Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is yleA [C]
Identifier: 108562712
GI number: 108562712
Start: 291554
End: 292810
Strand: Direct
Name: yleA [C]
Synonym: HPAG1_0287
Alternate gene names: 108562712
Gene position: 291554-292810 (Clockwise)
Preceding gene: 108562711
Following gene: 108562713
Centisome position: 18.26
GC content: 39.3
Gene sequence:
>1257_bases ATGAAAAAAGTCTATTTCAAAACTTTTGGGTGCAGGACGAATCTTTTTGACACGCAAGTGATGGGTGAGAATTTGAAGGA CTTTAGCGCGACCTTAGAAGAACAAGAAGCCGATATTATTGTGATCAATTCTTGCACCGTGACTAATGGGGCCGATAGCG CGGTAAGGAGTTACGCTAAAAAAATGGTGCGATTAAATAAAGAAGTGTTATTTACTGGCTGCGGGGTGAAAACTCAAGGC AAAGAGCTTTTTGAAAAAGGGTTTTTAAAGGGCGTTTTTGGGCATGACAATAAAGAAAAGATTAACGCGCTTTTACAAGA AAAAAAGCGTTTTTTTATAGATGACAATTTAGAAAACAAGCACTTAGACACCACGATGGTGAGCGAGTTTGTGGGAAAAA CCAGGGCGTTTATCAAGATCCAAGAAGGCTGTGATTTTGATTGCAATTATTGCATTATCCCAAGCGTGAGAGGGAGGGCT AGGAGTTTTGAAGAGAGGAAAATTTTAGAGCAAGTGGGCCTTTTATGCTCTAAAGGGGTTCAAGAAGTGGTTTTAACCGG CACCAATGTGGGGAGCTATGGGAAGGATAGAGGAAGCAATATCGCGCGATTGATTAAAAAATTAAGTCAGATTGCTGGAT TAAAACGCATAAGGATTGGGAGCTTAGAACCTAATCAAATCAACGATGAATTTTTAGAGCTTTTAGAAGAGGATTTTTTA GAAAAACATTTGCATATCGCTTTGCAGCACAGCCATGATTTCATGCTAGAGAGGATGAATAGAAGAAACCGCACTAAAAG CGATAGGGAATTATTAGAGGTAATCGCTTCTAAGAATTTTGCCATCGGCACGGATTTTATTGTAGGGCATCCGGGCGAGA GCGAAAGCGTTTTTGAAAAGGCGTTTAAAAATTTAGAAAGCTTGCCCTTAACGCACATCCACCCTTTTATTTACAGCAAA CGAAAAGACACCCCCTCTAGTTTGATGACTGATAGCGTGAGCTTGGAAGATTCTAAAAAGCGTTTGAATGCGATTAAGGA TTTGATTTTACATAAAAATAAGGCGTTCAGGCAATTGCAACTCAAGCTCAACACGCCTCTAAAAGCTTTAGTGGAAACGC AAAAAGACGGCGAATTTAAAGCCTTAGATCAATTCTTCAACCCCATTAAAATCAAAAGCGATAAGCCTTTAAGGGCCAGT TTTTTAGAAATCAAAGAGTATGAAATTAAGGAGAGAGAAAACCATGCCGTTTTCTAA
Upstream 100 bases:
>100_bases TGAAAGAAGAAAATATCCATATCGCTTATACGACCAGCAAGTTGCTTAAAGTGGATGCTGATTTTTTAGGCGATGGTTTT GGGAATAAAAGGGAACAAAA
Downstream 100 bases:
>100_bases AAATTTAGAAAACCTCACCGCTCCCTTCAAACGCATTAAAAACCGCTCGCTTGTTTTGGCGTTAGGGTTTTTGATCCTTA CTTTTTGCTTGCTTCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKKVYFKTFGCRTNLFDTQVMGENLKDFSATLEEQEADIIVINSCTVTNGADSAVRSYAKKMVRLNKEVLFTGCGVKTQG KELFEKGFLKGVFGHDNKEKINALLQEKKRFFIDDNLENKHLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVRGRA RSFEERKILEQVGLLCSKGVQEVVLTGTNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGSLEPNQINDEFLELLEEDFL EKHLHIALQHSHDFMLERMNRRNRTKSDRELLEVIASKNFAIGTDFIVGHPGESESVFEKAFKNLESLPLTHIHPFIYSK RKDTPSSLMTDSVSLEDSKKRLNAIKDLILHKNKAFRQLQLKLNTPLKALVETQKDGEFKALDQFFNPIKIKSDKPLRAS FLEIKEYEIKERENHAVF
Sequences:
>Translated_418_residues MKKVYFKTFGCRTNLFDTQVMGENLKDFSATLEEQEADIIVINSCTVTNGADSAVRSYAKKMVRLNKEVLFTGCGVKTQG KELFEKGFLKGVFGHDNKEKINALLQEKKRFFIDDNLENKHLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVRGRA RSFEERKILEQVGLLCSKGVQEVVLTGTNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGSLEPNQINDEFLELLEEDFL EKHLHIALQHSHDFMLERMNRRNRTKSDRELLEVIASKNFAIGTDFIVGHPGESESVFEKAFKNLESLPLTHIHPFIYSK RKDTPSSLMTDSVSLEDSKKRLNAIKDLILHKNKAFRQLQLKLNTPLKALVETQKDGEFKALDQFFNPIKIKSDKPLRAS FLEIKEYEIKERENHAVF >Mature_418_residues MKKVYFKTFGCRTNLFDTQVMGENLKDFSATLEEQEADIIVINSCTVTNGADSAVRSYAKKMVRLNKEVLFTGCGVKTQG KELFEKGFLKGVFGHDNKEKINALLQEKKRFFIDDNLENKHLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVRGRA RSFEERKILEQVGLLCSKGVQEVVLTGTNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGSLEPNQINDEFLELLEEDFL EKHLHIALQHSHDFMLERMNRRNRTKSDRELLEVIASKNFAIGTDFIVGHPGESESVFEKAFKNLESLPLTHIHPFIYSK RKDTPSSLMTDSVSLEDSKKRLNAIKDLILHKNKAFRQLQLKLNTPLKALVETQKDGEFKALDQFFNPIKIKSDKPLRAS FLEIKEYEIKERENHAVF
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MTTase N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI93277076, Length=433, Percent_Identity=26.7898383371824, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI28872782, Length=369, Percent_Identity=26.8292682926829, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI28872784, Length=369, Percent_Identity=26.8292682926829, Blast_Score=122, Evalue=7e-28, Organism=Escherichia coli, GI1786882, Length=394, Percent_Identity=28.4263959390863, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1787057, Length=366, Percent_Identity=24.8633879781421, Blast_Score=106, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17553146, Length=410, Percent_Identity=26.3414634146341, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71996771, Length=218, Percent_Identity=26.1467889908257, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI21356207, Length=388, Percent_Identity=28.3505154639175, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI19922432, Length=365, Percent_Identity=26.5753424657534, Blast_Score=112, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 47849; Mature: 47849
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS01305 MOAA_NIFB_PQQE ; PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVYFKTFGCRTNLFDTQVMGENLKDFSATLEEQEADIIVINSCTVTNGADSAVRSYAK CCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHCCCCEEEEECEECCCCCHHHHHHHHH KMVRLNKEVLFTGCGVKTQGKELFEKGFLKGVFGHDNKEKINALLQEKKRFFIDDNLENK HHHHHCHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCCCC HLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVRGRARSFEERKILEQVGLLCSKGV CCHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCH QEVVLTGTNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGSLEPNQINDEFLELLEEDFL HHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEECCCCCCCCCHHHHHHHHHHHH EKHLHIALQHSHDFMLERMNRRNRTKSDRELLEVIASKNFAIGTDFIVGHPGESESVFEK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCEEEECCCCCHHHHHH AFKNLESLPLTHIHPFIYSKRKDTPSSLMTDSVSLEDSKKRLNAIKDLILHKNKAFRQLQ HHHHHHHCCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH LKLNTPLKALVETQKDGEFKALDQFFNPIKIKSDKPLRASFLEIKEYEIKERENHAVF HHHCCCHHHHHHCCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKVYFKTFGCRTNLFDTQVMGENLKDFSATLEEQEADIIVINSCTVTNGADSAVRSYAK CCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHCCCCEEEEECEECCCCCHHHHHHHHH KMVRLNKEVLFTGCGVKTQGKELFEKGFLKGVFGHDNKEKINALLQEKKRFFIDDNLENK HHHHHCHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCCCC HLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVRGRARSFEERKILEQVGLLCSKGV CCHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCH QEVVLTGTNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGSLEPNQINDEFLELLEEDFL HHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEECCCCCCCCCHHHHHHHHHHHH EKHLHIALQHSHDFMLERMNRRNRTKSDRELLEVIASKNFAIGTDFIVGHPGESESVFEK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCEEEECCCCCHHHHHH AFKNLESLPLTHIHPFIYSKRKDTPSSLMTDSVSLEDSKKRLNAIKDLILHKNKAFRQLQ HHHHHHHCCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH LKLNTPLKALVETQKDGEFKALDQFFNPIKIKSDKPLRASFLEIKEYEIKERENHAVF HHHCCCHHHHHHCCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]