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The map label for this gene is fliM [H]

Identifier: 108562841

GI number: 108562841

Start: 425697

End: 426761

Strand: Direct

Name: fliM [H]

Synonym: HPAG1_0416

Alternate gene names: 108562841

Gene position: 425697-426761 (Clockwise)

Preceding gene: 108562840

Following gene: 108562842

Centisome position: 26.67

GC content: 40.75

Gene sequence:

>1065_bases
ATGGCTGATATTTTAAGCCAAGAAGAAATTGATGCGCTTTTAGAAGTCGTTGATGAAAATGTGGATATTCAAAATGTCCA
AAAAAAGGATATTATCCCGCAGCGCAGCGTAACCCTCTATGATTTCAAACGCCCTAATCGTGTGAGTAAGGAACAACTGC
GCTCTTTTAGGAGTATCCATGATAAAATGGCTAGGAATCTTTCCAGTCAAGTTTCTTCTATCATGCGTTCTATTGTAGAG
ATCCAGCTCCACAGCGTGGATCAAATGACTTATGGCGAATTTTTGATGAGTTTGCCTAGCCCTACAAGTTTTAATGTCTT
TTCCATGAAGCCTATGGGAGGGACAGGGGTTTTAGAAATCAATCCTAGCATCGCTTTCCCCATGATTGACAGACTATTAG
GTGGTAAGGGGAGCGCGTATGATCAAAACAGGGAGTTTAGCGATATTGAATTGAATTTATTGGATACGATTTTACGCCAA
GTGATGCAAATTTTAAAAGAAGTGTGGTCGCCCGTGGTGGAGATGTTTCCTACCATTGACGCTAAAGAATCCAGCGCGAA
TGTGGTCCAAATCGTCGCTCAAAATGAAATTTCTATCATGGTGGTTTTAGAGATTATCATTGGGCATAGCCGTGGGATGA
TGAATATTTGTTACCCGGTGATTTCCATTGAGAGCATTCTTTCTAAAATGGGGAGTAGGGATTTGATGCTTTCAGAGACG
AACTCCAAAAAGAGCCGTAATAAGGAATTGCAAGCGCTATTGAGTGGGGTGAGCGTGGATATGATCGTGTTTTTGGGCGC
GGTGGAATTGAGTTTGAAAGAAATGTTAGATTTAGATGTGGGGGATACTATCCGGTTGAACAAGATCGCTAATGATGAAG
TGAGCGTGTATGTGCATAAAAAAAAGCGTTATTTAGCGAGCGTGGGGTTTCAAGGGTATAGGAAAACCATTCAAATTAAA
GAAGTGATCTATAGCGAAAAAGAACGCACTAAAGAAATTTTAGAAATGCTAGAAGAACAGCGCAGAGGCAAAGTGGGCGA
TATTATGAAAATAGAAGAAGAGTGA

Upstream 100 bases:

>100_bases
TTGAGCGAGATCAAAGAGATTTTAGGCATCACTGAATCGCGCATTTCTCAAATCATTAAAGAAGTGATTAAAAAGGTGCG
TAAATCCTTAGGAGTGGATC

Downstream 100 bases:

>100_bases
GAAATGCAAGATTTTATTAAAATTTTTATTCAAGAGGTTGTTTCTACTTTAGAAGGGTTAGTGGGTAAGGCTTCAAGCGT
GGGATTAGAAAAAGAAGTTT

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQVSSIMRSIVE
IQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQ
VMQILKEVWSPVVEMFPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDLMLSET
NSKKSRNKELQALLSGVSVDMIVFLGAVELSLKEMLDLDVGDTIRLNKIANDEVSVYVHKKKRYLASVGFQGYRKTIQIK
EVIYSEKERTKEILEMLEEQRRGKVGDIMKIEEE

Sequences:

>Translated_354_residues
MADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQVSSIMRSIVE
IQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQ
VMQILKEVWSPVVEMFPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDLMLSET
NSKKSRNKELQALLSGVSVDMIVFLGAVELSLKEMLDLDVGDTIRLNKIANDEVSVYVHKKKRYLASVGFQGYRKTIQIK
EVIYSEKERTKEILEMLEEQRRGKVGDIMKIEEE
>Mature_353_residues
ADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQVSSIMRSIVEI
QLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQV
MQILKEVWSPVVEMFPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDLMLSETN
SKKSRNKELQALLSGVSVDMIVFLGAVELSLKEMLDLDVGDTIRLNKIANDEVSVYVHKKKRYLASVGFQGYRKTIQIKE
VIYSEKERTKEILEMLEEQRRGKVGDIMKIEEE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=292, Percent_Identity=25, Blast_Score=104, Evalue=8e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 40171; Mature: 40040

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIH
CCCCCCHHHHHHHHHHHHCCCCHHCCHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
DKMARNLSSQVSSIMRSIVEIQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEE
NPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQVMQILKEVWSPVVEMFPTID
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDLMLSET
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECC
NSKKSRNKELQALLSGVSVDMIVFLGAVELSLKEMLDLDVGDTIRLNKIANDEVSVYVHK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEH
KKRYLASVGFQGYRKTIQIKEVIYSEKERTKEILEMLEEQRRGKVGDIMKIEEE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
>Mature Secondary Structure 
ADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIH
CCCCCHHHHHHHHHHHHCCCCHHCCHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
DKMARNLSSQVSSIMRSIVEIQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEE
NPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQVMQILKEVWSPVVEMFPTID
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDLMLSET
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECC
NSKKSRNKELQALLSGVSVDMIVFLGAVELSLKEMLDLDVGDTIRLNKIANDEVSVYVHK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEH
KKRYLASVGFQGYRKTIQIKEVIYSEKERTKEILEMLEEQRRGKVGDIMKIEEE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]