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The map label for this gene is nudK [H]

Identifier: 108562906

GI number: 108562906

Start: 498927

End: 499553

Strand: Direct

Name: nudK [H]

Synonym: HPAG1_0481

Alternate gene names: 108562906

Gene position: 498927-499553 (Clockwise)

Preceding gene: 108562905

Following gene: 108562907

Centisome position: 31.25

GC content: 37.0

Gene sequence:

>627_bases
ATGTCTTATTTTAAGAATGCTTTCAACCAAAAATCTTTAGTGGATGATTCCAGTGTGTATTTAGAGCCTTGTTCTAGCTC
TAATTTCATAGAATTAAAACGCATGCATTATAATGAAGAGAATACTAAGAAAACATGGGATATTATTAAGTCTTTAGACA
GCGTGGCGGTTTTACTCTATGAAAAAGAATCCGATTGCTTTGTGATTGTGAAACAATTCCGCCCAGCCATTTATGCACGC
CATTTTCATTTTAAACATGAAATCGACGGATACACTTATGAATTGTGCGCGGGGCTTGTGGATAAAGCTAATAAGAGTTT
AGAAGAAATCGCTTGCGAAGAAGCGCTAGAAGAATGCGGTTATCAAATTAGCCCTAAAAATTTAGAAACCATAGGCCAAT
TTTATAGCGCGACCGGGTTGAGTGGGAGTTTGCAAACGCTCTATTACGCTGAAGTGTGCGCGGATTTGAAAGTTTCAAAG
GGTGGGGGGATTGATGCCGAAAAGATTGAAGTGCTGTTTTTAGAGCGATCAAAAGCTCTTGATTTTATAATGGATTTTCA
ATACGCTAAAACCACCGGCTTGTCTTTAGCCATTTTGTGGCATTTAAAAAAGTTTAAAAATATTTAA

Upstream 100 bases:

>100_bases
TTTTTTTAGAAAAAGCTCAGCATTCTAAGCAAAAATTAGAAGAACTTTTGAAAACCCATTCTTTTGAAAAAAATTCATTT
TATCTTTTAGAGGGTTTTTA

Downstream 100 bases:

>100_bases
AAGGAATTTTATGTTAAGGCTTTTGATAGGACTTCTTTTAATGAGTTTTATAAGCTTGCAATCAGCCTCTTGGCAAGAAC
CCTTAAGAGTGAGTATAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSYFKNAFNQKSLVDDSSVYLEPCSSSNFIELKRMHYNEENTKKTWDIIKSLDSVAVLLYEKESDCFVIVKQFRPAIYAR
HFHFKHEIDGYTYELCAGLVDKANKSLEEIACEEALEECGYQISPKNLETIGQFYSATGLSGSLQTLYYAEVCADLKVSK
GGGIDAEKIEVLFLERSKALDFIMDFQYAKTTGLSLAILWHLKKFKNI

Sequences:

>Translated_208_residues
MSYFKNAFNQKSLVDDSSVYLEPCSSSNFIELKRMHYNEENTKKTWDIIKSLDSVAVLLYEKESDCFVIVKQFRPAIYAR
HFHFKHEIDGYTYELCAGLVDKANKSLEEIACEEALEECGYQISPKNLETIGQFYSATGLSGSLQTLYYAEVCADLKVSK
GGGIDAEKIEVLFLERSKALDFIMDFQYAKTTGLSLAILWHLKKFKNI
>Mature_207_residues
SYFKNAFNQKSLVDDSSVYLEPCSSSNFIELKRMHYNEENTKKTWDIIKSLDSVAVLLYEKESDCFVIVKQFRPAIYARH
FHFKHEIDGYTYELCAGLVDKANKSLEEIACEEALEECGYQISPKNLETIGQFYSATGLSGSLQTLYYAEVCADLKVSKG
GGIDAEKIEVLFLERSKALDFIMDFQYAKTTGLSLAILWHLKKFKNI

Specific function: Catalyzes the hydrolysis of GDP-mannose [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI37594467, Length=203, Percent_Identity=38.423645320197, Blast_Score=148, Evalue=3e-36,
Organism=Escherichia coli, GI1788810, Length=165, Percent_Identity=29.6969696969697, Blast_Score=61, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17558808, Length=145, Percent_Identity=38.6206896551724, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24650557, Length=199, Percent_Identity=40.7035175879397, Blast_Score=126, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 23771; Mature: 23640

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYFKNAFNQKSLVDDSSVYLEPCSSSNFIELKRMHYNEENTKKTWDIIKSLDSVAVLLY
CCHHHHHCCCCCCCCCCCEEEECCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHEEEEEE
EKESDCFVIVKQFRPAIYARHFHFKHEIDGYTYELCAGLVDKANKSLEEIACEEALEECG
ECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YQISPKNLETIGQFYSATGLSGSLQTLYYAEVCADLKVSKGGGIDAEKIEVLFLERSKAL
CEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHEEEEEEECHHHH
DFIMDFQYAKTTGLSLAILWHLKKFKNI
HHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYFKNAFNQKSLVDDSSVYLEPCSSSNFIELKRMHYNEENTKKTWDIIKSLDSVAVLLY
CHHHHHCCCCCCCCCCCEEEECCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHEEEEEE
EKESDCFVIVKQFRPAIYARHFHFKHEIDGYTYELCAGLVDKANKSLEEIACEEALEECG
ECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YQISPKNLETIGQFYSATGLSGSLQTLYYAEVCADLKVSKGGGIDAEKIEVLFLERSKAL
CEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCCCHHHEEEEEEECHHHH
DFIMDFQYAKTTGLSLAILWHLKKFKNI
HHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA