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The map label for this gene is flgH [H]

Identifier: 108562753

GI number: 108562753

Start: 340220

End: 340933

Strand: Direct

Name: flgH [H]

Synonym: HPAG1_0328

Alternate gene names: 108562753

Gene position: 340220-340933 (Clockwise)

Preceding gene: 108562751

Following gene: 108562754

Centisome position: 21.31

GC content: 41.18

Gene sequence:

>714_bases
ATGAAAAAAGCGCTTTATTTAGGGGCTGTTGCGTTTAGCGTTGCATTCAACATGGCATCAGCCAATGAGCCAAAAATTGA
TTTTAACCCTCCTAATTATGTAGAAGAAACCCCCTCTAAAGAATTTATCCCTGAATTGAACAAGTTGGGGAGTTTGTTTG
GGCAGGGTGAGCGCCCTTTATTTGCGGACAGGAGGGCGATGAAGCCTAACGATTTGATCACAATCATTGTCTCTGAAAAA
GCGAGCGCGAATTATTCCAGCTCTAAAGATTATAAAAGCGCTTCAGGGGGTAATTCCACGCCTCCAAGACTCACTTATAA
CGGGCTAGATGAAAGAAAGAAACAAGAAGCGCAGTATTTAGACGATAAGAATAATTACAATTTCACCAAATCCAGCAATA
ACACGAATTTTAAAGGCGGCGGCTCGCAAAAAAAGAGCGAAGATTTAGAGATCGTGTTGAGCGCTCGCATCATTAAGGTG
CTAGAAAATGGGAATTATTTCATCTATGGGAATAAGGAAGTGCTAGTGGATGGAGAAAAGCAAATCCTTAAGGTGAGTGG
GGTGATCCGCCCTTATGATATTGAAAGGAATAACACCATCCAATCCAAGTTTTTGGCTGACGCTAAGATTGAATACACGA
ATTTAGGGCATTTGAGCGATTCCAATAAAAAGAAATTCGCTGCTGATGCGATGGAAACCCAAATGCCTTATTAA

Upstream 100 bases:

>100_bases
TAAAGATCTAAATTTTACAACAACTTACTCAAAATTAAGCATTTATTCTTTATAAGAGAGTATAATTCAAGGCTTAAAAT
AACTCAAGTAAGGCTAGTGG

Downstream 100 bases:

>100_bases
TAAAGAGCAAAGCCTAGCATGAGAGCGATCGCTATTGTTTTAGCCAGAAGTTCCAGTAAAAGAATCAAGAATAAAAATAT
TATTGATTTTTTCAATAAAC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKKALYLGAVAFSVAFNMASANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRAMKPNDLITIIVSEK
ASANYSSSKDYKSASGGNSTPPRLTYNGLDERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKV
LENGNYFIYGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY

Sequences:

>Translated_237_residues
MKKALYLGAVAFSVAFNMASANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRAMKPNDLITIIVSEK
ASANYSSSKDYKSASGGNSTPPRLTYNGLDERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKV
LENGNYFIYGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY
>Mature_237_residues
MKKALYLGAVAFSVAFNMASANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRAMKPNDLITIIVSEK
ASANYSSSKDYKSASGGNSTPPRLTYNGLDERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKV
LENGNYFIYGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=175, Percent_Identity=29.1428571428571, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 26495; Mature: 26495

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALYLGAVAFSVAFNMASANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPL
CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
FADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGLDERKKQEAQYL
HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHC
DDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIYGNKEVLVDGEK
CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEECCCH
QILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY
HEEEECCCCCCEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKALYLGAVAFSVAFNMASANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPL
CCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
FADRRAMKPNDLITIIVSEKASANYSSSKDYKSASGGNSTPPRLTYNGLDERKKQEAQYL
HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHC
DDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIYGNKEVLVDGEK
CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEECCCH
QILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY
HEEEECCCCCCEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]