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The map label for this gene is 108562789

Identifier: 108562789

GI number: 108562789

Start: 376496

End: 377935

Strand: Direct

Name: 108562789

Synonym: HPAG1_0364

Alternate gene names: NA

Gene position: 376496-377935 (Clockwise)

Preceding gene: 108562788

Following gene: 108562790

Centisome position: 23.58

GC content: 42.22

Gene sequence:

>1440_bases
ATGAAAAATAGCACGCCTTTAAAGAATAAAGTTTTTTGCAGGTTATATGTTTTAAGTTTGAGTGCTTCTTTGCAAGCGTT
TGATTATAAAATTGAAGTTTTAGCGGAGTCCTTTTCTAAAGTTGGCTTTAATAAAAAAAAGATTGACATAGCTAGGGGGA
TTTATCCTACAGAGACTTTTGTAACCGCTGTAGGGCAGGGCAATATCTATGCGGATTTTTTATCCAAAGGCCTTAAAGAT
CAAGGGCATGTTTTAGAGGGAAAAGTCGGTGGCACGCTAGGAGGGGTCGCTTATGATGACACCAAATTCAATCAAGGCGG
ATCGGTTATTTATAACTACATCGGTTATTGGGATGGCTATTTAGGGGGTAAAAGAGCCTTGCTTGATGGCACGAGTATTC
ATGAGTGCACGCTTGGATCTGATGGCAAGGTGATTGATTCTATAGCATGCGGGAACGCTAGGGCTAATAAAATCCGCCGT
AATTATTTGATGAATAACGCTTTTTTAGAATACCGCTATAAAGATATTTTTTTAGCTAAAGGGGGGCGTTATCAATCTAA
TGCTCCTTATATGAGCGGTTACACGCAAGGTTTTGAAATCAGCGCTAAAGTCAAGGATAAAAATGAAGCAAGCCACAAAT
TATGGTGGTTTAGCTCATGGGGTAGGGCGTTCGCTTATGGGGAGTGGATTTATGATTTTTATTCTCCAAGAACCGTGATT
AAAAACGGGCGCACTTTGAATTATGGTATCCATTTAGTGGATTACACTTATGAAAGAAAAGGAATTAGCGTTAGCCCTTT
TTTCCAATTTTCGCCTGGGACTTATTACAGCCCTGGGGTGGTTGTAGGCTATGATAGTAACCCTAATTTTAACGGCGTTG
GCTTTAGATCAGAAACAAAAGCTTATATTTTGCTCCCTGTCCATGCCCCCTTAAGAAGGGATACTTATCGTTACGCTATA
AAGGCTGGCACTGCCGGGCAAAGCTTGATCATTAGGCAACGATTTGATTACAATGAATTTAATTTTGGGGGAGCGTTTTA
TAAAGTGTGGAAAAACGCAAACGCTTACATCGGCACGACAGGAAACCCTTTAGGCATTGATTTTTGGACCAATAGCGTTT
ATGATATAGGGCAAGCCTTAAGCCATGTGGTAACCGCTGATGCCGTCTCTGGATGGGTTTTTGGTGGGGGCGTGCATAAA
AAGTGGCTGTGGGGGACTTTATGGCGTTGGACTAGCGGCACTTTAGCCAATGAAGCGAGCGCGGCTGTTAATGTGGGCTA
TAAGATCAGTAAGAGTTTGACAGCGAGCGTGAAATTAGAATACTTTGGCGTGATGACGCATTCAGGCTTTACGGTGGGGA
GCTACAGACCCACGCCCGGCTCTAAAGCGCTTTATTCAGACAGAAGCCATTTGATGACAACTCTTAGCGCTAAATTCTAA

Upstream 100 bases:

>100_bases
TAAATAGCTTGATTACGCTTCTTTGTTTTTATATTAGTTAAGAATTGTATAGTCTTTAAGTCATAATCTTTAAGATGTAT
TGGCTATTAAAAGGAAAAAA

Downstream 100 bases:

>100_bases
CCAATCGCTTTAAGCTGTTTATTAAAGCGTTAAAAATCCCTTAATAAAAACACTATAATACAAGTTTAATCAAATCCAAA
GGTTAAGCATTTGAAACTCT

Product: outer membrane protein HofB

Products: NA

Alternate protein names: Outer Membrane Protein; Hof Family Outer Membrane Protein; Outer Membrane Protein HofH; Outermembrane Protein HofE; Outer Membrane Protein HofF; Outer Membrane Protein HofA; Outer Membrane Protein HofC; Outer Membrane Protein HofB; Outer Membrane Protein HofD

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MKNSTPLKNKVFCRLYVLSLSASLQAFDYKIEVLAESFSKVGFNKKKIDIARGIYPTETFVTAVGQGNIYADFLSKGLKD
QGHVLEGKVGGTLGGVAYDDTKFNQGGSVIYNYIGYWDGYLGGKRALLDGTSIHECTLGSDGKVIDSIACGNARANKIRR
NYLMNNAFLEYRYKDIFLAKGGRYQSNAPYMSGYTQGFEISAKVKDKNEASHKLWWFSSWGRAFAYGEWIYDFYSPRTVI
KNGRTLNYGIHLVDYTYERKGISVSPFFQFSPGTYYSPGVVVGYDSNPNFNGVGFRSETKAYILLPVHAPLRRDTYRYAI
KAGTAGQSLIIRQRFDYNEFNFGGAFYKVWKNANAYIGTTGNPLGIDFWTNSVYDIGQALSHVVTADAVSGWVFGGGVHK
KWLWGTLWRWTSGTLANEASAAVNVGYKISKSLTASVKLEYFGVMTHSGFTVGSYRPTPGSKALYSDRSHLMTTLSAKF

Sequences:

>Translated_479_residues
MKNSTPLKNKVFCRLYVLSLSASLQAFDYKIEVLAESFSKVGFNKKKIDIARGIYPTETFVTAVGQGNIYADFLSKGLKD
QGHVLEGKVGGTLGGVAYDDTKFNQGGSVIYNYIGYWDGYLGGKRALLDGTSIHECTLGSDGKVIDSIACGNARANKIRR
NYLMNNAFLEYRYKDIFLAKGGRYQSNAPYMSGYTQGFEISAKVKDKNEASHKLWWFSSWGRAFAYGEWIYDFYSPRTVI
KNGRTLNYGIHLVDYTYERKGISVSPFFQFSPGTYYSPGVVVGYDSNPNFNGVGFRSETKAYILLPVHAPLRRDTYRYAI
KAGTAGQSLIIRQRFDYNEFNFGGAFYKVWKNANAYIGTTGNPLGIDFWTNSVYDIGQALSHVVTADAVSGWVFGGGVHK
KWLWGTLWRWTSGTLANEASAAVNVGYKISKSLTASVKLEYFGVMTHSGFTVGSYRPTPGSKALYSDRSHLMTTLSAKF
>Mature_479_residues
MKNSTPLKNKVFCRLYVLSLSASLQAFDYKIEVLAESFSKVGFNKKKIDIARGIYPTETFVTAVGQGNIYADFLSKGLKD
QGHVLEGKVGGTLGGVAYDDTKFNQGGSVIYNYIGYWDGYLGGKRALLDGTSIHECTLGSDGKVIDSIACGNARANKIRR
NYLMNNAFLEYRYKDIFLAKGGRYQSNAPYMSGYTQGFEISAKVKDKNEASHKLWWFSSWGRAFAYGEWIYDFYSPRTVI
KNGRTLNYGIHLVDYTYERKGISVSPFFQFSPGTYYSPGVVVGYDSNPNFNGVGFRSETKAYILLPVHAPLRRDTYRYAI
KAGTAGQSLIIRQRFDYNEFNFGGAFYKVWKNANAYIGTTGNPLGIDFWTNSVYDIGQALSHVVTADAVSGWVFGGGVHK
KWLWGTLWRWTSGTLANEASAAVNVGYKISKSLTASVKLEYFGVMTHSGFTVGSYRPTPGSKALYSDRSHLMTTLSAKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53327; Mature: 53327

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSTPLKNKVFCRLYVLSLSASLQAFDYKIEVLAESFSKVGFNKKKIDIARGIYPTETF
CCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHCCCCCCCHHE
VTAVGQGNIYADFLSKGLKDQGHVLEGKVGGTLGGVAYDDTKFNQGGSVIYNYIGYWDGY
EEEECCCCEEHHHHHCCCCCCCCEEECCCCCEECCEEECCCCCCCCCCEEEEEHHHCCCC
LGGKRALLDGTSIHECTLGSDGKVIDSIACGNARANKIRRNYLMNNAFLEYRYKDIFLAK
CCCCEEEECCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEEEEEC
GGRYQSNAPYMSGYTQGFEISAKVKDKNEASHKLWWFSSWGRAFAYGEWIYDFYSPRTVI
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEHHHHHHHCCCCHHH
KNGRTLNYGIHLVDYTYERKGISVSPFFQFSPGTYYSPGVVVGYDSNPNFNGVGFRSETK
CCCCEEEEEEEEEEEEECCCCCEECCEEEECCCCEECCCEEEEECCCCCCCCCCCCCCCC
AYILLPVHAPLRRDTYRYAIKAGTAGQSLIIRQRFDYNEFNFGGAFYKVWKNANAYIGTT
EEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEECC
GNPLGIDFWTNSVYDIGQALSHVVTADAVSGWVFGGGVHKKWLWGTLWRWTSGTLANEAS
CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHEECCCCCCCCCCC
AAVNVGYKISKSLTASVKLEYFGVMTHSGFTVGSYRPTPGSKALYSDRSHLMTTLSAKF
CEEEECEEECCCEEEEEEEEEEEEEEECCEEECCCCCCCCCCCHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MKNSTPLKNKVFCRLYVLSLSASLQAFDYKIEVLAESFSKVGFNKKKIDIARGIYPTETF
CCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHCCCCCCCHHE
VTAVGQGNIYADFLSKGLKDQGHVLEGKVGGTLGGVAYDDTKFNQGGSVIYNYIGYWDGY
EEEECCCCEEHHHHHCCCCCCCCEEECCCCCEECCEEECCCCCCCCCCEEEEEHHHCCCC
LGGKRALLDGTSIHECTLGSDGKVIDSIACGNARANKIRRNYLMNNAFLEYRYKDIFLAK
CCCCEEEECCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEEEEEC
GGRYQSNAPYMSGYTQGFEISAKVKDKNEASHKLWWFSSWGRAFAYGEWIYDFYSPRTVI
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEHHHHHHHCCCCHHH
KNGRTLNYGIHLVDYTYERKGISVSPFFQFSPGTYYSPGVVVGYDSNPNFNGVGFRSETK
CCCCEEEEEEEEEEEEECCCCCEECCEEEECCCCEECCCEEEEECCCCCCCCCCCCCCCC
AYILLPVHAPLRRDTYRYAIKAGTAGQSLIIRQRFDYNEFNFGGAFYKVWKNANAYIGTT
EEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEECC
GNPLGIDFWTNSVYDIGQALSHVVTADAVSGWVFGGGVHKKWLWGTLWRWTSGTLANEAS
CCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHEECCCCCCCCCCC
AAVNVGYKISKSLTASVKLEYFGVMTHSGFTVGSYRPTPGSKALYSDRSHLMTTLSAKF
CEEEECEEECCCEEEEEEEEEEEEEEECCEEECCCCCCCCCCCHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA