSVISQATQKHPLPSDGGKLV KVYYATQFATKPPQISLIMNRPKALHFSYKRYLINTLRKEFNFLGTPLILNAKDKKSAQQN
Sequences:
>Translated_461_residues MNTSHKTLKTIAILGQPNVGKSSLFNRLARERIAITSDFAGTTRDINKRKIALNGYEVELLDTGGMAKDALLSKEIKALN LKAAQMSDLILYVVDGKSIPSDEDIKLFREVFKINPNCFLVINKIDNDKEKERAYAFSSFGMPKSFNISVSHNRGISALI DAVLSALNLNKIIEQDLDADILESLENNALEEETKEEEIIQVGIIGRVNVGKSSLLNALTKKERSLVSSVAGTTIDPIDE TILIGDQKICFVDTAGIRHRSKILGIEKYALERTQKALEKSHIALLVLDVSAPFVELDEKISSLADKHSLGIILILNKWD IRYAPYEEIMETLKRKFRFLEYAPVITTSCLKARHIDEIKHKIIEVYECFSKRIPTSLLNSVISQATQKHPLPSDGGKLV KVYYATQFATKPPQISLIMNRPKALHFSYKRYLINTLRKEFNFLGTPLILNAKDKKSAQQN >Mature_461_residues MNTSHKTLKTIAILGQPNVGKSSLFNRLARERIAITSDFAGTTRDINKRKIALNGYEVELLDTGGMAKDALLSKEIKALN LKAAQMSDLILYVVDGKSIPSDEDIKLFREVFKINPNCFLVINKIDNDKEKERAYAFSSFGMPKSFNISVSHNRGISALI DAVLSALNLNKIIEQDLDADILESLENNALEEETKEEEIIQVGIIGRVNVGKSSLLNALTKKERSLVSSVAGTTIDPIDE TILIGDQKICFVDTAGIRHRSKILGIEKYALERTQKALEKSHIALLVLDVSAPFVELDEKISSLADKHSLGIILILNKWD IRYAPYEEIMETLKRKFRFLEYAPVITTSCLKARHIDEIKHKIIEVYECFSKRIPTSLLNSVISQATQKHPLPSDGGKLV KVYYATQFATKPPQISLIMNRPKALHFSYKRYLINTLRKEFNFLGTPLILNAKDKKSAQQN
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=469, Percent_Identity=31.7697228144989, Blast_Score=224, Evalue=1e-59, Organism=Escherichia coli, GI2367268, Length=159, Percent_Identity=36.4779874213836, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323665, Length=271, Percent_Identity=28.4132841328413, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 51744; Mature: 51744
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSHKTLKTIAILGQPNVGKSSLFNRLARERIAITSDFAGTTRDINKRKIALNGYEVEL CCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCEEEEE LDTGGMAKDALLSKEIKALNLKAAQMSDLILYVVDGKSIPSDEDIKLFREVFKINPNCFL EECCCCHHHHHHHHHHHHHCCCHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEE VINKIDNDKEKERAYAFSSFGMPKSFNISVSHNRGISALIDAVLSALNLNKIIEQDLDAD EEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHH ILESLENNALEEETKEEEIIQVGIIGRVNVGKSSLLNALTKKERSLVSSVAGTTIDPIDE HHHHHHCCCHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TILIGDQKICFVDTAGIRHRSKILGIEKYALERTQKALEKSHIALLVLDVSAPFVELDEK EEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHH ISSLADKHSLGIILILNKWDIRYAPYEEIMETLKRKFRFLEYAPVITTSCLKARHIDEIK HHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKIIEVYECFSKRIPTSLLNSVISQATQKHPLPSDGGKLVKVYYATQFATKPPQISLIMN HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEC RPKALHFSYKRYLINTLRKEFNFLGTPLILNAKDKKSAQQN CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC >Mature Secondary Structure MNTSHKTLKTIAILGQPNVGKSSLFNRLARERIAITSDFAGTTRDINKRKIALNGYEVEL CCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCEEEEE LDTGGMAKDALLSKEIKALNLKAAQMSDLILYVVDGKSIPSDEDIKLFREVFKINPNCFL EECCCCHHHHHHHHHHHHHCCCHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEE VINKIDNDKEKERAYAFSSFGMPKSFNISVSHNRGISALIDAVLSALNLNKIIEQDLDAD EEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHH ILESLENNALEEETKEEEIIQVGIIGRVNVGKSSLLNALTKKERSLVSSVAGTTIDPIDE HHHHHHCCCHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TILIGDQKICFVDTAGIRHRSKILGIEKYALERTQKALEKSHIALLVLDVSAPFVELDEK EEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHH ISSLADKHSLGIILILNKWDIRYAPYEEIMETLKRKFRFLEYAPVITTSCLKARHIDEIK HHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKIIEVYECFSKRIPTSLLNSVISQATQKHPLPSDGGKLVKVYYATQFATKPPQISLIMN HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEC RPKALHFSYKRYLINTLRKEFNFLGTPLILNAKDKKSAQQN CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA