Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is fliG [H]
Identifier: 108562772
GI number: 108562772
Start: 356822
End: 357853
Strand: Direct
Name: fliG [H]
Synonym: HPAG1_0347
Alternate gene names: 108562772
Gene position: 356822-357853 (Clockwise)
Preceding gene: 108562771
Following gene: 108562773
Centisome position: 22.35
GC content: 40.89
Gene sequence:
>1032_bases ATGGCAACCAAGCTTACCCCCAAACAAAAGGCTCAATTAGACGAACTTTCCATGAGTGAAAAAATCGCTATTTTACTCAT TCAAGTGGGCGAAGACACCACAGGTGAGATTTTAAGGCATTTAGACATTGACTCCATTACAGAGATTTCTAAGCAAATCG TGCAATTAAACGGCACAGACAAGCAAATCGGCGCGGCGGTTTTAGAGGAATTTTTTGCGATTTTTCAGTCTAACCAATAC ATCAATACCGGCGGTTTAGAATACGCTAGAGAGCTTTTAACCAGGACTTTAGGGAGCGAAGAAGCCAAAAAAGTGATGGA TAAACTCACTAAAAGCTTGCAAACGCAAAAAAATTTCGCTTATTTAGGCAAAATCAAGCCCCAACAACTCGCTGATTTCA TCATTAACGAACACCCTCAAACCATTGCCTTGATTTTAGCCCACATGGAAGCCCCTAATGCGGCTGAGACTTTGAGCTAT TTCCCTGATGAAATGAAAGCCGAGATCTCCATTAGAATGGCGAATTTAGGCGAAATATCGCCCCAAGTGGTTAAAAGGGT TTCCACGGTGTTAGAAAACAAACTAGAATCGCTCACCAGTTATAAAATTGAAGTGGGTGGTTTAAGAGCGGTGGCTGAAA TCTTTAACCGCTTGGGCCAAAAGAGCGCTAAAACCACGCTCGCTCGTATTGAAAGCGTGGATAACAAACTCGCCGGTGCG ATTAAAGAAATGATGTTCACTTTTGAAGACATTGTGAAATTGGACAATTTCGCTATCAGAGAGATTTTAAAAGTGGCGGA TAAAAAAGATTTGTCTTTAGCTTTAAAAACTTCCACGAAAGATTTAACCGATAAATTCTTAAACAACATGAGCAGTAGGG CTGCAGAGCAGTTTGTAGAAGAAATGCAATATTTAGGGGCAGTCAAAATCAAAGATGTGGATGTGGCTCAAAGGAAAATC ATTGAAATCGTGCAGAGCTTGCAAGAAAAAGGCGTGATCCAAACCGGTGAAGAGGAAGATGTCATTGAATAG
Upstream 100 bases:
>100_bases TTAAAGAACGCCCTGATGAAATCGCCATGCTCTTTAAACTCCTAATCAAAGATGAAATCTCTTCAGACAGCGCGAAAGGC TAAAAGATAAAAGGTTAAAA
Downstream 100 bases:
>100_bases CCGTAAAAACTTGATCCAAAAAGACCATTTGAATAAGCATGACATTCAAAAATACGAATTTAAGAGCATGGCAAACTTAC CCCCTAAAACTAATCCTAAT
Product: flagellar motor switch protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTDKQIGAAVLEEFFAIFQSNQY INTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSY FPDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA IKEMMFTFEDIVKLDNFAIREILKVADKKDLSLALKTSTKDLTDKFLNNMSSRAAEQFVEEMQYLGAVKIKDVDVAQRKI IEIVQSLQEKGVIQTGEEEDVIE
Sequences:
>Translated_343_residues MATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTDKQIGAAVLEEFFAIFQSNQY INTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSY FPDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA IKEMMFTFEDIVKLDNFAIREILKVADKKDLSLALKTSTKDLTDKFLNNMSSRAAEQFVEEMQYLGAVKIKDVDVAQRKI IEIVQSLQEKGVIQTGEEEDVIE >Mature_342_residues ATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTDKQIGAAVLEEFFAIFQSNQYI NTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYF PDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGAI KEMMFTFEDIVKLDNFAIREILKVADKKDLSLALKTSTKDLTDKFLNNMSSRAAEQFVEEMQYLGAVKIKDVDVAQRKII EIVQSLQEKGVIQTGEEEDVIE
Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family [H]
Homologues:
Organism=Escherichia coli, GI1788249, Length=328, Percent_Identity=29.8780487804878, Blast_Score=168, Evalue=6e-43,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 [H]
Pfam domain/function: PF01706 FliG_C [H]
EC number: NA
Molecular weight: Translated: 38327; Mature: 38196
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTD CCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCH KQIGAAVLEEFFAIFQSNQYINTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH YLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYFPDEMKAEISIRMANLGEIS HHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHEEEECCCCCCC PQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IKEMMFTFEDIVKLDNFAIREILKVADKKDLSLALKTSTKDLTDKFLNNMSSRAAEQFVE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH EMQYLGAVKIKDVDVAQRKIIEIVQSLQEKGVIQTGEEEDVIE HHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTD CCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCH KQIGAAVLEEFFAIFQSNQYINTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH YLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYFPDEMKAEISIRMANLGEIS HHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHEEEECCCCCCC PQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IKEMMFTFEDIVKLDNFAIREILKVADKKDLSLALKTSTKDLTDKFLNNMSSRAAEQFVE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH EMQYLGAVKIKDVDVAQRKIIEIVQSLQEKGVIQTGEEEDVIE HHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1828465; 9384377 [H]