Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
---|---|
Accession | NC_008086 |
Length | 1,596,366 |
Click here to switch to the map view.
The map label for this gene is folK [H]
Identifier: 108562836
GI number: 108562836
Start: 421895
End: 422386
Strand: Direct
Name: folK [H]
Synonym: HPAG1_0411
Alternate gene names: 108562836
Gene position: 421895-422386 (Clockwise)
Preceding gene: 108562835
Following gene: 108562837
Centisome position: 26.43
GC content: 34.15
Gene sequence:
>492_bases GTGATGCGAGAGATCCTTACTAACCGCTTTTTCCCCAGCCTTTTTAAAAAAAGGCTTGATTTTTCTAACAGGGTGGTTTT AGGGTTGGGATCTAATCTTAAAAATCCTTTAAAAATATTAAAAAATTGTTTTTTGTATTTTAAAAATCATAGTAAAATTG GGAAAATTTTTTCTTCGCCCATTTATATCAATCCTCCTTTTGGTTACACTAATCAACCTAACTTTTATAACGCTACGATT ATCCTTAAAACATCTTTAAGTTTACGCCATTTTTTTGCTCTGGTTTTTTATATAGAAAGGCGTTTTGGCCGTGCAAGGAA GCGCGATTTTAAAGACGCTCCAAGAACTTTAGATATTGATATTATCGCTTTCAACCAAGTCATTTTAAGGCAGAACGATT TGACTTTACCTCACCCTAAATGGAGTGAAAGGGATTCGGTGTTAATGCCGTTGGCTTTGCAACAAATTCTTTTTAAAAAA GGGGAGTGGTGA
Upstream 100 bases:
>100_bases GCATGGTGTTTTCTGTAGAGCCTGGGATTTATATCCCTGGATTTTTTGGGGTGCGCATTGAAGATTTAGTGGTGATCAAA AATTCTAGGGCTGAGCTTTT
Downstream 100 bases:
>100_bases AATTCTATACCTATAGTGGGGAGACGGCTGCTGAAGCTTTAAAGATCGCTCAAAGCCACCATGGGGTGGATACGCTGGTG TTTAAAACGCAAGAAATCCG
Product: 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MMREILTNRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKNCFLYFKNHSKIGKIFSSPIYINPPFGYTNQPNFYNATI ILKTSLSLRHFFALVFYIERRFGRARKRDFKDAPRTLDIDIIAFNQVILRQNDLTLPHPKWSERDSVLMPLALQQILFKK GEW
Sequences:
>Translated_163_residues MMREILTNRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKNCFLYFKNHSKIGKIFSSPIYINPPFGYTNQPNFYNATI ILKTSLSLRHFFALVFYIERRFGRARKRDFKDAPRTLDIDIIAFNQVILRQNDLTLPHPKWSERDSVLMPLALQQILFKK GEW >Mature_163_residues MMREILTNRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKNCFLYFKNHSKIGKIFSSPIYINPPFGYTNQPNFYNATI ILKTSLSLRHFFALVFYIERRFGRARKRDFKDAPRTLDIDIIAFNQVILRQNDLTLPHPKWSERDSVLMPLALQQILFKK GEW
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=138, Percent_Identity=31.8840579710145, Blast_Score=74, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 19300; Mature: 19300
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: PS00092 N6_MTASE ; PS00794 HPPK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMREILTNRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKNCFLYFKNHSKIGKIFSSP CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCC IYINPPFGYTNQPNFYNATIILKTSLSLRHFFALVFYIERRFGRARKRDFKDAPRTLDID EEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE IIAFNQVILRQNDLTLPHPKWSERDSVLMPLALQQILFKKGEW EEEHHHEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCC >Mature Secondary Structure MMREILTNRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKNCFLYFKNHSKIGKIFSSP CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCC IYINPPFGYTNQPNFYNATIILKTSLSLRHFFALVFYIERRFGRARKRDFKDAPRTLDID EEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE IIAFNQVILRQNDLTLPHPKWSERDSVLMPLALQQILFKKGEW EEEHHHEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]