Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562698

Identifier: 108562698

GI number: 108562698

Start: 278146

End: 279129

Strand: Direct

Name: 108562698

Synonym: HPAG1_0273

Alternate gene names: NA

Gene position: 278146-279129 (Clockwise)

Preceding gene: 108562697

Following gene: 108562699

Centisome position: 17.42

GC content: 35.57

Gene sequence:

>984_bases
GTGCTTAAAGGGTTAAAAAAAGCGTTCAAAGAGAGGTTTTGCTCTCAAGTGTATATCTCTTTTAATGTGGATCACAATCT
TTTATCCACTCAAGTCATAAGGATCAAAAACGATCGCATTAAAGAGAAATTTTTTAAAACTTTTGAGACTAAAGTGGAGA
CTAAAAATGGTGAAGTCCCCATTCAAGCCTTAAAAATCGCCAGAACTTATAGCCAAAAATACCCCTACACTTATTTTAGC
GCGATGAGTAAAGCTAAAGAGGTTTTATGCGAAAAGCAGGCATTTGAACAAATCAAGCAAGAAAATCAAGATTATCAGGC
TTGTGAAGTCAATCAAAAGTATTGCGTTTATGTGGAATCTAAGGATTTTTTAAAGGATTTCAAGCGTTTTAAAATCCAGG
ATGTGGATTTTTTGTTTTCGCCTTTTAGCCTTATTTATGATTTTGTGCGTGATAATTTAGAAAATAAGCCGTTGTTGTAT
TTGCTTTTGGAGCGTTCAAGATTTTATTTTTTGATTGCGGATAAAAAAGAGATTTTTTTAGCCAAATCCGTGTTTTTAGA
AGAACAACCTGAAGAGTTTATAGAGAGCAAGGAAGAGGATTCTATGGAAATGGATAATGAGGCTGTGAATTTGTTTTTGA
GTGAAATCCAAGAAGATATTGACAGCCTTGAAGAAGCGATAGGCCTAGACAGCAGTAAGGATAATAGCGAAAAAATAACA
GAGGACGCTTATAGTTTGATTGAAGGCATGACAAATATCCCTTTGATTGCAAACGCCTTGCAAGAGGGATTGCGTGGCGT
CTATCATTCTAGAGAGATTGACTTTGTAGAAAAAGTGGTTGTTTTAGACAGCTGTCAAATCCATCAAAAAGCGTTAATGC
ATTTGCAAGAAACTTTGATGATAGAAGTGGATAGGCTTGATTTTTCTTTAGTGGAGCGCTTGAACATTTTAGCGCGCATG
GAGAATGAAAAGCATGCGTTTTAG

Upstream 100 bases:

>100_bases
TCGGTGATCATCCCTAAAGAATGGGAGCTTTCAAAGGCTAAAGAATATTTAAAGACGCGCATGGATTCTGTTGGGTTTGA
AGAACCTCAAAGGGGTTTGG

Downstream 100 bases:

>100_bases
CTACATTGAGCCAAGAGCGAAATACCTTATCAGCAAGCTTTCTAAAATTTGGGTTTTTTACATTTTTTTATCTTTTGTGG
TGATAGGGGGGTTAGTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MLKGLKKAFKERFCSQVYISFNVDHNLLSTQVIRIKNDRIKEKFFKTFETKVETKNGEVPIQALKIARTYSQKYPYTYFS
AMSKAKEVLCEKQAFEQIKQENQDYQACEVNQKYCVYVESKDFLKDFKRFKIQDVDFLFSPFSLIYDFVRDNLENKPLLY
LLLERSRFYFLIADKKEIFLAKSVFLEEQPEEFIESKEEDSMEMDNEAVNLFLSEIQEDIDSLEEAIGLDSSKDNSEKIT
EDAYSLIEGMTNIPLIANALQEGLRGVYHSREIDFVEKVVVLDSCQIHQKALMHLQETLMIEVDRLDFSLVERLNILARM
ENEKHAF

Sequences:

>Translated_327_residues
MLKGLKKAFKERFCSQVYISFNVDHNLLSTQVIRIKNDRIKEKFFKTFETKVETKNGEVPIQALKIARTYSQKYPYTYFS
AMSKAKEVLCEKQAFEQIKQENQDYQACEVNQKYCVYVESKDFLKDFKRFKIQDVDFLFSPFSLIYDFVRDNLENKPLLY
LLLERSRFYFLIADKKEIFLAKSVFLEEQPEEFIESKEEDSMEMDNEAVNLFLSEIQEDIDSLEEAIGLDSSKDNSEKIT
EDAYSLIEGMTNIPLIANALQEGLRGVYHSREIDFVEKVVVLDSCQIHQKALMHLQETLMIEVDRLDFSLVERLNILARM
ENEKHAF
>Mature_327_residues
MLKGLKKAFKERFCSQVYISFNVDHNLLSTQVIRIKNDRIKEKFFKTFETKVETKNGEVPIQALKIARTYSQKYPYTYFS
AMSKAKEVLCEKQAFEQIKQENQDYQACEVNQKYCVYVESKDFLKDFKRFKIQDVDFLFSPFSLIYDFVRDNLENKPLLY
LLLERSRFYFLIADKKEIFLAKSVFLEEQPEEFIESKEEDSMEMDNEAVNLFLSEIQEDIDSLEEAIGLDSSKDNSEKIT
EDAYSLIEGMTNIPLIANALQEGLRGVYHSREIDFVEKVVVLDSCQIHQKALMHLQETLMIEVDRLDFSLVERLNILARM
ENEKHAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38532; Mature: 38532

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGLKKAFKERFCSQVYISFNVDHNLLSTQVIRIKNDRIKEKFFKTFETKVETKNGEVP
CCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHEEECHHHHHHHHHHHHHHHHCCCCCCCH
IQALKIARTYSQKYPYTYFSAMSKAKEVLCEKQAFEQIKQENQDYQACEVNQKYCVYVES
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEECC
KDFLKDFKRFKIQDVDFLFSPFSLIYDFVRDNLENKPLLYLLLERSRFYFLIADKKEIFL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCHHHHH
AKSVFLEEQPEEFIESKEEDSMEMDNEAVNLFLSEIQEDIDSLEEAIGLDSSKDNSEKIT
HHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
EDAYSLIEGMTNIPLIANALQEGLRGVYHSREIDFVEKVVVLDSCQIHQKALMHLQETLM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEVDRLDFSLVERLNILARMENEKHAF
HHHHHCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLKGLKKAFKERFCSQVYISFNVDHNLLSTQVIRIKNDRIKEKFFKTFETKVETKNGEVP
CCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHEEECHHHHHHHHHHHHHHHHCCCCCCCH
IQALKIARTYSQKYPYTYFSAMSKAKEVLCEKQAFEQIKQENQDYQACEVNQKYCVYVES
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEECC
KDFLKDFKRFKIQDVDFLFSPFSLIYDFVRDNLENKPLLYLLLERSRFYFLIADKKEIFL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCHHHHH
AKSVFLEEQPEEFIESKEEDSMEMDNEAVNLFLSEIQEDIDSLEEAIGLDSSKDNSEKIT
HHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
EDAYSLIEGMTNIPLIANALQEGLRGVYHSREIDFVEKVVVLDSCQIHQKALMHLQETLM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEVDRLDFSLVERLNILARMENEKHAF
HHHHHCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA