Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562903

Identifier: 108562903

GI number: 108562903

Start: 495766

End: 496758

Strand: Direct

Name: 108562903

Synonym: HPAG1_0478

Alternate gene names: NA

Gene position: 495766-496758 (Clockwise)

Preceding gene: 108562902

Following gene: 108562904

Centisome position: 31.06

GC content: 34.34

Gene sequence:

>993_bases
GTGAATTTAGGGGCTTATTACACGCCCCCTTATTTAGTGGATTGCGCTTACAAGCTTTTAAAAAAGCATGTTGGTATTGA
AGACTACACGCTTTTAGACACTGCATGTGGTAATAAAGAGTTTTTAAAACTCCAACACCCTAAAAAAATAGGAGCGGATA
TTGACCCCAAGTGTGATGCTTTAATAATAAACGCTTTAGCCAATCCTAAAAGAGAAAATTATGGCATTAGCCAAGATGAG
CCTTTAATCATCGTGGGCAATCCCCCCTATAACGATAGAACTTCCTTTATCAAACAAGATATTAAAAATAAAGATTTCAT
TTTTGAGATAGACAACGATTTGAAATCTAGGGATTTAGGGATAAGTTTTTTAAAATCTTTTGCAATTTTAAAGCCGGCGT
TTATTTGCGTGCTACACCCTTTATCTTACCTCATCAAAGAAGCTAATTTTAAGCAATTAAAGCTATTTAAGGATCATTAC
AGGCTTTTAGACGCTTTGGTTGTTTCTTCTAAATCTTTCACTAAAAGTAACGAATTTCCTATTGTGATAGCTTTATATGA
GCGAGGGCGAATGGACTATGCAGGTATTAGGCGTTTTGTTTTTCCAACTGATTGCGATACGACGCTATGCTTAAACGATT
TTGATTATATAGCCAATTATGTGGATAAATACCCTAACGCTAAAAAGGTTGGGGCATGCGTGGGCTATTTTTTCCCTATG
CGAGACATCAACGCTCTTAAACGCAACAAAACTTTTTTAAACGCGCCAAGCGAAAATGCGGTGCGAATCAGTCAAGATAA
ATTGATTTATTACCAATATATCCATTATTTTAAGGAAATCGCCCCTAAAATCCCTTATTATTTTGGTAATTTGGATATTA
TTATTGATCATTTCGCTTTTTTAAAAATTAAAGACGCTTTTTTAAAAGATAAAAGAGCGCGTTTAGAATATTTTAAAAAA
TTGTTTCAAGGACACCCTTGTGAGTTTGATTAG

Upstream 100 bases:

>100_bases
TAGAAGAGCCTTTATCCAAGCGCATGCTAAAGACGTGAAACAACTAGATGTGTAAGGGATTTTAATCGCCACTCCCAAAC
ATTTAAATCAGCGAGAGAGC

Downstream 100 bases:

>100_bases
GATTGATAATAATAAAAAAGTAATTGAGGTTTCTATTCCTTTAACTTCAATTTCAGGCAAAGTGCGTGTGAAAATCAGAC
ATGCCTTTAGCGATTATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNLGAYYTPPYLVDCAYKLLKKHVGIEDYTLLDTACGNKEFLKLQHPKKIGADIDPKCDALIINALANPKRENYGISQDE
PLIIVGNPPYNDRTSFIKQDIKNKDFIFEIDNDLKSRDLGISFLKSFAILKPAFICVLHPLSYLIKEANFKQLKLFKDHY
RLLDALVVSSKSFTKSNEFPIVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPM
RDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAFLKIKDAFLKDKRARLEYFKK
LFQGHPCEFD

Sequences:

>Translated_330_residues
MNLGAYYTPPYLVDCAYKLLKKHVGIEDYTLLDTACGNKEFLKLQHPKKIGADIDPKCDALIINALANPKRENYGISQDE
PLIIVGNPPYNDRTSFIKQDIKNKDFIFEIDNDLKSRDLGISFLKSFAILKPAFICVLHPLSYLIKEANFKQLKLFKDHY
RLLDALVVSSKSFTKSNEFPIVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPM
RDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAFLKIKDAFLKDKRARLEYFKK
LFQGHPCEFD
>Mature_330_residues
MNLGAYYTPPYLVDCAYKLLKKHVGIEDYTLLDTACGNKEFLKLQHPKKIGADIDPKCDALIINALANPKRENYGISQDE
PLIIVGNPPYNDRTSFIKQDIKNKDFIFEIDNDLKSRDLGISFLKSFAILKPAFICVLHPLSYLIKEANFKQLKLFKDHY
RLLDALVVSSKSFTKSNEFPIVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPM
RDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAFLKIKDAFLKDKRARLEYFKK
LFQGHPCEFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38331; Mature: 38331

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLGAYYTPPYLVDCAYKLLKKHVGIEDYTLLDTACGNKEFLKLQHPKKIGADIDPKCDA
CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHEEECCCHHCCCCCCCCCCH
LIINALANPKRENYGISQDEPLIIVGNPPYNDRTSFIKQDIKNKDFIFEIDNDLKSRDLG
HHHHHHCCCCHHCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHH
ISFLKSFAILKPAFICVLHPLSYLIKEANFKQLKLFKDHYRLLDALVVSSKSFTKSNEFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
IVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPM
EEEEEECCCCCCHHHHHEEECCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHCH
RDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAF
HHHHHHHHCCCEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHH
LKIKDAFLKDKRARLEYFKKLFQGHPCEFD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNLGAYYTPPYLVDCAYKLLKKHVGIEDYTLLDTACGNKEFLKLQHPKKIGADIDPKCDA
CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHEEECCCHHCCCCCCCCCCH
LIINALANPKRENYGISQDEPLIIVGNPPYNDRTSFIKQDIKNKDFIFEIDNDLKSRDLG
HHHHHHCCCCHHCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHH
ISFLKSFAILKPAFICVLHPLSYLIKEANFKQLKLFKDHYRLLDALVVSSKSFTKSNEFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
IVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPM
EEEEEECCCCCCHHHHHEEECCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHCH
RDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAF
HHHHHHHHCCCEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHH
LKIKDAFLKDKRARLEYFKKLFQGHPCEFD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA