Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is ylxH [H]
Identifier: 108562838
GI number: 108562838
Start: 423756
End: 424640
Strand: Direct
Name: ylxH [H]
Synonym: HPAG1_0413
Alternate gene names: 108562838
Gene position: 423756-424640 (Clockwise)
Preceding gene: 108562837
Following gene: 108562840
Centisome position: 26.55
GC content: 38.76
Gene sequence:
>885_bases ATGAACAATCAAGCGAGCCATTTGGATAATTTTATGAACGCTAAAAATCCCAAAAGTTTTTTTGATAATAAGGGGAATAC CAAATTCATTGCTATCACAAGCGGTAAGGGGGGCGTGGGGAAATCCAACATTAGCGCTAATTTAGCTTATTCTTTATACA AGAAAGGTTATAAGGTAGGGGTGTTTGATGCGGATATTGGTTTAGCGAATTTAGATGTTATTTTTGGGGTGAAAACCCAT AAAAATATCTTGAATGCCTTAAAAGGTGAAGCCAAATTACAAGAAATCATTTGTGAGATTGAACCCGGGCTTTGCTTAAT TCCCGGGGATAGCGGCGAAGAAATTTTAAAATACATTAGCGGCGCAGAAGCTTTAGATCAATTCGTGGATGAAGAGGGGG TTTTAAGCTCTTTGGATTATATTGTGGTTGATACAGGCGCTGGGATTGGAGCTACTACGCAAGCGTTTTTGAATGCGAGC GATTGCGTGGTGATTGTTACCACACCCGATCCTTCAGCGATTACGGATGCGTATGCATGCATTAAAATCAACTCTAAAAA TAAAGATGAATTGTTCCTTATCGCTAACATGGTAGCCCAACCTAAAGAAGGCAGGGCGACTTATGAAAGGCTATTCAAGG TGGCTAAAAACAATATCGCTTCATTAGAATTGCATTACTTAGGAGCGATTGAAAATAGCTCTTTGTTGAAACGCTATGTG AGGGAGCGAAAGATTGTAAGAAAAATAGCCCCTAATGATTTGTTTTCGCAATCCATTGATCAGATAGCGGGTCTTTTGGT TTCTAAATTAGAAACCGGTGCTTTAGAAATACCAAAAGAAGGTTTGAAAAGCTTTTTCAAAAGGCTTTTGAATTATTTGG GGTAG
Upstream 100 bases:
>100_bases CTGTTGGGCAAGAAGTGCCTATGGATTTGAAAGTGGCTACTAATGAGTATTTAGTGGATTGCATGCTAGATGGCTTTAGT AACCCCAATAAGGAACAAGC
Downstream 100 bases:
>100_bases GCTGATGAAAGTTCAAAATTTTATCCATTTTTCTGTTGTGGTAGGGTTTTTTTTGGGGTTAGTGTTTTCGGTGTTGAAAT TCAATGAGCCAGAGAGCATT
Product: ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MNNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKTH KNILNALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDQFVDEEGVLSSLDYIVVDTGAGIGATTQAFLNAS DCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYV RERKIVRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGLKSFFKRLLNYLG
Sequences:
>Translated_294_residues MNNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKTH KNILNALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDQFVDEEGVLSSLDYIVVDTGAGIGATTQAFLNAS DCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYV RERKIVRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGLKSFFKRLLNYLG >Mature_294_residues MNNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKTH KNILNALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDQFVDEEGVLSSLDYIVVDTGAGIGATTQAFLNAS DCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYV RERKIVRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGLKSFFKRLLNYLG
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=161, Percent_Identity=33.5403726708075, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 31961; Mature: 31961
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVG CCCHHHHHHHHHCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEE VFDADIGLANLDVIFGVKTHKNILNALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYIS EEECCCCEEEEEEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHC GAEALDQFVDEEGVLSSLDYIVVDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYAC CHHHHHHHHCCCCHHHHCCEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCHHHCCEEE IKINSKNKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYV EEECCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH RERKIVRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGLKSFFKRLLNYLG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVG CCCHHHHHHHHHCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEE VFDADIGLANLDVIFGVKTHKNILNALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYIS EEECCCCEEEEEEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHC GAEALDQFVDEEGVLSSLDYIVVDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYAC CHHHHHHHHCCCCHHHHCCEEEEECCCCCCHHHHHHCCCCCEEEEEECCCCCHHHCCEEE IKINSKNKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYV EEECCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH RERKIVRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGLKSFFKRLLNYLG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]