Click here to switch to the map view.

The map label for this gene is 108562821

Identifier: 108562821

GI number: 108562821

Start: 404990

End: 405463

Strand: Direct

Name: 108562821

Synonym: HPAG1_0396

Alternate gene names: NA

Gene position: 404990-405463 (Clockwise)

Preceding gene: 108562820

Following gene: 108562822

Centisome position: 25.37

GC content: 37.34

Gene sequence:

>474_bases
TTGGAATTGGATTTAGTGCTTATCTCTTTAGGCGAGGGGGTTTTGCTTGGGGTGTATCAAAACAATTTTTTATGCACTTC
TTACACTTCTAAATCAAAAACAAGCGAAGCTTTAGTGGAAGTTTTTTCGCAATTATTTGAAGATTTTAAAAACCCTACTT
TACCGGCGATTAAAGGGGTTTATTACGCTAAAGGGCCAGGGAGTTTCACTAGCCTAAAGCTCACGCATGTTTTCTTACAC
ACTTTGGCTTTAATCCATGACTTTGAACTCTATTCAACCACAGGCTTTGATTTTAACGACAACACGCCCATTTTGGCGTA
TGCCAATAAATACTTTGTTTCAAAAGAAAGGGAAAGCTTAACCGATTTTAAGGATTTGAAAATTGCGCCAAAAGATTTCA
TGCTGCCCTCTTTTTTAGAGAAAGACAAATTCACCCAATTGAACACGCCGTTTTACATTTTGCCTCCTATTTAG

Upstream 100 bases:

>100_bases
AGCGGACGCTAAAAATTACGAAGTTTTAATCGCTACGGATCCGGCTAAAGAGTTTGCGTTGCAAAAGGCTTTCGCTTAAT
CCTGAATTAGGGTTTATTTT

Downstream 100 bases:

>100_bases
TGTATAATGCTAGTTTTAAAAATGAAAGGGTATCAACAATAGGGGTTTAAAATTTGGTAGTGAGTGTTCCTGCAACAAGT
GCGAATTTAGGCCCCGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MELDLVLISLGEGVLLGVYQNNFLCTSYTSKSKTSEALVEVFSQLFEDFKNPTLPAIKGVYYAKGPGSFTSLKLTHVFLH
TLALIHDFELYSTTGFDFNDNTPILAYANKYFVSKERESLTDFKDLKIAPKDFMLPSFLEKDKFTQLNTPFYILPPI

Sequences:

>Translated_157_residues
MELDLVLISLGEGVLLGVYQNNFLCTSYTSKSKTSEALVEVFSQLFEDFKNPTLPAIKGVYYAKGPGSFTSLKLTHVFLH
TLALIHDFELYSTTGFDFNDNTPILAYANKYFVSKERESLTDFKDLKIAPKDFMLPSFLEKDKFTQLNTPFYILPPI
>Mature_157_residues
MELDLVLISLGEGVLLGVYQNNFLCTSYTSKSKTSEALVEVFSQLFEDFKNPTLPAIKGVYYAKGPGSFTSLKLTHVFLH
TLALIHDFELYSTTGFDFNDNTPILAYANKYFVSKERESLTDFKDLKIAPKDFMLPSFLEKDKFTQLNTPFYILPPI

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17830; Mature: 17830

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDLVLISLGEGVLLGVYQNNFLCTSYTSKSKTSEALVEVFSQLFEDFKNPTLPAIKGV
CCEEEEEEECCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCE
YYAKGPGSFTSLKLTHVFLHTLALIHDFELYSTTGFDFNDNTPILAYANKYFVSKERESL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEECCEEEECCCHHHH
TDFKDLKIAPKDFMLPSFLEKDKFTQLNTPFYILPPI
CCHHHCEECCHHCCCHHHHCCCCCEECCCCEEEECCC
>Mature Secondary Structure
MELDLVLISLGEGVLLGVYQNNFLCTSYTSKSKTSEALVEVFSQLFEDFKNPTLPAIKGV
CCEEEEEEECCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCE
YYAKGPGSFTSLKLTHVFLHTLALIHDFELYSTTGFDFNDNTPILAYANKYFVSKERESL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEECCEEEECCCHHHH
TDFKDLKIAPKDFMLPSFLEKDKFTQLNTPFYILPPI
CCHHHCEECCHHCCCHHHHCCCCCEECCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA